Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000207g0420 Nicotiana tabacum HOM05D002799 ORTHO05D008889 4.7e-106 387.9 198 100.0
Nitab4.5_0002229g0090 Nicotiana tabacum HOM05D002799 ORTHO05D008889 7.1e-102 374.0 198 96.0
Sopen10g002540 Solanum pennellii HOM05D002799 ORTHO05D008889 9.6e-91 337.0 198 83.3
CAN.G1110.21 Capsicum annuum HOM05D002799 ORTHO05D008889 1.4e-89 333.2 198 83.8
PGSC0003DMG400024993 Solanum tuberosum HOM05D002799 ORTHO05D008889 6.6e-84 314.3 182 86.3
Peaxi162Scf00257g00081 Petunia axillaris HOM05D002799 ORTHO05D008889 2.1e-74 282.7 157 91.1
Haze_00591 Corylus avellana HOM05D002799 ORTHO05D008889 1.8e-68 263.1 180 73.3
Cc05_g12950 Coffea canephora HOM05D002799 ORTHO05D008889 1.9e-67 259.6 176 72.7
CiPaw.05G237000 Carya illinoinensis HOM05D002799 ORTHO05D008889 3.3e-67 258.8 182 70.3
Manes.08G164500 Manihot esculenta HOM05D002799 ORTHO05D008889 1.6e-66 256.5 179 71.5
Solyc10g006600.4 Solanum lycopersicum HOM05D002799 ORTHO05D008889 3.7e-66 255.4 141 88.7
Actinidia08736 Actinidia chinensis HOM05D002799 ORTHO05D008889 8.1e-66 254.2 176 71.6
QL09p025834 Quercus lobata HOM05D002799 ORTHO05D008889 1.1e-65 253.8 180 71.1
Dinv29173 Davidia involucrata HOM05D002799 ORTHO05D008889 1.8e-65 253.1 182 68.7
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 2.4e-65 252.7 179 68.7
DCAR_010548 Daucus carota HOM05D002799 ORTHO05D008889 4.0e-65 251.9 174 70.7
MSTRG.17884 Avicennia marina HOM05D002799 ORTHO05D008889 5.3e-65 251.5 176 71.0
FvH4_7g33591 Fragaria vesca HOM05D002799 ORTHO05D008889 9.0e-65 250.8 177 68.4
Rhsim03G0220500 Rhododendron simsii HOM05D000526 ORTHO05D000956 1.2e-64 250.4 183 68.3
Migut.M01834 Erythranthe guttata HOM05D002799 ORTHO05D008889 2.0e-64 249.6 176 68.8
Prupe.2G323800 Prunus persica HOM05D002799 ORTHO05D008889 2.6e-64 249.2 180 68.3
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 3.4e-64 248.8 179 67.6
FvH4_7g33580 Fragaria vesca HOM05D002799 ORTHO05D008889 4.5e-64 248.4 177 67.8
TAR629G0193 Trochodendron aralioides HOM05D002799 ORTHO05D008889 4.5e-64 248.4 180 68.3
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 5.8e-64 248.1 179 67.6
Thecc.04G001600 Theobroma cacao HOM05D002799 ORTHO05D008889 1.7e-63 246.5 181 67.4
RcHm_v2.0_Chr1g0383841 Rosa chinensis HOM05D002799 ORTHO05D008889 2.9e-63 245.7 177 67.2
CSS0012005 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 1.1e-62 243.8 180 66.7
CSS0036576 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 1.1e-62 243.8 180 66.7
Gohir.D11G175400 Gossypium hirsutum HOM05D002799 ORTHO05D008889 1.9e-62 243.0 180 68.3
Gorai.007G188000 Gossypium raimondii HOM05D002799 ORTHO05D008889 1.9e-62 243.0 180 68.3
Sabra19G0057600 Salix brachista HOM05D002799 ORTHO05D008889 7.1e-62 241.1 181 65.7
Gohir.A11G169200 Gossypium hirsutum HOM05D002799 ORTHO05D008889 1.2e-61 240.4 180 67.8
TWI60G0329 Tripterygium wilfordii HOM05D002799 ORTHO05D008889 1.6e-61 240.0 172 68.0
GSVIVG01024450001 Vitis vinifera HOM05D002799 ORTHO05D008889 3.5e-61 238.8 182 64.3
Eucgr.K03383 Eucalyptus grandis HOM05D002799 ORTHO05D008889 6.0e-61 238.0 181 65.2
MD07G1305700 Malus domestica HOM05D002799 ORTHO05D008889 7.9e-61 237.7 178 68.0
ECA236G2689 Erigeron canadensis HOM05D002799 ORTHO05D008889 1.3e-60 236.9 178 66.3
Ciclev10032834m.g Citrus clementina HOM05D002799 ORTHO05D008889 1.8e-60 236.5 181 65.7
Oeu053393.1 Olea europaea HOM05D002799 ORTHO05D008889 2.3e-60 236.1 159 72.3
CANSAT21G1155 Cannabis sativa HOM05D002799 ORTHO05D008889 5.1e-60 235.0 171 68.4
Potri.019G048200 Populus trichocarpa HOM05D002799 ORTHO05D008889 8.7e-60 234.2 174 64.9
Lalb_Chr09g0335071 Lupinus albus HOM05D002799 ORTHO05D008889 1.9e-59 233.0 168 67.3
arahy.Tifrunner.gnm1.ann1.LMI616 Arachis hypogaea HOM05D002799 ORTHO05D008889 9.6e-59 230.7 178 62.9
Nn1g02011 Nelumbo nucifera HOM05D002799 ORTHO05D008889 9.6e-59 230.7 180 65.0
THA.LOC104803694 Tarenaya hassleriana HOM05D002799 ORTHO05D008889 1.3e-58 230.3 177 62.7
arahy.Tifrunner.gnm1.ann1.10QB4Z Arachis hypogaea HOM05D002799 ORTHO05D008889 3.7e-58 228.8 177 63.3
Medtr8g063470 Medicago truncatula HOM05D002799 ORTHO05D008889 3.7e-58 228.8 178 63.5
vmacro06499 Vaccinium macrocarpon HOM05D002799 ORTHO05D008889 3.7e-58 228.8 156 71.8
arahy.Tifrunner.gnm1.ann1.B4EAVD Arachis hypogaea HOM05D002799 ORTHO05D008889 6.3e-58 228.0 178 62.4
arahy.Tifrunner.gnm1.ann1.31RF02 Arachis hypogaea HOM05D002799 ORTHO05D008889 8.2e-58 227.6 177 63.3
unitig_746.g26651 Utricularia gibba HOM05D002799 ORTHO05D008889 1.4e-57 226.9 186 61.3
SGA_v2.0_scaffold70G23573 Striga asiatica HOM05D002799 ORTHO05D008889 2.0e-56 223.0 169 65.1
TPR.G670 Trifolium pratense HOM05D002799 ORTHO05D008889 2.6e-56 222.6 171 62.6
Atru.chr12.2012 Acer truncatum HOM05D002799 ORTHO05D008889 4.5e-56 221.9 192 58.3
AL3G49530 Arabidopsis lyrata HOM05D002799 ORTHO05D008889 1.0e-55 220.7 175 61.7
Carub.0003s3061 Capsella rubella HOM05D002799 ORTHO05D008889 2.2e-55 219.5 181 60.2
Sed0001745 Sechium edule HOM05D002799 ORTHO05D008889 5.0e-55 218.4 170 65.3
Glyma.18G134600 Glycine max HOM05D002799 ORTHO05D008889 6.5e-55 218.0 170 63.5
AT2G16790 Arabidopsis thaliana HOM05D002799 ORTHO05D008889 1.1e-54 217.2 179 59.8
BcaC04g23004 Brassica carinata HOM05D002799 ORTHO05D008889 3.2e-54 215.7 181 58.6
C09p13130 Brassica napus HOM05D002799 ORTHO05D008889 3.2e-54 215.7 181 58.6
CARHR107040 Cardamine hirsuta HOM05D002799 ORTHO05D008889 4.2e-54 215.3 179 58.7
Glyma.08G289900 Glycine max HOM05D002799 ORTHO05D008889 4.2e-54 215.3 170 62.9
A09p11140 Brassica napus HOM05D002799 ORTHO05D008889 5.5e-54 214.9 177 59.3
Lj1P1032T28 Lonicera japonica HOM05D002799 ORTHO05D008889 5.5e-54 214.9 155 69.0
BcaB07g31750 Brassica carinata HOM05D002799 ORTHO05D008889 7.2e-54 214.5 181 59.1
MELO3C005426.2 Cucumis melo HOM05D002799 ORTHO05D008889 3.5e-53 212.2 174 61.5
VMungo0251G2787 Vigna mungo HOM05D002799 ORTHO05D008889 3.5e-53 212.2 170 61.8
Phvul.003G054200 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 7.9e-53 211.1 176 60.2
BraA09t36756Z Brassica rapa HOM05D002799 ORTHO05D008889 1.0e-52 210.7 171 59.6
Lsat_1_v5_gn_8_74380 Lactuca sativa HOM05D002799 ORTHO05D008889 1.3e-52 210.3 178 57.3
Lsat_1_v5_gn_5_146100 Lactuca sativa HOM05D002799 ORTHO05D008889 1.8e-52 209.9 175 58.3
Phvul.003G053900 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 2.3e-52 209.5 176 59.7
Sp3g29930 Schrenkiella parvula HOM05D002799 ORTHO05D008889 3.9e-52 208.8 180 57.8
AUR62028150 Chenopodium quinoa HOM05D002799 ORTHO05D008889 8.7e-52 207.6 177 58.8
CsaV3_5G005340 Cucumis sativus L. HOM05D002799 ORTHO05D008889 1.1e-51 207.2 166 63.3
BolC9t54208H Brassica oleracea HOM05D002799 ORTHO05D008889 3.3e-51 205.7 169 59.8
Thhalv10022876m.g Eutrema salsugineum HOM05D002799 ORTHO05D008889 4.3e-51 205.3 170 61.8
Duzib133G0126 Durio zibethinus HOM05D002799 ORTHO05D008889 5.7e-51 204.9 157 65.6
Lj4g0019925 Lotus japonicus HOM05D002799 ORTHO05D008889 1.6e-50 203.4 157 61.1
Aa31LG8G14030 Aethionema arabicum HOM05D002799 ORTHO05D008889 2.8e-50 202.6 171 56.7
Ah.04g157280 Amaranthus hybridus HOM05D002799 ORTHO05D008889 8.2e-50 201.1 175 56.6
EL10Ac3g05099 Beta vulgaris HOM05D002799 ORTHO05D008889 1.1e-49 200.7 170 57.6
Nn3g19277 Nelumbo nucifera HOM05D002799 ORTHO05D008889 1.4e-49 200.3 152 62.5
Os06g0114650 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D008889 3.2e-46 189.1 170 57.1
PSO717G0064 Papaver somniferum HOM05D002799 ORTHO05D008889 1.4e-44 183.7 192 52.6
PSO675G5486 Papaver somniferum HOM05D002799 ORTHO05D008889 6.7e-44 181.4 191 52.4
Aqoxy7G00884 Aquilegia oxysepala HOM05D002799 ORTHO05D008889 1.7e-42 176.8 132 65.2
ATR0829G224 Amborella trichopoda HOM05D002799 ORTHO05D008889 4.8e-42 175.3 189 49.7
COL.COLO4_19775 Corchorus olitorius HOM05D002799 ORTHO05D008889 8.2e-42 174.5 131 65.6
ClCG01G005050 Citrullus lanatus HOM05D002799 ORTHO05D008889 1.0e-39 167.5 134 62.7
Sc19g0000240 Simmondsia chinensis HOM05D002799 ORTHO05D008889 1.3e-39 167.2 131 59.5
Ca_14681_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 6.5e-39 164.9 128 61.7
AagrBONN_evm.TU.Sc2ySwM_362.1504 Anthoceros agrestis HOM05D002799 ORTHO05D008889 1.4e-38 163.7 180 47.2
Psat4g127040 Pisum sativum HOM05D002799 ORTHO05D008889 4.2e-38 162.2 128 60.2
TPR.G26908 Trifolium pratense HOM05D002799 ORTHO05D008889 4.2e-38 162.2 127 62.2
Mapoly0046s0106 Marchantia polymorpha HOM05D002799 ORTHO05D008889 7.2e-38 161.4 175 48.6
PGR004G1571 Punica granatum HOM05D002799 ORTHO05D008889 3.6e-37 159.1 129 62.0
Pp3c5_2750 Physcomitrium patens HOM05D002799 ORTHO05D008889 9.7e-35 151.0 196 44.9
Rhsim03G0164800 Rhododendron simsii HOM05D002799 ORTHO05D008889 7.0e-33 144.8 103 70.9
MD01G1233600 Malus domestica HOM05D002799 ORTHO05D008889 5.0e-31 138.7 98 68.4
SMO174G0264 Selaginella moellendorffii HOM05D002799 ORTHO05D008889 1.1e-30 137.5 153 47.7
PSO675G4133 Papaver somniferum HOM05D002799 ORTHO05D008889 1.7e-26 123.6 152 46.1
HPP92_002455 Vanilla planifolia HOM05D002799 ORTHO05D008889 7.7e-24 114.8 168 39.3
SHI03438 Sapria himalayana HOM05D002799 ORTHO05D008889 2.2e-23 113.2 128 46.1
Cre08.g385750 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D008889 4.0e-20 102.4 172 37.2
PRCOL_00003203 Prasinoderma coloniale HOM05D002799 ORTHO05D008889 1.4e-17 94.0 173 37.0
BcaB03g16409 Brassica carinata HOM05D002799 ORTHO05D008889 2.4e-17 93.2 106 48.1
C07p06790 Brassica napus HOM05D002799 ORTHO05D008889 4.1e-17 92.4 132 41.7
MCO08G110 Micromonas commoda HOM05D002799 ORTHO05D008889 1.3e-15 87.4 156 37.8
Ca_28676_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 2.1e-13 80.1 158 34.8
Cfa026682 Carpinus fangiana HOM05D002799 ORTHO05D008889 8.8e-12 74.7 149 33.6
HanXRQChr10g0305151 Helianthus annuus HOM05D002799 ORTHO05D008889 4.1e-09 65.9 48 60.4
Zm00001eb177740 Zea mays HOM05D002799 ORTHO05D008889 2.5e-06 56.6 43 60.5


User provided reference genes

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