Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000211g0060 Nicotiana tabacum HOM05D003429 ORTHO05D003873 0.0e+00 1150.6 589 100.0
Peaxi162Scf00139g01028 Petunia axillaris HOM05D003429 ORTHO05D003873 1.7e-273 945.7 598 84.6
Solyc01g056520.3 Solanum lycopersicum HOM05D003429 ORTHO05D003873 7.6e-269 930.2 607 81.7
Sopen01g020360 Solanum pennellii HOM05D003429 ORTHO05D003873 1.3e-268 929.5 607 81.4
Nitab4.5_0002094g0090 Nicotiana tabacum HOM05D003429 ORTHO05D003873 1.0e-252 876.7 522 88.7
CSS0009838 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 1.7e-215 753.1 614 65.8
Thecc.10G129100 Theobroma cacao HOM05D003429 ORTHO05D003873 5.3e-214 748.0 613 66.6
Gorai.011G224400 Gossypium raimondii HOM05D003429 ORTHO05D003873 7.0e-214 747.7 613 66.2
Gohir.D10G200200 Gossypium hirsutum HOM05D003429 ORTHO05D003873 2.7e-213 745.7 613 66.1
CANSAT56G3732 Cannabis sativa HOM05D003429 ORTHO05D003873 3.5e-213 745.3 613 65.6
Dinv03754 Davidia involucrata HOM05D003429 ORTHO05D003873 5.9e-213 744.6 613 66.4
Prupe.2G051400 Prunus persica HOM05D003429 ORTHO05D003873 1.3e-212 743.4 614 65.6
Gohir.A10G192300 Gossypium hirsutum HOM05D003429 ORTHO05D003873 2.2e-212 742.7 613 66.1
Duzib114G0344 Durio zibethinus HOM05D003429 ORTHO05D003873 6.5e-212 741.1 613 65.7
FvH4_7g04530 Fragaria vesca HOM05D003429 ORTHO05D003873 1.9e-211 739.6 613 65.6
RcHm_v2.0_Chr1g0329811 Rosa chinensis HOM05D003429 ORTHO05D003873 3.2e-211 738.8 613 65.6
Duzib128G2024 Durio zibethinus HOM05D003429 ORTHO05D003873 4.2e-211 738.4 613 65.9
CiPaw.13G018300 Carya illinoinensis HOM05D003429 ORTHO05D003873 5.5e-211 738.0 613 66.1
Prupe.2G050900 Prunus persica HOM05D003429 ORTHO05D003873 7.2e-211 737.6 613 65.7
FAN03G0932 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.2e-210 736.9 613 65.3
FAN06G0150 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.2e-210 736.9 613 65.3
FAN06G3547 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.2e-210 736.9 613 65.3
Lj1g0005148 Lotus japonicus HOM05D003429 ORTHO05D003873 1.2e-210 736.9 613 66.2
GSVIVG01012453001 Vitis vinifera HOM05D003429 ORTHO05D003873 1.6e-210 736.5 613 65.7
TPR.G38508 Trifolium pratense HOM05D003429 ORTHO05D003873 2.1e-210 736.1 612 65.0
PGR031G2936 Punica granatum HOM05D003429 ORTHO05D003873 3.6e-210 735.3 613 65.6
Eucgr.G03181 Eucalyptus grandis HOM05D003429 ORTHO05D003873 4.7e-210 734.9 613 65.4
Actinidia17975 Actinidia chinensis HOM05D003429 ORTHO05D003873 6.1e-210 734.6 614 63.7
Glyma.04G003000 Glycine max HOM05D003429 ORTHO05D003873 6.1e-210 734.6 613 65.4
Actinidia37867 Actinidia chinensis HOM05D003429 ORTHO05D003873 1.0e-209 733.8 614 63.4
MD07G1118000 Malus domestica HOM05D003429 ORTHO05D003873 1.4e-209 733.4 613 65.1
MD02G1207800 Malus domestica HOM05D003429 ORTHO05D003873 2.3e-209 732.6 613 64.9
MBI19_g25231_MAGBIO Magnolia biondii HOM05D003429 ORTHO05D003873 3.0e-209 732.3 614 65.1
Manes.04G153600 Manihot esculenta HOM05D003429 ORTHO05D003873 4.0e-209 731.9 613 63.8
Medtr3g118040 Medicago truncatula HOM05D003429 ORTHO05D003873 2.6e-208 729.2 612 65.2
Dinv04984 Davidia involucrata HOM05D003429 ORTHO05D003873 3.4e-208 728.8 613 65.3
HanXRQChr16g0510451 Helianthus annuus HOM05D003429 ORTHO05D003873 3.4e-208 728.8 613 64.3
arahy.Tifrunner.gnm1.ann1.P7SNS1 Arachis hypogaea HOM05D003429 ORTHO05D003873 4.4e-208 728.4 613 64.8
Ciclev10000149m.g Citrus clementina HOM05D003429 ORTHO05D003873 7.5e-208 727.6 613 64.6
FAN01G2134 Fragaria x ananassa HOM05D003429 ORTHO05D003873 7.5e-208 727.6 613 65.1
TAR629G1055 Trochodendron aralioides HOM05D003429 ORTHO05D003873 7.5e-208 727.6 614 64.5
CsaV3_6G035760 Cucumis sativus L. HOM05D003429 ORTHO05D003873 9.8e-208 727.2 612 65.0
Phvul.009G118700 Phaseolus vulgaris HOM05D003429 ORTHO05D003873 2.2e-207 726.1 613 64.9
VMungo1309G0597 Vigna mungo HOM05D003429 ORTHO05D003873 3.7e-207 725.3 613 64.8
Lalb_Chr11g0061181 Lupinus albus HOM05D003429 ORTHO05D003873 1.1e-206 723.8 613 64.8
Atru.chr12.1194 Acer truncatum HOM05D003429 ORTHO05D003873 1.4e-206 723.4 612 64.7
Potri.001G036100 Populus trichocarpa HOM05D003429 ORTHO05D003873 2.4e-206 722.6 612 63.7
Sed0026988 Sechium edule HOM05D003429 ORTHO05D003873 2.4e-206 722.6 613 65.1
Glyma.06G003000 Glycine max HOM05D003429 ORTHO05D003873 3.1e-206 722.2 613 64.6
Lsat_1_v5_gn_1_118001 Lactuca sativa HOM05D003429 ORTHO05D003873 3.1e-206 722.2 613 63.6
MELO3C011384.2 Cucumis melo HOM05D003429 ORTHO05D003873 5.4e-206 721.5 613 64.9
PSO384G1706 Papaver somniferum HOM05D003429 ORTHO05D003873 9.1e-206 720.7 614 63.5
vmacro07588 Vaccinium macrocarpon HOM05D003429 ORTHO05D003873 2.0e-205 719.5 622 62.4
Psat5g001960 Pisum sativum HOM05D003429 ORTHO05D003873 5.9e-205 718.0 612 63.9
ECA248G1206 Erigeron canadensis HOM05D003429 ORTHO05D003873 1.0e-204 717.2 613 63.9
Manes.11G010000 Manihot esculenta HOM05D003429 ORTHO05D003873 1.0e-204 717.2 639 61.7
PSO339G2530 Papaver somniferum HOM05D003429 ORTHO05D003873 3.8e-204 715.3 614 63.5
Potri.003G189500 Populus trichocarpa HOM05D003429 ORTHO05D003873 3.8e-204 715.3 612 63.2
Sc09g0004760 Simmondsia chinensis HOM05D003429 ORTHO05D003873 5.0e-204 714.9 613 63.1
TWI63G1019 Tripterygium wilfordii HOM05D003429 ORTHO05D003873 1.5e-203 713.4 614 64.2
ATR0782G154 Amborella trichopoda HOM05D003429 ORTHO05D003873 2.5e-203 712.6 614 63.2
Aqoxy5G00851 Aquilegia oxysepala HOM05D003429 ORTHO05D003873 3.3e-203 712.2 612 63.1
AL6G16070 Arabidopsis lyrata HOM05D003429 ORTHO05D003873 1.2e-202 710.3 613 62.6
AT5G06120 Arabidopsis thaliana HOM05D003429 ORTHO05D003873 1.2e-202 710.3 613 62.5
Hund06843 Selenicereus undatus HOM05D003429 ORTHO05D003873 3.6e-202 708.8 613 62.6
arahy.Tifrunner.gnm1.ann1.3RNG04 Arachis hypogaea HOM05D003429 ORTHO05D003873 8.0e-202 707.6 656 60.8
FAN10G0722 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.8e-201 706.4 698 57.7
QL04p022427 Quercus lobata HOM05D003429 ORTHO05D003873 1.8e-201 706.4 520 71.7
Cfa010982 Carpinus fangiana HOM05D003429 ORTHO05D003873 8.9e-201 704.1 520 71.9
AUR62041296 Chenopodium quinoa HOM05D003429 ORTHO05D003873 1.5e-200 703.4 613 62.2
BraA02t04869Z Brassica rapa HOM05D003429 ORTHO05D003873 2.0e-200 703.0 614 61.4
AUR62035521 Chenopodium quinoa HOM05D003429 ORTHO05D003873 2.0e-200 703.0 613 62.3
THA.LOC104816588 Tarenaya hassleriana HOM05D003429 ORTHO05D003873 2.0e-200 703.0 613 62.3
MSTRG.20488 Avicennia marina HOM05D003429 ORTHO05D003873 3.4e-200 702.2 613 62.5
C02p02580 Brassica napus HOM05D003429 ORTHO05D003873 5.7e-200 701.4 614 61.4
BolC2t06224H Brassica oleracea HOM05D003429 ORTHO05D003873 5.7e-200 701.4 614 61.4
Migut.B01173 Erythranthe guttata HOM05D003429 ORTHO05D003873 1.7e-199 699.9 613 62.0
Sabra01G0025100 Salix brachista HOM05D003429 ORTHO05D003873 2.8e-199 699.1 646 59.9
Aqoxy1G01517 Aquilegia oxysepala HOM05D003429 ORTHO05D003873 4.9e-199 698.4 612 61.8
Sp6g36790 Schrenkiella parvula HOM05D003429 ORTHO05D003873 6.3e-199 698.0 613 61.8
Carub.0006s0499 Capsella rubella HOM05D003429 ORTHO05D003873 8.3e-199 697.6 613 61.5
BcaB05g21683 Brassica carinata HOM05D003429 ORTHO05D003873 5.4e-198 694.9 614 61.2
Cc00_g07020 Coffea canephora HOM05D003429 ORTHO05D003873 1.6e-197 693.3 613 61.3
Thhalv10012516m.g Eutrema salsugineum HOM05D003429 ORTHO05D003873 2.7e-197 692.6 613 61.7
Nn7g37083 Nelumbo nucifera HOM05D003429 ORTHO05D003873 4.5e-197 691.8 521 70.6
THA.LOC104826824 Tarenaya hassleriana HOM05D003429 ORTHO05D003873 4.5e-197 691.8 613 61.0
HPP92_028707 Vanilla planifolia HOM05D003429 ORTHO05D003873 5.9e-197 691.4 614 61.2
EL10Ac4g08832 Beta vulgaris HOM05D003429 ORTHO05D003873 1.3e-196 690.3 613 62.2
Aa31LG11G7100 Aethionema arabicum HOM05D003429 ORTHO05D003873 1.5e-195 686.8 608 60.9
unitig_22.g5335 Utricularia gibba HOM05D003429 ORTHO05D003873 3.3e-195 685.6 613 60.7
GSVIVG01025856001 Vitis vinifera HOM05D003429 ORTHO05D003873 4.7e-194 681.8 614 59.9
SGA_v2.0_scaffold164G38141 Striga asiatica HOM05D003429 ORTHO05D003873 4.0e-193 678.7 632 59.0
C09p70720 Brassica napus HOM05D003429 ORTHO05D003873 1.7e-191 673.3 613 59.5
BraA10t45069Z Brassica rapa HOM05D003429 ORTHO05D003873 6.4e-191 671.4 613 59.5
A10p30310 Brassica napus HOM05D003429 ORTHO05D003873 1.8e-190 669.8 613 59.5
BolC9t59828H Brassica oleracea HOM05D003429 ORTHO05D003873 2.4e-190 669.5 613 59.4
BcaC06g32321 Brassica carinata HOM05D003429 ORTHO05D003873 3.2e-190 669.1 613 59.2
DCAR_013522 Daucus carota HOM05D003429 ORTHO05D003873 3.0e-188 662.5 614 58.5
Oeu013041.2 Olea europaea HOM05D003429 ORTHO05D003873 3.0e-188 662.5 657 56.5
TWI53G2015 Tripterygium wilfordii HOM05D003429 ORTHO05D003873 8.6e-188 661.0 614 58.3
RhsimUnG0020700 Rhododendron simsii HOM05D003429 ORTHO05D003873 1.1e-187 660.6 614 59.9
SalBow5G1634 Salvia bowleyana HOM05D003429 ORTHO05D003873 2.5e-187 659.4 619 59.3
Zm00001eb278500 Zea mays HOM05D003429 ORTHO05D003873 2.5e-187 659.4 614 58.1
Medtr1g051125 Medicago truncatula HOM05D003429 ORTHO05D003873 4.7e-186 655.2 614 56.7
Glyma.10G104900 Glycine max HOM05D003429 ORTHO05D003873 1.8e-185 653.3 601 56.9
Pp3c5_25430 Physcomitrium patens HOM05D003429 ORTHO05D003873 3.4e-184 649.0 614 56.0
Pp3c5_25610 Physcomitrium patens HOM05D003429 ORTHO05D003873 9.8e-184 647.5 614 56.2
TPR.G13799 Trifolium pratense HOM05D003429 ORTHO05D003873 1.4e-182 643.7 613 55.5
QL07p014239 Quercus lobata HOM05D003429 ORTHO05D003873 1.3e-180 637.1 731 51.0
Lalb_Chr02g0156721 Lupinus albus HOM05D003429 ORTHO05D003873 7.3e-179 631.3 614 56.2
Phvul.007G243600 Phaseolus vulgaris HOM05D003429 ORTHO05D003873 3.4e-176 622.5 615 55.3
Hund24514 Selenicereus undatus HOM05D003429 ORTHO05D003873 9.9e-176 620.9 616 55.4
CBR_g30950 Chara braunii HOM05D003429 ORTHO05D003873 3.5e-173 612.5 614 54.1
Sc13g0000830 Simmondsia chinensis HOM05D003429 ORTHO05D003873 1.1e-169 600.9 613 54.2
Mapoly0017s0001 Marchantia polymorpha HOM05D003429 ORTHO05D003873 4.1e-166 589.0 615 52.5
MapolyY_B0019 Marchantia polymorpha HOM05D003429 ORTHO05D003873 4.1e-166 589.0 614 52.0
Ca_15294_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 1.7e-164 583.6 639 53.5
SMO367G0627 Selaginella moellendorffii HOM05D003429 ORTHO05D003873 2.3e-164 583.2 615 51.4
HPP92_028456 Vanilla planifolia HOM05D003429 ORTHO05D003873 2.1e-162 576.6 521 61.2
Cpa.g.sc33.148 Carica papaya HOM05D003429 ORTHO05D003873 2.2e-159 566.6 621 53.9
Lj9A653G52 Lonicera japonica HOM05D003429 ORTHO05D003873 1.4e-145 520.8 453 62.3
Os03g0616700 Oryza sativa ssp. japonica HOM05D003429 ORTHO05D003873 4.5e-144 515.8 503 56.1
DCAR_022673 Daucus carota HOM05D003429 ORTHO05D003873 5.5e-142 508.8 493 58.0
PRCOL_00000821 Prasinoderma coloniale HOM05D003429 ORTHO05D003873 5.3e-137 492.3 621 44.6
AUR62018433 Chenopodium quinoa HOM05D003429 ORTHO05D003873 2.2e-135 486.9 522 53.3
MCO13G155 Micromonas commoda HOM05D003429 ORTHO05D003873 2.9e-135 486.5 621 44.8
Haze_02954 Corylus avellana HOM05D003429 ORTHO05D003873 1.4e-134 484.2 624 48.6
EL10Ac3g07341 Beta vulgaris HOM05D003429 ORTHO05D003873 8.8e-116 421.8 522 48.7
vmacro07757 Vaccinium macrocarpon HOM05D003429 ORTHO05D003873 2.4e-113 413.7 421 56.1
CDE07G0287 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 4.2e-110 402.9 379 58.0
CARHR206820 Cardamine hirsuta HOM05D003429 ORTHO05D003873 1.1e-105 388.3 399 55.1
Psat6g086480 Pisum sativum HOM05D003429 ORTHO05D003873 1.4e-105 387.9 412 52.9
CAN.G114.9 Capsicum annuum HOM05D003429 ORTHO05D003873 7.2e-94 349.0 378 56.6
Actinidia13982 Actinidia chinensis HOM05D003429 ORTHO05D003873 3.0e-92 343.6 268 67.2
VMungo0720G0379 Vigna mungo HOM05D003429 ORTHO05D003873 6.3e-90 335.9 471 42.5
SHI11319 Sapria himalayana HOM05D003429 ORTHO05D003873 2.0e-88 330.9 285 60.7
Actinidia14028 Actinidia chinensis HOM05D003429 ORTHO05D003873 1.3e-82 311.6 260 62.7
Ca_28163_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 2.8e-69 267.3 246 57.3
Ca_14865_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 2.6e-67 260.8 202 60.9
CDE07G0955 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 2.9e-66 257.3 235 60.0
AUR62021000 Chenopodium quinoa HOM05D003429 ORTHO05D003873 5.4e-65 253.1 238 55.5
Oeu055890.1 Olea europaea HOM05D003429 ORTHO05D003873 5.1e-63 246.5 159 76.1
AUR62020999 Chenopodium quinoa HOM05D003429 ORTHO05D003873 1.2e-61 241.9 254 52.8
Ca_14866_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 5.2e-60 236.5 326 45.7
Psat6g086560 Pisum sativum HOM05D003429 ORTHO05D003873 3.5e-56 223.8 172 62.2
Psat6g056200 Pisum sativum HOM05D003429 ORTHO05D003873 4.6e-40 170.2 187 51.9
Haze_02953 Corylus avellana HOM05D003429 ORTHO05D003873 1.6e-37 161.8 173 55.5
Actinidia14027 Actinidia chinensis HOM05D003429 ORTHO05D003873 9.0e-36 156.0 141 60.3
Cre19.g751347 Chlamydomonas reinhardtii HOM05D003429 ORTHO05D003873 7.6e-35 152.9 176 44.3
Rhsim09G0101900 Rhododendron simsii HOM05D003429 ORTHO05D003873 5.1e-31 140.2 202 44.6
VMungo0720G3126 Vigna mungo HOM05D003429 ORTHO05D003873 4.3e-30 137.1 167 47.9
SEGI_27821 Sequoiadendron giganteum HOM05D003429 ORTHO05D003873 4.8e-29 133.7 89 74.2
Actinidia13983 Actinidia chinensis HOM05D003429 ORTHO05D003873 2.6e-27 127.9 120 55.8
CSS0014542 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 3.0e-23 114.4 99 64.6
Cre02.g141506 Chlamydomonas reinhardtii HOM05D003429 ORTHO05D003873 1.1e-22 112.5 199 36.7
QL04p023522 Quercus lobata HOM05D003429 ORTHO05D003873 2.5e-22 111.3 67 80.6
CSS0035788 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 7.4e-22 109.8 100 62.0
CSS0005611 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 6.9e-20 103.2 125 52.8
CSS0025796 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 1.4e-17 95.5 89 61.8
CSS0012854 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 7.9e-16 89.7 93 58.1
CSS0044643 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 6.9e-12 76.6 111 46.8
CSS0020186 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 2.6e-11 74.7 111 45.9
SEGI_15232 Sequoiadendron giganteum HOM05D003429 ORTHO05D003873 5.5e-09 67.0 52 61.5
Nn1g02902 Nelumbo nucifera HOM05D003429 ORTHO05D003873 1.8e-07 62.0 49 61.2
QL04p022451 Quercus lobata HOM05D003429 ORTHO05D003873 3.9e-07 60.8 52 59.6
HPP92_028715 Vanilla planifolia HOM05D003429 ORTHO05D003873 4.3e-06 57.4 46 56.5
QL04p043590 Quercus lobata HOM05D001978 ORTHO05D003036 5.7e-06 57.0 63 54.0


User provided reference genes

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