Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000206g0080 Nicotiana tabacum HOM05D008845 ORTHO05D011644 9.3e-78 293.5 152 100.0
Nitab4.5_0003135g0050 Nicotiana tabacum HOM05D027864 ORTHO05D011674 2.8e-34 149.1 78 94.9
Nitab4.5_0010333g0070 Nicotiana tabacum HOM05D008845 ORTHO05D011644 1.7e-31 139.8 77 93.5
Nitab4.5_0007251g0010 Nicotiana tabacum HOM05D008845 ORTHO05D011644 2.2e-31 139.4 75 96.0
Nitab4.5_0016007g0010 Nicotiana tabacum HOM05D008845 ORTHO05D011644 2.2e-31 139.4 75 96.0
Sopen00g001080 Solanum pennellii HOM05D008845 ORTHO05D011644 2.2e-31 139.4 75 96.0
Nitab4.5_0003481g0020 Nicotiana tabacum HOM05D009456 ORTHO05D011674 6.5e-31 137.9 78 89.7
Nitab4.5_0001761g0050 Nicotiana tabacum HOM05D008845 ORTHO05D011644 8.5e-31 137.5 74 95.9
Nitab4.5_0012599g0010 Nicotiana tabacum HOM05D008845 ORTHO05D011644 3.2e-30 135.6 75 93.3
Peaxi162Scf00348g00051 Petunia axillaris HOM05D008845 ORTHO05D011644 3.2e-30 135.6 75 94.7
Peaxi162Scf00566g00061 Petunia axillaris HOM05D008845 ORTHO05D011644 3.2e-30 135.6 75 94.7
Nitab4.5_0000031g0120 Nicotiana tabacum HOM05D009456 ORTHO05D011674 5.5e-30 134.8 78 85.9
Nn1g10161 Nelumbo nucifera HOM05D009456 ORTHO05D011674 1.2e-29 133.7 75 89.3
Nitab4.5_0004300g0050 Nicotiana tabacum HOM05D008845 ORTHO05D011644 1.0e-28 130.6 75 89.3
Dinv06664 Davidia involucrata HOM05D008845 ORTHO05D011644 1.8e-28 129.8 115 65.2
Nitab4.5_0010586g0010 Nicotiana tabacum HOM05D008845 ORTHO05D011644 1.8e-28 129.8 116 66.4
CAN.G1.1 Capsicum annuum HOM05D008845 ORTHO05D011644 5.2e-28 128.3 75 88.0
Nitab4.5_0000866g0180 Nicotiana tabacum HOM05D008845 ORTHO05D011644 1.2e-27 127.1 75 88.0
Nitab4.5_0013560g0020 Nicotiana tabacum HOM05D008845 ORTHO05D011644 2.6e-27 125.9 75 86.7
Nitab4.5_0000172g1500 Nicotiana tabacum HOM05D008845 ORTHO05D011644 5.7e-27 124.8 75 88.0
Nitab4.5_0000172g1230 Nicotiana tabacum HOM05D009456 ORTHO05D011674 2.8e-26 122.5 74 85.1
CAN.G1594.3 Capsicum annuum HOM05D002660 ORTHO05D011674 7.0e-25 117.9 80 75.0
Nitab4.5_0010305g0020 Nicotiana tabacum HOM05D009456 ORTHO05D011674 2.7e-24 115.9 78 78.2
Nitab4.5_0003490g0030 Nicotiana tabacum HOM05D008845 ORTHO05D011644 4.5e-24 115.2 77 76.6
Nitab4.5_0001023g0100 Nicotiana tabacum HOM05D009456 ORTHO05D011674 1.3e-23 113.6 67 83.6
Nitab4.5_0002718g0090 Nicotiana tabacum HOM05D008845 ORTHO05D011644 5.5e-22 108.2 60 91.7
Dinv06680 Davidia involucrata HOM05D002660 ORTHO05D011644 4.7e-21 105.1 65 84.6
Nitab4.5_0008535g0040 Nicotiana tabacum HOM05D008845 ORTHO05D011644 6.1e-21 104.8 58 93.1
Nitab4.5_0000172g1210 Nicotiana tabacum HOM05D009456 ORTHO05D011674 1.4e-20 103.6 82 68.3
Nitab4.5_0020764g0010 Nicotiana tabacum HOM05D008845 ORTHO05D011644 8.8e-20 100.9 56 91.1
Nitab4.5_0000172g0660 Nicotiana tabacum HOM05D009456 ORTHO05D011674 7.5e-19 97.8 89 61.8
Lj2A1234G110 Lonicera japonica HOM05D002578 ORTHO05D005154 3.5e-16 89.0 64 76.6
CAN.G628.86 Capsicum annuum HOM05D007877 ORTHO05D009957 7.8e-16 87.8 50 90.0
Medtr7g068760 Medicago truncatula HOM05D009456 ORTHO05D011674 1.5e-14 83.6 73 64.4
Nitab4.5_0001788g0110 Nicotiana tabacum HOM05D009456 ORTHO05D011674 1.5e-14 83.6 74 60.8
Nitab4.5_0000351g0270 Nicotiana tabacum HOM05D008845 ORTHO05D011644 1.9e-14 83.2 47 93.6
Nitab4.5_0000172g1930 Nicotiana tabacum HOM05D008845 ORTHO05D011644 1.6e-13 80.1 47 87.2
Nitab4.5_0000905g0040 Nicotiana tabacum HOM05D008845 ORTHO05D011644 2.1e-13 79.7 48 85.4
Cpa.g.sc155.2 Carica papaya HOM05D009456 ORTHO05D011674 1.4e-12 77.0 77 58.4
DCAR_031658 Daucus carota HOM05D006604 ORTHO05D007974 6.8e-12 74.7 66 62.1
Sopen11g020270 Solanum pennellii HOM05D008845 ORTHO05D011644 9.8e-11 70.9 47 83.0
CDE02G1276 Ceratophyllum demersum HOM05D009456 ORTHO05D011674 1.3e-10 70.5 67 58.2
Nitab4.5_0000592g0120 Nicotiana tabacum HOM05D016373 ORTHO05D015637 2.2e-10 69.7 48 77.1
Nitab4.5_0000117g0120 Nicotiana tabacum HOM05D008845 ORTHO05D011644 1.8e-09 66.6 40 87.5
Nitab4.5_0010333g0050 Nicotiana tabacum HOM05D008845 ORTHO05D011644 2.0e-08 63.2 34 91.2
Nitab4.5_0001034g0050 Nicotiana tabacum HOM05D008845 ORTHO05D016275 1.3e-07 60.5 34 88.2
arahy.Tifrunner.gnm1.ann1.R6W62K Arachis hypogaea HOM05D019150 ORTHO05D011674 3.9e-07 58.9 44 77.3
arahy.Tifrunner.gnm1.ann1.ZSUH31 Arachis hypogaea HOM05D019150 ORTHO05D011674 3.9e-07 58.9 44 77.3
Dinv06686 Davidia involucrata HOM05D020557 ORTHO05D011674 3.9e-07 58.9 45 75.6
arahy.Tifrunner.gnm1.ann1.1EQ82B Arachis hypogaea HOM05D019150 ORTHO05D011674 2.5e-06 56.2 44 70.5


User provided reference genes

Program Settings