Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000207g0390 Nicotiana tabacum HOM05D000364 ORTHO05D000235 1.8e-168 595.9 315 100.0
Nitab4.5_0002229g0010 Nicotiana tabacum HOM05D000364 ORTHO05D000235 6.3e-129 464.5 329 80.2
PGSC0003DMG400025020 Solanum tuberosum HOM05D000364 ORTHO05D000235 2.2e-44 183.7 289 48.8
Solyc10g006640.3 Solanum lycopersicum HOM05D000364 ORTHO05D000235 3.6e-39 166.4 287 47.7
Sopen10g002570 Solanum pennellii HOM05D000364 ORTHO05D000235 3.6e-39 166.4 287 47.7
Lj1A859T22 Lonicera japonica HOM05D000364 ORTHO05D000235 1.8e-38 164.1 323 40.9
PGSC0003DMG400019236 Solanum tuberosum HOM05D000364 ORTHO05D000235 3.9e-38 162.9 422 39.3
Solyc07g063830.3 Solanum lycopersicum HOM05D000364 ORTHO05D000235 8.2e-36 155.2 416 37.0
Cc05_g12920 Coffea canephora HOM05D000364 ORTHO05D000235 1.4e-35 154.5 338 36.1
Nitab4.5_0000552g0130 Nicotiana tabacum HOM05D000364 ORTHO05D000235 4.5e-34 149.4 394 38.1
Sopen07g031930 Solanum pennellii HOM05D000364 ORTHO05D000235 7.7e-34 148.7 419 37.9
Peaxi162Scf01574g00026 Petunia axillaris HOM05D000364 ORTHO05D000235 2.5e-32 143.7 368 37.2
Cfa020475 Carpinus fangiana HOM05D000364 ORTHO05D000235 4.2e-32 142.9 392 34.2
Oeu053395.1 Olea europaea HOM05D000364 ORTHO05D000235 1.6e-31 141.0 288 39.9
CSS0030308 Camellia sinensis var. sinensis HOM05D000364 ORTHO05D000235 2.1e-31 140.6 402 33.3
MSTRG.12941 Avicennia marina HOM05D000364 ORTHO05D000235 6.7e-30 135.6 329 34.7
MSTRG.6871 Avicennia marina HOM05D000364 ORTHO05D000235 6.7e-30 135.6 393 33.1
Dinv22335 Davidia involucrata HOM05D000364 ORTHO05D000235 6.7e-30 135.6 398 32.7
MD03G1216400 Malus domestica HOM05D000364 ORTHO05D000235 8.8e-30 135.2 400 33.2
CiPaw.11G179900 Carya illinoinensis HOM05D000364 ORTHO05D000235 3.3e-29 133.3 336 33.3
Actinidia05158 Actinidia chinensis HOM05D000364 ORTHO05D000235 5.7e-29 132.5 300 38.0
Nitab4.5_0001429g0020 Nicotiana tabacum HOM05D000364 ORTHO05D000235 9.7e-29 131.7 330 38.2
Haze_09567 Corylus avellana HOM05D000364 ORTHO05D000235 1.7e-28 131.0 392 33.4
RcHm_v2.0_Chr5g0036871 Rosa chinensis HOM05D000364 ORTHO05D000235 2.2e-28 130.6 404 33.7
Migut.M01838 Erythranthe guttata HOM05D000364 ORTHO05D000235 8.2e-28 128.6 347 36.9
MD11G1230700 Malus domestica HOM05D000364 ORTHO05D000235 1.4e-27 127.9 401 33.4
MSTRG.15181 Avicennia marina HOM05D000364 ORTHO05D000235 2.4e-27 127.1 380 32.9
Potri.011G129500 Populus trichocarpa HOM05D000364 ORTHO05D000235 2.4e-27 127.1 396 31.1
Sabra11G0116900 Salix brachista HOM05D000364 ORTHO05D000235 4.1e-27 126.3 323 33.1
Actinidia09941 Actinidia chinensis HOM05D000364 ORTHO05D000235 7.0e-27 125.6 214 43.5
Cpa.g.sc12.1 Carica papaya HOM05D000364 ORTHO05D000235 7.0e-27 125.6 337 33.5
Prupe.4G196600 Prunus persica HOM05D000364 ORTHO05D000235 1.2e-26 124.8 399 33.1
CiPaw.12G124400 Carya illinoinensis HOM05D000364 ORTHO05D000235 2.0e-26 124.0 396 31.6
CSS0049912 Camellia sinensis var. sinensis HOM05D000364 ORTHO05D000235 2.6e-26 123.6 377 33.4
FAN25G0592 Fragaria x ananassa HOM05D000364 ORTHO05D000235 7.7e-26 122.1 403 33.3
QL08p014728 Quercus lobata HOM05D000364 ORTHO05D000235 7.7e-26 122.1 393 32.3
VMungo1080G1268 Vigna mungo HOM05D000364 ORTHO05D000235 7.7e-26 122.1 403 32.0
FAN11G2218 Fragaria x ananassa HOM05D000364 ORTHO05D000235 1.3e-25 121.3 403 32.8
FvH4_3g21440 Fragaria vesca HOM05D000364 ORTHO05D000235 2.2e-25 120.6 403 32.8
FAN16G3716 Fragaria x ananassa HOM05D000364 ORTHO05D000235 2.2e-25 120.6 403 32.3
GSVIVG01014542001 Vitis vinifera HOM05D000364 ORTHO05D000235 2.2e-25 120.6 310 34.5
TAR271G0008 Trochodendron aralioides HOM05D000364 ORTHO05D000235 3.8e-25 119.8 325 35.4
Potri.001G410600 Populus trichocarpa HOM05D000364 ORTHO05D000235 8.5e-25 118.6 320 34.4
CAN.G162.131 Capsicum annuum HOM05D000364 ORTHO05D000235 4.2e-24 116.3 352 37.8
Duzib268G0761 Durio zibethinus HOM05D000364 ORTHO05D000235 4.2e-24 116.3 328 32.6
SalBow7G0334 Salvia bowleyana HOM05D000364 ORTHO05D000235 4.2e-24 116.3 399 34.8
TAR627G0795 Trochodendron aralioides HOM05D000364 ORTHO05D000235 4.2e-24 116.3 325 34.5
FAN21G1614 Fragaria x ananassa HOM05D000364 ORTHO05D000235 7.2e-24 115.5 390 33.1
Manes.15G080500 Manihot esculenta HOM05D000364 ORTHO05D000235 7.2e-24 115.5 329 32.2
Oeu052323.1 Olea europaea HOM05D000364 ORTHO05D000235 9.4e-24 115.2 391 33.2
MBI02_g37286_MAGBIO Magnolia biondii HOM05D000364 ORTHO05D000235 4.7e-23 112.8 317 33.1
Nn1g03779 Nelumbo nucifera HOM05D000364 ORTHO05D000235 1.0e-22 111.7 322 33.9
Thecc.07G058500 Theobroma cacao HOM05D000364 ORTHO05D000235 1.4e-22 111.3 403 30.3
Duzib213G0464 Durio zibethinus HOM05D000364 ORTHO05D000235 1.8e-22 110.9 337 32.3
PGR031G1332 Punica granatum HOM05D000364 ORTHO05D000235 1.8e-22 110.9 371 32.9
Sabra16G0276000 Salix brachista HOM05D000364 ORTHO05D000235 2.3e-22 110.5 369 33.3
Sabra16G0280400 Salix brachista HOM05D000364 ORTHO05D000235 2.3e-22 110.5 369 33.3
Glyma.13G284400 Glycine max HOM05D000364 ORTHO05D000235 3.9e-22 109.8 328 32.9
Phvul.005G089000 Phaseolus vulgaris HOM05D000364 ORTHO05D000235 3.9e-22 109.8 404 29.5
TPR.G33122 Trifolium pratense HOM05D000364 ORTHO05D000235 3.9e-22 109.8 388 32.2
Glyma.12G216800 Glycine max HOM05D000364 ORTHO05D000235 6.7e-22 109.0 325 32.3
Medtr2g081820 Medicago truncatula HOM05D000364 ORTHO05D000235 2.6e-21 107.1 380 31.6
Manes.16G015400 Manihot esculenta HOM05D000364 ORTHO05D000235 5.7e-21 105.9 334 31.1
MSTRG.14397 Avicennia marina HOM05D000364 ORTHO05D000235 1.3e-20 104.8 395 28.6
Hma1.2p1_0905F.1_g235385 Hydrangea macrophylla HOM05D000364 ORTHO05D000235 1.4e-19 101.3 365 29.9
vmacro09589 Vaccinium macrocarpon HOM05D000364 ORTHO05D000235 4.1e-19 99.8 392 30.6
TWI39G0748 Tripterygium wilfordii HOM05D000364 ORTHO05D000235 7.0e-19 99.0 307 32.9
TAR624G0785 Trochodendron aralioides HOM05D000364 ORTHO05D000235 2.6e-18 97.1 324 31.2
Ca_01785_v3 Cicer arietinum L. HOM05D000364 ORTHO05D000235 5.9e-18 95.9 397 31.0
Oeu016921.2 Olea europaea HOM05D000364 ORTHO05D000235 7.7e-18 95.5 280 34.6
CDE05G0196 Ceratophyllum demersum HOM05D000364 ORTHO05D000235 1.3e-17 94.7 276 32.2
Gohir.D01G058400 Gossypium hirsutum HOM05D000364 ORTHO05D000235 1.3e-17 94.7 446 28.7
Manes.03G119700 Manihot esculenta HOM05D000364 ORTHO05D000235 1.7e-17 94.4 397 30.0
RhsimUnG0255400 Rhododendron simsii HOM05D000364 ORTHO05D000235 2.2e-17 94.0 283 34.3
Gorai.002G079200 Gossypium raimondii HOM05D000364 ORTHO05D000235 3.8e-17 93.2 447 28.4
COL.COLO4_09526 Corchorus olitorius HOM05D000364 ORTHO05D000235 6.5e-17 92.4 380 28.9
Lj3g0002883 Lotus japonicus HOM05D000364 ORTHO05D000235 6.5e-17 92.4 354 31.1
Gorai.009G429100 Gossypium raimondii HOM05D000364 ORTHO05D000235 1.1e-16 91.7 286 30.4
vmacro11790 Vaccinium macrocarpon HOM05D000364 ORTHO05D000235 1.1e-16 91.7 290 31.4
Psat5g248600 Pisum sativum HOM05D000364 ORTHO05D000235 1.5e-16 91.3 375 30.9
TWI38G2201 Tripterygium wilfordii HOM05D000364 ORTHO05D000235 1.5e-16 91.3 325 31.7
Gohir.A04G023900 Gossypium hirsutum HOM05D000364 ORTHO05D000235 1.9e-16 90.9 347 29.4
Gohir.D05G363600 Gossypium hirsutum HOM05D000364 ORTHO05D000235 4.2e-16 89.7 285 29.8
Phvul.011G153000 Phaseolus vulgaris HOM05D000364 ORTHO05D000235 5.5e-16 89.4 400 29.0
Rhsim06G0190900 Rhododendron simsii HOM05D000364 ORTHO05D000235 5.5e-16 89.4 299 32.8
Glyma.12G141700 Glycine max HOM05D000364 ORTHO05D000235 1.6e-15 87.8 408 28.9
Gohir.A01G071500 Gossypium hirsutum HOM05D000364 ORTHO05D000235 2.1e-15 87.4 447 28.6
Dinv22338 Davidia involucrata HOM05D000364 ORTHO05D000235 3.6e-15 86.7 175 40.0
Lalb_Chr03g0030281 Lupinus albus HOM05D000364 ORTHO05D000235 3.6e-15 86.7 405 30.6
Lalb_Chr19g0134611 Lupinus albus HOM05D000364 ORTHO05D000235 3.6e-15 86.7 306 32.4
Manes.17G031100 Manihot esculenta HOM05D000364 ORTHO05D000235 3.6e-15 86.7 357 29.4
VMungo1127G1491 Vigna mungo HOM05D000364 ORTHO05D000235 6.1e-15 85.9 399 29.3
Aqoxy1G03962 Aquilegia oxysepala HOM05D000364 ORTHO05D000235 8.0e-15 85.5 317 30.3
Glyma.06G260000 Glycine max HOM05D000364 ORTHO05D000235 2.3e-14 84.0 424 30.7
GSVIVG01005301001 Vitis vinifera HOM05D000364 ORTHO05D000235 5.2e-14 82.8 326 30.4
Lj3g0011529 Lotus japonicus HOM05D000364 ORTHO05D000235 1.2e-13 81.6 335 29.6
TAR078G0002 Trochodendron aralioides HOM05D001440 ORTHO05D000385 1.2e-13 81.6 123 46.3
Dinv22336 Davidia involucrata HOM05D000364 ORTHO05D029216 1.5e-13 81.3 123 41.5
HanXRQChr03g0076161 Helianthus annuus HOM05D000364 ORTHO05D000235 1.5e-13 81.3 354 29.9
Lsat_1_v5_gn_5_4821 Lactuca sativa HOM05D000364 ORTHO05D000235 3.3e-13 80.1 284 28.9
Sabra04G0016400 Salix brachista HOM05D000364 ORTHO05D000235 3.3e-13 80.1 323 26.6
QL05p077869 Quercus lobata HOM05D000364 ORTHO05D000235 4.4e-13 79.7 341 31.4
Thecc.06G205700 Theobroma cacao HOM05D000364 ORTHO05D000235 4.4e-13 79.7 335 27.8
Actinidia35292 Actinidia chinensis HOM05D000364 ORTHO05D000235 5.7e-13 79.3 370 27.0
DCAR_010002 Daucus carota HOM05D000364 ORTHO05D000235 5.7e-13 79.3 400 29.0
ECA240G0874 Erigeron canadensis HOM05D000364 ORTHO05D000235 9.7e-13 78.6 271 30.3
SGA_v2.0_scaffold9G04990 Striga asiatica HOM05D000364 ORTHO05D000235 9.7e-13 78.6 292 32.5
Hund23364 Selenicereus undatus HOM05D000364 ORTHO05D000235 1.7e-12 77.8 297 29.3
Dinv22337 Davidia involucrata HOM05D000364 ORTHO05D000235 2.2e-12 77.4 124 43.5
Phvul.002G219600 Phaseolus vulgaris HOM05D000364 ORTHO05D000235 2.8e-12 77.0 339 28.9
Phvul.006G195000 Phaseolus vulgaris HOM05D000364 ORTHO05D000235 2.8e-12 77.0 322 29.2
DCAR_022499 Daucus carota HOM05D000364 ORTHO05D000235 3.7e-12 76.6 356 31.5
Eucgr.F03384 Eucalyptus grandis HOM05D000364 ORTHO05D000235 6.3e-12 75.9 313 31.9
Potri.004G029100 Populus trichocarpa HOM05D000364 ORTHO05D000235 6.3e-12 75.9 317 26.5
Cfa000296 Carpinus fangiana HOM05D000364 ORTHO05D000235 1.1e-11 75.1 380 27.9
Aa31LG8G7440 Aethionema arabicum HOM05D000364 ORTHO05D000235 1.8e-11 74.3 330 31.2
Glyma.13G249800 Glycine max HOM05D000364 ORTHO05D000235 1.8e-11 74.3 399 25.6
Gohir.D06G126200 Gossypium hirsutum HOM05D000364 ORTHO05D000235 2.4e-11 73.9 320 29.7
Potri.011G033000 Populus trichocarpa HOM05D000364 ORTHO05D000235 3.1e-11 73.6 328 25.9
TPR.G19623 Trifolium pratense HOM05D000364 ORTHO05D000235 4.1e-11 73.2 300 28.0
Ciclev10008228m.g Citrus clementina HOM05D000364 ORTHO05D000235 5.3e-11 72.8 319 27.9
Duzib160G0707 Durio zibethinus HOM05D000364 ORTHO05D000235 5.3e-11 72.8 345 26.7
COL.COLO4_31665 Corchorus olitorius HOM05D000364 ORTHO05D000235 7.0e-11 72.4 333 28.5
Gorai.010G147100 Gossypium raimondii HOM05D000364 ORTHO05D000235 7.0e-11 72.4 320 29.4
Glyma.15G064500 Glycine max HOM05D000364 ORTHO05D000235 9.1e-11 72.0 322 30.1
Gohir.D05G170100 Gossypium hirsutum HOM05D000364 ORTHO05D000235 1.2e-10 71.6 321 25.5
Gohir.A06G122002 Gossypium hirsutum HOM05D000364 ORTHO05D000235 1.6e-10 71.2 320 30.3
CiPaw.09G154100 Carya illinoinensis HOM05D000364 ORTHO05D000235 2.7e-10 70.5 334 30.8
Gorai.009G175300 Gossypium raimondii HOM05D000364 ORTHO05D000235 2.7e-10 70.5 321 25.5
Sabra11G0026100 Salix brachista HOM05D000364 ORTHO05D000235 2.7e-10 70.5 321 26.2
Sabra11G0022500 Salix brachista HOM05D000364 ORTHO05D000235 3.5e-10 70.1 321 26.2
Duzib235G0893 Durio zibethinus HOM05D000364 ORTHO05D000235 7.7e-10 68.9 349 27.8
Medtr8g466800 Medicago truncatula HOM05D000364 ORTHO05D000235 1.0e-09 68.6 246 28.9
Lsat_1_v5_gn_9_95320 Lactuca sativa HOM05D000364 ORTHO05D000235 1.7e-09 67.8 251 30.3
A05p28170 Brassica napus HOM05D000364 ORTHO05D000235 2.2e-09 67.4 262 30.2
Gohir.A05G167100 Gossypium hirsutum HOM05D000364 ORTHO05D000235 2.2e-09 67.4 321 25.5
Sp3g18680 Schrenkiella parvula HOM05D000364 ORTHO05D000235 2.2e-09 67.4 267 29.6
VMungo0540G1365 Vigna mungo HOM05D000364 ORTHO05D000235 3.8e-09 66.6 318 28.3
BcaB06g26131 Brassica carinata HOM05D000364 ORTHO05D000235 5.0e-09 66.2 266 29.7
BcaC01g03543 Brassica carinata HOM05D000364 ORTHO05D000235 5.0e-09 66.2 232 30.2
C03p51250 Brassica napus HOM05D000364 ORTHO05D000235 5.0e-09 66.2 232 30.2
BolC3t17414H Brassica oleracea HOM05D000364 ORTHO05D000235 5.0e-09 66.2 232 30.2
Glyma.07G188100 Glycine max HOM05D000364 ORTHO05D000235 5.0e-09 66.2 350 26.9
CSS0047155 Camellia sinensis var. sinensis HOM05D000364 ORTHO05D000235 6.5e-09 65.9 324 25.3
BraA05t21699Z Brassica rapa HOM05D000364 ORTHO05D000235 8.5e-09 65.5 262 30.5
HanXRQChr08g0234131 Helianthus annuus HOM05D000364 ORTHO05D000235 8.5e-09 65.5 309 26.9
TPR.G10026 Trifolium pratense HOM05D000364 ORTHO05D000235 8.5e-09 65.5 243 27.6
CDE02G1300 Ceratophyllum demersum HOM05D000364 ORTHO05D000235 1.1e-08 65.1 281 28.5
Lalb_Chr18g0060081 Lupinus albus HOM05D000364 ORTHO05D000235 1.1e-08 65.1 333 26.1
Psat4g134880 Pisum sativum HOM05D000364 ORTHO05D000235 1.1e-08 65.1 288 28.1
A03p41880 Brassica napus HOM05D000364 ORTHO05D000235 1.9e-08 64.3 232 29.3
Dinv17862 Davidia involucrata HOM05D000364 ORTHO05D000235 1.9e-08 64.3 356 28.1
BcaC05g28301 Brassica carinata HOM05D000364 ORTHO05D000235 3.2e-08 63.5 264 29.5
C05p43610 Brassica napus HOM05D000364 ORTHO05D000235 3.2e-08 63.5 264 29.5
Ca_22930_v3 Cicer arietinum L. HOM05D000364 ORTHO05D000235 4.2e-08 63.2 311 27.7
SHI31887 Sapria himalayana HOM05D000364 ORTHO05D000235 5.5e-08 62.8 294 25.9
Sc03g0009480 Simmondsia chinensis HOM05D000364 ORTHO05D000235 5.5e-08 62.8 342 30.4
TAR626G1768 Trochodendron aralioides HOM05D000364 ORTHO05D000235 7.2e-08 62.4 319 28.8
A01p34170 Brassica napus HOM05D000364 ORTHO05D000235 1.2e-07 61.6 244 30.7
BraA01t03519Z Brassica rapa HOM05D000364 ORTHO05D000235 1.2e-07 61.6 244 30.7
ECA246G3237 Erigeron canadensis HOM05D000364 ORTHO05D000235 1.6e-07 61.2 310 28.7
Lalb_Chr14g0365981 Lupinus albus HOM05D000364 ORTHO05D000235 1.6e-07 61.2 364 28.0
BolC5t33081H Brassica oleracea HOM05D000364 ORTHO05D000235 2.1e-07 60.8 264 29.2
ClCG10G005940 Citrullus lanatus HOM05D000364 ORTHO05D000235 2.1e-07 60.8 414 26.1
THA.LOC104817888 Tarenaya hassleriana HOM05D000364 ORTHO05D000235 2.1e-07 60.8 333 27.9
VMungo0251G1957 Vigna mungo HOM05D000364 ORTHO05D000235 2.1e-07 60.8 352 25.9
EL10Ac4g08030 Beta vulgaris HOM05D000364 ORTHO05D000235 2.7e-07 60.5 108 39.8
Lalb_Chr20g0122561 Lupinus albus HOM05D000364 ORTHO05D000235 2.7e-07 60.5 301 29.9
PSO210G5974 Papaver somniferum HOM05D000364 ORTHO05D000235 4.7e-07 59.7 330 27.3
CANSAT11G0195 Cannabis sativa HOM05D000364 ORTHO05D000235 8.0e-07 58.9 386 26.7
MSTRG.14655 Avicennia marina HOM05D000364 ORTHO05D000235 1.0e-06 58.5 310 28.7
Psat1g210600 Pisum sativum HOM05D000364 ORTHO05D000235 1.8e-06 57.8 259 28.2
THA.LOC104816918 Tarenaya hassleriana HOM05D000364 ORTHO05D000235 1.8e-06 57.8 294 30.6
Ah.04g165240 Amaranthus hybridus HOM05D000364 ORTHO05D000235 2.3e-06 57.4 108 38.9
arahy.Tifrunner.gnm1.ann1.HD7TF9 Arachis hypogaea HOM05D000364 ORTHO05D000235 2.3e-06 57.4 350 26.9
THA.LOC104804528 Tarenaya hassleriana HOM05D000364 ORTHO05D000235 2.3e-06 57.4 293 30.7
BcaC09g49004 Brassica carinata HOM05D000364 ORTHO05D000235 3.0e-06 57.0 282 27.7
Lj6g0016286 Lotus japonicus HOM05D000364 ORTHO05D000235 3.0e-06 57.0 309 27.5
BcaB04g19120 Brassica carinata HOM05D000364 ORTHO05D000235 5.2e-06 56.2 353 27.8
Lalb_Chr01g0006311 Lupinus albus HOM05D000364 ORTHO05D000235 5.2e-06 56.2 156 34.0
arahy.Tifrunner.gnm1.ann1.DH6SQG Arachis hypogaea HOM05D000364 ORTHO05D000235 8.8e-06 55.5 403 28.0
BraA03t13341Z Brassica rapa HOM05D000364 ORTHO05D000235 8.8e-06 55.5 244 27.9


User provided reference genes

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