Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.4e-89 332.8 155 100.0
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 5.6e-38 161.4 78 96.2
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 7.9e-32 141.0 67 97.0
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 2.3e-31 139.4 67 94.0
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 3.0e-31 139.0 67 95.5
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 3.3e-30 135.6 70 88.6
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.3e-29 133.7 67 91.0
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.3e-29 133.7 67 91.0
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 1.6e-29 133.3 67 89.6
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 2.8e-29 132.5 69 87.0
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 6.2e-29 131.3 67 88.1
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 6.2e-29 131.3 66 90.9
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 6.2e-29 131.3 87 72.4
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 8.1e-29 131.0 67 88.1
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 8.1e-29 131.0 69 87.0
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 1.1e-28 130.6 69 85.5
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 1.1e-28 130.6 69 85.5
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 1.1e-28 130.6 67 86.6
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 1.4e-28 130.2 67 85.1
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 1.4e-28 130.2 74 79.7
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 3.1e-28 129.0 66 87.9
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 3.1e-28 129.0 67 88.1
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 3.1e-28 129.0 67 86.6
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 5.3e-28 128.3 67 86.6
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 6.9e-28 127.9 67 86.6
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 9.0e-28 127.5 67 86.6
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 9.0e-28 127.5 66 84.8
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 9.0e-28 127.5 67 85.1
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 9.0e-28 127.5 66 87.9
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 1.2e-27 127.1 67 83.6
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 1.2e-27 127.1 69 82.6
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 1.2e-27 127.1 67 86.6
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 1.5e-27 126.7 66 83.3
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 1.5e-27 126.7 67 83.6
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.5e-27 126.7 67 86.6
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.5e-27 126.7 67 86.6
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 2.0e-27 126.3 67 86.6
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 2.0e-27 126.3 67 85.1
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 2.0e-27 126.3 67 83.6
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 2.6e-27 125.9 67 83.6
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 2.6e-27 125.9 67 85.1
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 3.4e-27 125.6 67 82.1
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 3.4e-27 125.6 67 85.1
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 4.5e-27 125.2 67 85.1
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 4.5e-27 125.2 67 85.1
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 5.8e-27 124.8 67 82.1
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 7.6e-27 124.4 67 82.1
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 7.6e-27 124.4 76 76.3
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 1.0e-26 124.0 66 80.3
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 1.0e-26 124.0 66 80.3
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 1.0e-26 124.0 66 80.3
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 1.0e-26 124.0 66 80.3
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 1.0e-26 124.0 66 80.3
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 1.0e-26 124.0 66 80.3
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 1.3e-26 123.6 69 78.3
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 1.3e-26 123.6 71 77.5
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 1.3e-26 123.6 67 82.1
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 1.7e-26 123.2 69 81.2
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.7e-26 123.2 67 83.6
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 1.7e-26 123.2 67 85.1
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 1.7e-26 123.2 67 82.1
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 1.7e-26 123.2 67 79.1
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 2.2e-26 122.9 67 80.6
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 2.2e-26 122.9 72 75.0
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 2.9e-26 122.5 67 79.1
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 3.8e-26 122.1 66 80.3
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 3.8e-26 122.1 66 80.3
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 3.8e-26 122.1 66 80.3
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 6.5e-26 121.3 66 78.8
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 6.5e-26 121.3 67 80.6
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 8.4e-26 120.9 67 80.6
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 8.4e-26 120.9 72 73.6
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 1.4e-25 120.2 65 81.5
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 1.9e-25 119.8 66 77.3
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 2.5e-25 119.4 71 80.3
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 3.2e-25 119.0 70 78.6
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 3.2e-25 119.0 67 80.6
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 9.3e-25 117.5 67 82.1
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 1.2e-24 117.1 66 72.7
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 1.2e-24 117.1 67 79.1
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 1.6e-24 116.7 53 98.1
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 1.8e-23 113.2 71 71.8
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 2.3e-23 112.8 60 81.7
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 2.3e-23 112.8 66 72.7
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 6.7e-23 111.3 53 90.6
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 1.9e-22 109.8 106 56.6
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 5.7e-22 108.2 53 86.8
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 7.4e-22 107.8 73 64.4
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 9.6e-22 107.5 67 68.7
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 2.8e-21 105.9 70 65.7
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 2.0e-19 99.8 65 69.2
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 5.0e-18 95.1 61 63.9
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 6.5e-18 94.7 46 89.1
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 8.4e-18 94.4 46 87.0
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 1.4e-17 93.6 46 87.0
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 4.2e-17 92.0 41 97.6
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 2.3e-15 86.3 48 81.2
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 3.7e-13 79.0 57 61.4
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 3.7e-13 79.0 52 69.2
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 1.8e-12 76.6 55 52.7
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 7.9e-08 61.2 37 67.6
Sc20g0003470 Simmondsia chinensis HOM05D007483 ORTHO05D009133 9.7e-06 54.3 33 72.7


User provided reference genes

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