Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 0.0e+00 1286.2 660 100.0
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 0.0e+00 1080.9 675 84.7
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 2.1e-166 590.1 701 51.1
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 1.6e-158 563.9 441 66.0
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 1.8e-157 560.5 441 65.8
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 2.3e-157 560.1 489 62.2
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 1.5e-151 540.8 737 45.9
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 2.9e-144 516.5 668 47.8
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 1.0e-141 508.1 700 45.0
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 5.4e-138 495.7 679 46.1
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 1.6e-137 494.2 690 46.4
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 1.6e-134 484.2 530 51.7
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 4.7e-134 482.6 706 44.2
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 1.4e-130 471.1 728 42.3
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 4.1e-130 469.5 666 47.4
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 5.4e-130 469.2 528 51.7
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 5.4e-130 469.2 682 44.0
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 9.2e-130 468.4 570 49.3
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 9.2e-130 468.4 600 47.5
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 3.5e-129 466.5 571 48.5
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 2.3e-128 463.8 504 52.4
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 2.5e-127 460.3 441 56.0
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 4.3e-127 459.5 325 69.5
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 5.6e-127 459.1 587 47.4
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 2.1e-126 457.2 660 44.8
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 3.6e-126 456.4 399 58.1
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 1.0e-125 454.9 694 42.1
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 1.8e-125 454.1 694 42.8
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 1.8e-125 454.1 432 54.9
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 3.0e-125 453.4 601 48.1
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 1.2e-124 451.4 681 42.9
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 2.0e-124 450.7 593 46.7
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 1.3e-123 448.0 680 43.2
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 1.3e-123 448.0 439 55.1
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 2.2e-123 447.2 677 43.4
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 4.9e-123 446.0 704 41.3
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 1.1e-122 444.9 439 54.9
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 1.4e-122 444.5 416 55.8
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 7.8e-121 438.7 618 42.7
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 1.0e-120 438.3 674 43.9
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 3.9e-120 436.4 485 50.1
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 2.5e-119 433.7 576 46.2
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 4.3e-119 433.0 536 48.1
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 7.3e-119 432.2 614 43.0
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 2.1e-118 430.6 614 42.8
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 8.0e-118 428.7 656 42.8
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 1.8e-117 427.6 666 42.3
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 4.0e-117 426.4 435 53.8
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 7.5e-116 422.2 654 42.0
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 8.3e-115 418.7 656 42.8
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 5.0e-112 409.5 633 42.3
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 6.6e-112 409.1 431 52.7
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 3.3e-111 406.8 526 47.5
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 4.3e-111 406.4 683 41.1
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 1.2e-110 404.8 357 58.0
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 1.6e-110 404.4 551 45.2
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 1.8e-109 401.0 662 42.0
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 2.3e-109 400.6 361 59.0
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 3.1e-109 400.2 580 44.7
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 2.0e-108 397.5 582 43.5
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 7.5e-108 395.6 468 49.8
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 9.9e-108 395.2 345 59.4
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 9.9e-108 395.2 340 59.7
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 1.4e-106 391.3 508 45.9
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 3.2e-106 390.2 327 60.9
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 1.6e-105 387.9 363 55.6
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 4.6e-105 386.3 686 39.7
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 7.8e-105 385.6 697 39.2
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 1.0e-104 385.2 559 44.0
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 1.0e-104 385.2 668 40.7
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 1.1e-103 381.7 706 37.7
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 4.7e-102 376.3 692 37.7
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 7.6e-100 369.0 695 38.6
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 3.8e-99 366.7 195 88.2
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 3.5e-97 360.1 696 37.4
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 7.8e-97 359.0 680 37.8
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 3.0e-96 357.1 679 37.3
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 7.3e-95 352.4 698 37.1
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 8.1e-94 349.0 676 37.1
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 1.3e-91 341.7 576 43.4
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 1.3e-91 341.7 362 51.7
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 2.2e-91 340.9 324 55.9
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 2.9e-91 340.5 397 49.1
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 8.4e-91 339.0 239 76.6
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 1.3e-88 331.6 208 74.5
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 7.3e-87 325.9 642 37.2
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 3.1e-85 320.5 343 52.5
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 9.9e-84 315.5 577 39.0
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 2.9e-83 313.9 283 58.0
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 2.9e-83 313.9 293 58.4
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 1.9e-82 311.2 321 51.4
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 2.4e-82 310.8 368 48.6
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 2.5e-79 300.8 233 63.1
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 3.0e-72 277.3 362 50.0
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 1.3e-62 245.4 388 41.2
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 1.8e-61 241.5 347 41.2
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 2.6e-60 237.7 250 50.8
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 3.4e-60 237.3 266 45.5
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 1.2e-52 212.2 246 48.4
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 5.9e-52 209.9 252 40.5
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 1.3e-51 208.8 116 80.2
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 1.4e-50 205.3 182 53.3
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 3.2e-50 204.1 120 79.2
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 1.2e-44 185.7 242 47.9
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 3.5e-44 184.1 510 32.4
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 1.1e-42 179.1 289 42.6
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 3.3e-39 167.5 588 28.4
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 5.2e-32 143.7 203 45.8
Oeu032321.1 Olea europaea HOM05D006714 ORTHO05D008103 1.2e-07 62.8 211 32.2
Atru.chr1.1941 Acer truncatum HOM05D006714 ORTHO05D008103 1.3e-06 59.3 131 34.4


User provided reference genes

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