Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000201g0240 Nicotiana tabacum HOM05D006243 ORTHO05D007688 4.3e-207 724.5 399 100.0
Nitab4.5_0009518g0020 Nicotiana tabacum HOM05D006243 ORTHO05D007688 6.4e-187 657.5 399 92.5
Peaxi162Scf00305g00613 Petunia axillaris HOM05D006243 ORTHO05D007688 6.9e-181 637.5 421 85.5
PGSC0003DMG402015686 Solanum tuberosum HOM05D006243 ORTHO05D007688 4.9e-179 631.3 421 85.5
CAN.G222.23 Capsicum annuum HOM05D006243 ORTHO05D007688 6.5e-179 630.9 421 85.3
Solyc11g011170.2 Solanum lycopersicum HOM05D006243 ORTHO05D007688 6.5e-179 630.9 421 85.7
Sopen11g005930 Solanum pennellii HOM05D006243 ORTHO05D007688 4.2e-178 628.2 421 85.3
GSVIVG01030779001 Vitis vinifera HOM05D006243 ORTHO05D007688 3.1e-125 452.6 428 64.7
Oeu012257.1 Olea europaea HOM05D006243 ORTHO05D007688 1.2e-124 450.7 425 66.4
Cc07_g13520 Coffea canephora HOM05D006243 ORTHO05D007688 5.9e-124 448.4 416 65.6
SalBow3G2874 Salvia bowleyana HOM05D006243 ORTHO05D007688 2.9e-123 446.0 420 65.5
CSS0038083 Camellia sinensis var. sinensis HOM05D006243 ORTHO05D007688 3.8e-123 445.7 418 64.8
Oeu032326.2 Olea europaea HOM05D006243 ORTHO05D007688 5.6e-122 441.8 415 65.3
Rhsim10G0177000 Rhododendron simsii HOM05D006243 ORTHO05D007688 5.2e-120 435.3 427 62.1
DCAR_014173 Daucus carota HOM05D006243 ORTHO05D007688 8.9e-120 434.5 426 63.6
MSTRG.23392 Avicennia marina HOM05D006243 ORTHO05D007688 2.2e-118 429.9 422 63.3
Ciclev10011587m.g Citrus clementina HOM05D006243 ORTHO05D007688 2.0e-116 423.3 434 62.7
Haze_14258 Corylus avellana HOM05D006243 ORTHO05D007688 5.9e-116 421.8 412 65.0
Cfa007817 Carpinus fangiana HOM05D006243 ORTHO05D007688 2.3e-115 419.9 416 64.4
Potri.017G129100 Populus trichocarpa HOM05D006243 ORTHO05D007688 1.5e-114 417.2 430 60.5
Migut.H02264 Erythranthe guttata HOM05D006243 ORTHO05D007688 3.6e-113 412.5 416 63.0
Atru.chr1.1900 Acer truncatum HOM05D006243 ORTHO05D007688 1.4e-112 410.6 423 61.7
Manes.01G117900 Manihot esculenta HOM05D006243 ORTHO05D007688 1.5e-111 407.1 416 61.5
CiPaw.03G071500 Carya illinoinensis HOM05D006243 ORTHO05D007688 3.4e-111 406.0 423 59.8
Sabra17G0107600 Salix brachista HOM05D006243 ORTHO05D007688 1.7e-110 403.7 439 59.9
ECA246G3278 Erigeron canadensis HOM05D006243 ORTHO05D007688 2.2e-110 403.3 423 60.3
TAR629G1693 Trochodendron aralioides HOM05D006243 ORTHO05D007688 4.9e-110 402.1 438 58.2
Cpa.g.sc67.47 Carica papaya HOM05D006243 ORTHO05D007688 1.9e-109 400.2 428 59.6
vmacro07692 Vaccinium macrocarpon HOM05D006243 ORTHO05D007688 9.2e-109 397.9 466 53.4
Sc10g0004760 Simmondsia chinensis HOM05D006243 ORTHO05D007688 2.0e-108 396.7 403 62.3
Actinidia06497 Actinidia chinensis HOM05D006243 ORTHO05D007688 1.3e-107 394.0 367 66.2
Lsat_1_v5_gn_3_64500 Lactuca sativa HOM05D006243 ORTHO05D007688 2.3e-107 393.3 439 54.9
HanXRQChr13g0418351 Helianthus annuus HOM05D006243 ORTHO05D007688 3.0e-107 392.9 417 60.2
Thecc.04G115200 Theobroma cacao HOM05D006243 ORTHO05D007688 6.6e-107 391.7 399 61.7
Prupe.3G161300 Prunus persica HOM05D006243 ORTHO05D007688 8.6e-107 391.3 416 61.5
TWI53G0799 Tripterygium wilfordii HOM05D006243 ORTHO05D007688 1.9e-106 390.2 426 58.9
Nn4g24254 Nelumbo nucifera HOM05D006243 ORTHO05D007688 3.3e-106 389.4 424 60.1
MD09G1263800 Malus domestica HOM05D006243 ORTHO05D007688 2.1e-105 386.7 416 60.3
Duzib133G1335 Durio zibethinus HOM05D006243 ORTHO05D007688 4.7e-105 385.6 399 60.7
Gohir.A07G078300 Gossypium hirsutum HOM05D006243 ORTHO05D007688 1.1e-104 384.4 385 64.2
Gorai.001G088700 Gossypium raimondii HOM05D006243 ORTHO05D007688 1.4e-104 384.0 385 64.4
CANSAT64G2718 Cannabis sativa HOM05D006243 ORTHO05D007688 1.8e-104 383.6 421 59.4
FAN28G0309 Fragaria x ananassa HOM05D006243 ORTHO05D007688 1.5e-103 380.6 426 58.2
Eucgr.J01597 Eucalyptus grandis HOM05D006243 ORTHO05D007688 3.4e-103 379.4 422 60.7
Gohir.D07G083100 Gossypium hirsutum HOM05D006243 ORTHO05D007688 4.4e-103 379.0 385 63.6
FAN26G0580 Fragaria x ananassa HOM05D006243 ORTHO05D007688 7.5e-103 378.3 426 57.7
MD17G1259100 Malus domestica HOM05D006243 ORTHO05D007688 1.3e-102 377.5 423 58.9
FvH4_1g28740 Fragaria vesca HOM05D006243 ORTHO05D007688 1.7e-102 377.1 426 57.7
FAN19G0552 Fragaria x ananassa HOM05D006243 ORTHO05D007688 2.9e-102 376.3 426 57.7
Lj4A263G87 Lonicera japonica HOM05D006243 ORTHO05D007688 4.1e-101 372.5 337 68.5
RcHm_v2.0_Chr3g0493131 Rosa chinensis HOM05D006243 ORTHO05D007688 1.0e-99 367.9 425 57.2
ClCG05G011500 Citrullus lanatus HOM05D006243 ORTHO05D007688 1.5e-98 364.0 417 57.1
CARHR058210 Cardamine hirsuta HOM05D006243 ORTHO05D007688 7.3e-98 361.7 367 63.5
Aqoxy3G00051 Aquilegia oxysepala HOM05D006243 ORTHO05D007688 3.1e-96 356.3 410 57.3
EL10Ac2g03168 Beta vulgaris HOM05D006243 ORTHO05D007688 4.0e-96 355.9 426 55.6
Carub.0002s1234 Capsella rubella HOM05D006243 ORTHO05D007688 6.8e-96 355.1 367 61.9
AUR62038703 Chenopodium quinoa HOM05D006243 ORTHO05D007688 8.9e-96 354.8 393 57.3
Aa31LG2G3000 Aethionema arabicum HOM05D006243 ORTHO05D007688 1.2e-95 354.4 391 60.9
Sp5g21350 Schrenkiella parvula HOM05D006243 ORTHO05D007688 2.0e-95 353.6 367 63.5
AUR62018213 Chenopodium quinoa HOM05D006243 ORTHO05D007688 4.4e-95 352.4 411 54.7
CsaV3_3G020810 Cucumis sativus L. HOM05D006243 ORTHO05D007688 9.9e-95 351.3 385 60.0
MELO3C020192.2 Cucumis melo HOM05D006243 ORTHO05D007688 1.3e-94 350.9 417 55.6
Lalb_Chr10g0104381 Lupinus albus HOM05D006243 ORTHO05D007688 1.9e-93 347.1 369 60.7
BraA07t30960Z Brassica rapa HOM05D006243 ORTHO05D007688 4.1e-93 345.9 363 63.4
THA.LOC104805617 Tarenaya hassleriana HOM05D006243 ORTHO05D007688 5.4e-93 345.5 365 62.5
BcaC08g46068 Brassica carinata HOM05D006243 ORTHO05D007688 9.2e-93 344.7 359 63.8
AT1G66330 Arabidopsis thaliana HOM05D006243 ORTHO05D007688 1.6e-92 344.0 367 62.1
arahy.Tifrunner.gnm1.ann1.Y3W4B5 Arachis hypogaea HOM05D006243 ORTHO05D007688 2.1e-92 343.6 312 68.6
BcaB05g24167 Brassica carinata HOM05D006243 ORTHO05D007688 3.5e-92 342.8 357 62.2
AL2G24050 Arabidopsis lyrata HOM05D006243 ORTHO05D007688 4.6e-92 342.4 368 62.5
A07p33290 Brassica napus HOM05D006243 ORTHO05D007688 1.0e-91 341.3 364 63.2
BcaB03g15275 Brassica carinata HOM05D006243 ORTHO05D007688 1.7e-91 340.5 355 63.9
C06p39620 Brassica napus HOM05D006243 ORTHO05D007688 2.3e-91 340.1 360 63.6
BolC6t39055H Brassica oleracea HOM05D006243 ORTHO05D007688 2.3e-91 340.1 360 63.6
PSO017G3733 Papaver somniferum HOM05D006243 ORTHO05D007688 3.0e-91 339.7 414 55.1
ATR0317G069 Amborella trichopoda HOM05D006243 ORTHO05D007688 1.5e-90 337.4 429 52.2
BcaC03g14742 Brassica carinata HOM05D006243 ORTHO05D007688 3.3e-90 336.3 346 64.5
BolC2t08324H Brassica oleracea HOM05D006243 ORTHO05D007688 3.3e-90 336.3 346 64.5
BraA02t06418Z Brassica rapa HOM05D006243 ORTHO05D007688 3.3e-90 336.3 357 62.7
Glyma.02G245300 Glycine max HOM05D006243 ORTHO05D007688 3.3e-90 336.3 417 53.2
SGA_v2.0_scaffold108G30955 Striga asiatica HOM05D006243 ORTHO05D007688 5.6e-90 335.5 416 56.0
PSO478G0940 Papaver somniferum HOM05D006243 ORTHO05D007688 9.6e-90 334.7 414 54.8
COL.COLO4_10159 Corchorus olitorius HOM05D006243 ORTHO05D007688 1.2e-89 334.3 424 52.6
Os05g0148700 Oryza sativa ssp. japonica HOM05D006243 ORTHO05D007688 4.0e-88 329.3 386 57.3
C02p21930 Brassica napus HOM05D006243 ORTHO05D007688 8.9e-88 328.2 340 64.1
A02p13590 Brassica napus HOM05D006243 ORTHO05D007688 2.0e-87 327.0 340 64.4
Phvul.008G235800 Phaseolus vulgaris HOM05D006243 ORTHO05D007688 4.4e-87 325.9 386 54.9
Zm00001eb165460 Zea mays HOM05D006243 ORTHO05D007688 1.3e-86 324.3 401 55.1
Lalb_Chr17g0346141 Lupinus albus HOM05D006243 ORTHO05D007688 9.3e-85 318.2 358 58.4
CDE04G1800 Ceratophyllum demersum HOM05D006243 ORTHO05D007688 6.0e-84 315.5 408 53.4
LjContig00141g0011202 Lotus japonicus HOM05D006243 ORTHO05D007688 7.8e-84 315.1 384 52.6
PGR004G2672 Punica granatum HOM05D006243 ORTHO05D007688 2.3e-83 313.5 377 58.6
Medtr5g078290 Medicago truncatula HOM05D006243 ORTHO05D007688 1.1e-82 311.2 415 52.3
arahy.Tifrunner.gnm1.ann1.SFD8TD Arachis hypogaea HOM05D006243 ORTHO05D007688 2.4e-80 303.5 284 68.7
unitig_736.g22596 Utricularia gibba HOM05D006243 ORTHO05D007688 1.2e-79 301.2 242 66.9
HPP92_027416 Vanilla planifolia HOM05D006243 ORTHO05D007688 2.6e-79 300.1 383 53.5
Hund13108 Selenicereus undatus HOM05D006243 ORTHO05D007688 7.6e-79 298.5 243 66.3
TPR.G8275 Trifolium pratense HOM05D006243 ORTHO05D007688 2.7e-76 290.0 297 55.6
SEGI_26344 Sequoiadendron giganteum HOM05D006243 ORTHO05D007688 1.9e-74 283.9 308 60.1
Ca_05826_v3 Cicer arietinum L. HOM05D006243 ORTHO05D007688 3.8e-70 269.6 356 53.7
Glyma.14G215400 Glycine max HOM05D006243 ORTHO05D007688 7.9e-68 261.9 366 51.6
Sed0013436 Sechium edule HOM05D006243 ORTHO05D007688 9.6e-66 255.0 323 56.0
Thhalv10018612m.g Eutrema salsugineum HOM05D006243 ORTHO05D007688 1.3e-65 254.6 301 61.5
Dinv28209 Davidia involucrata HOM05D006243 ORTHO05D007688 2.4e-64 250.4 257 61.9
Actinidia17213 Actinidia chinensis HOM05D006243 ORTHO05D007688 5.9e-55 219.2 188 66.0
Ah.10g032360 Amaranthus hybridus HOM05D006243 ORTHO05D007688 2.7e-52 210.3 410 38.0
MD17G1258600 Malus domestica HOM05D006243 ORTHO05D007688 2.5e-50 203.8 210 58.1
QL02p058075 Quercus lobata HOM05D006243 ORTHO05D007688 3.7e-41 173.3 211 59.7
VMungo0647G1427 Vigna mungo HOM05D006243 ORTHO05D007688 6.3e-41 172.6 294 44.6
Mapoly0055s0114 Marchantia polymorpha HOM05D006243 ORTHO05D007688 1.2e-39 168.3 319 42.3
AagrBONN_evm.TU.Sc2ySwM_117.2468 Anthoceros agrestis HOM05D006243 ORTHO05D007688 2.6e-39 167.2 306 42.8
Pp3c5_8230 Physcomitrium patens HOM05D006243 ORTHO05D007688 4.5e-39 166.4 308 45.1
VMungo0647G1521 Vigna mungo HOM05D006243 ORTHO05D007688 1.7e-38 164.5 102 81.4
Pp3c16_1710 Physcomitrium patens HOM05D006243 ORTHO05D007688 1.1e-37 161.8 233 44.2
Psat2g047960 Pisum sativum HOM05D006243 ORTHO05D007688 3.6e-36 156.8 269 49.8
Pp3c25_7980 Physcomitrium patens HOM05D006243 ORTHO05D007688 8.8e-35 152.1 221 44.3
SMO238G0021 Selaginella moellendorffii HOM05D006243 ORTHO05D007688 2.1e-28 131.0 238 37.4
CBR_g27960 Chara braunii HOM05D006243 ORTHO05D007688 2.6e-26 124.0 186 41.9
Lsat_1_v5_gn_2_20381 Lactuca sativa HOM05D006243 ORTHO05D007688 3.5e-23 113.6 109 61.5
RcHm_v2.0_Chr7g0216651 Rosa chinensis HOM05D006243 ORTHO05D007688 1.2e-20 105.1 60 90.0
Actinidia17214 Actinidia chinensis HOM05D006243 ORTHO05D007688 4.0e-19 100.1 159 47.2
unitig_736.g22595 Utricularia gibba HOM05D006243 ORTHO05D007688 1.9e-13 81.3 138 37.0
Lsat_1_v5_gn_9_64341 Lactuca sativa HOM05D000326 ORTHO05D000312 6.8e-11 72.8 97 51.5
Hund13037 Selenicereus undatus HOM05D006243 ORTHO05D007688 4.4e-10 70.1 98 37.8
Lsat_1_v5_gn_9_50281 Lactuca sativa HOM05D006243 ORTHO05D007688 3.5e-07 60.5 36 83.3


User provided reference genes

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