Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000200g0170 Nicotiana tabacum HOM05D003611 ORTHO05D004281 0.0e+00 1932.9 1017 100.0
Nitab4.5_0000690g0050 Nicotiana tabacum HOM05D003611 ORTHO05D004281 0.0e+00 1810.4 1001 95.8
Peaxi162Scf00585g00319 Petunia axillaris HOM05D003611 ORTHO05D004281 0.0e+00 1434.9 1001 79.1
Sopen10g005780 Solanum pennellii HOM05D003611 ORTHO05D004281 0.0e+00 1327.0 993 72.8
Solyc10g012030.4 Solanum lycopersicum HOM05D003611 ORTHO05D004281 0.0e+00 1313.1 987 72.5
Sopen01g038800 Solanum pennellii HOM05D003611 ORTHO05D004281 1.4e-294 1016.5 1015 59.9
Peaxi162Scf00020g01228 Petunia axillaris HOM05D003611 ORTHO05D004281 5.8e-293 1011.1 1010 59.2
Nitab4.5_0010703g0040 Nicotiana tabacum HOM05D003611 ORTHO05D004281 1.9e-291 1006.1 1015 59.5
Solyc01g095020.3 Solanum lycopersicum HOM05D003611 ORTHO05D004281 2.1e-290 1002.7 1017 59.3
Dinv43856 Davidia involucrata HOM05D003611 ORTHO05D004281 1.3e-231 807.4 1036 49.5
Nitab4.5_0000915g0210 Nicotiana tabacum HOM05D003611 ORTHO05D004281 5.0e-228 795.4 1009 49.7
Cc02_g38450 Coffea canephora HOM05D003611 ORTHO05D004281 3.0e-212 743.0 1034 47.4
CSS0038908 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 2.7e-205 719.9 1028 47.1
CSS0009973 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 6.2e-202 708.8 1043 46.2
Dinv32512 Davidia involucrata HOM05D003611 ORTHO05D004281 2.8e-186 656.8 915 47.1
CiPaw.01G065700 Carya illinoinensis HOM05D003611 ORTHO05D004281 4.3e-179 632.9 1045 41.6
Prupe.2G176000 Prunus persica HOM05D003611 ORTHO05D004281 1.4e-177 627.9 1054 41.8
QL04p055101 Quercus lobata HOM05D003611 ORTHO05D004281 3.8e-175 619.8 1069 42.1
Cfa003881 Carpinus fangiana HOM05D003611 ORTHO05D004281 1.1e-174 618.2 1034 41.5
Actinidia18539 Actinidia chinensis HOM05D003611 ORTHO05D004281 3.2e-174 616.7 1038 44.2
MSTRG.4840 Avicennia marina HOM05D003611 ORTHO05D004281 4.6e-173 612.8 1018 40.9
Rhsim07G0011300 Rhododendron simsii HOM05D003611 ORTHO05D004281 6.3e-170 602.4 1082 40.3
RcHm_v2.0_Chr1g0357311 Rosa chinensis HOM05D003611 ORTHO05D004281 8.2e-170 602.1 1055 41.7
Thecc.01G353800 Theobroma cacao HOM05D003611 ORTHO05D004281 1.4e-169 601.3 1044 42.4
Ciclev10018621m.g Citrus clementina HOM05D003611 ORTHO05D004281 9.0e-169 598.6 1043 41.8
COL.COLO4_12765 Corchorus olitorius HOM05D003611 ORTHO05D004281 1.4e-166 591.3 1049 42.6
TAR375G0370 Trochodendron aralioides HOM05D003611 ORTHO05D004281 5.5e-166 589.3 1052 39.9
Manes.05G030300 Manihot esculenta HOM05D003611 ORTHO05D004281 2.1e-165 587.4 1046 43.0
Atru.chr5.552 Acer truncatum HOM05D003611 ORTHO05D004281 6.7e-164 582.4 1024 42.5
DCAR_008631 Daucus carota HOM05D003611 ORTHO05D004281 2.5e-163 580.5 1049 41.0
Lj7A508G38 Lonicera japonica HOM05D003611 ORTHO05D004281 2.5e-163 580.5 1044 43.9
FAN06G4234 Fragaria x ananassa HOM05D003611 ORTHO05D004281 2.8e-162 577.0 1068 39.8
FvH4_7g15120 Fragaria vesca HOM05D003611 ORTHO05D004281 8.2e-162 575.5 1070 39.7
Oeu018963.2 Olea europaea HOM05D003611 ORTHO05D004281 2.0e-160 570.9 1102 38.2
CiPaw.02G033900 Carya illinoinensis HOM05D003611 ORTHO05D004281 5.9e-160 569.3 1049 39.2
FAN03G1353 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.7e-159 567.8 1068 39.5
Potri.014G089200 Populus trichocarpa HOM05D003611 ORTHO05D004281 5.0e-159 566.2 1039 40.5
Haze_15553 Corylus avellana HOM05D003611 ORTHO05D004281 6.5e-159 565.8 1011 40.0
Nn1g01656 Nelumbo nucifera HOM05D003611 ORTHO05D004281 6.5e-159 565.8 1040 41.0
Migut.B01791 Erythranthe guttata HOM05D003611 ORTHO05D004281 1.4e-158 564.7 1029 39.9
FAN06G0771 Fragaria x ananassa HOM05D003611 ORTHO05D004281 3.2e-158 563.5 1070 39.4
MD01G1069900 Malus domestica HOM05D003611 ORTHO05D004281 5.5e-158 562.8 1054 41.0
MSTRG.20858 Avicennia marina HOM05D003611 ORTHO05D004281 7.2e-158 562.4 1028 38.7
FAN10G4104 Fragaria x ananassa HOM05D003611 ORTHO05D004281 3.6e-157 560.1 1068 39.9
FAN10G1370 Fragaria x ananassa HOM05D003611 ORTHO05D004281 6.1e-157 559.3 1068 39.8
FAN01G0094 Fragaria x ananassa HOM05D003611 ORTHO05D004281 7.9e-157 558.9 1061 40.0
Duzib133G0517 Durio zibethinus HOM05D003611 ORTHO05D004281 2.6e-155 553.9 1051 41.5
Potri.002G163000 Populus trichocarpa HOM05D003611 ORTHO05D004281 1.7e-154 551.2 1049 40.3
Ca_00818_v3 Cicer arietinum L. HOM05D003611 ORTHO05D004281 1.4e-153 548.1 1040 41.1
Sabra02G0147500 Salix brachista HOM05D003611 ORTHO05D004281 4.1e-153 546.6 1032 40.0
Sabra14G0064800 Salix brachista HOM05D003611 ORTHO05D004281 9.1e-153 545.4 1040 39.6
GSVIVG01026955001 Vitis vinifera HOM05D003611 ORTHO05D004281 1.7e-151 541.2 1001 38.4
Glyma.18G237600 Glycine max HOM05D003611 ORTHO05D004281 1.5e-150 538.1 1042 39.3
Glyma.09G255400 Glycine max HOM05D003611 ORTHO05D004281 2.5e-150 537.3 1046 40.3
Cpa.g.sc184.26 Carica papaya HOM05D003611 ORTHO05D004281 9.4e-150 535.4 1081 40.5
Actinidia20152 Actinidia chinensis HOM05D003611 ORTHO05D004281 2.1e-149 534.3 1028 37.7
MD07G1132600 Malus domestica HOM05D003611 ORTHO05D004281 2.1e-149 534.3 1033 40.8
TWI14G0836 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 8.0e-149 532.3 1024 39.9
Gohir.A11G091600 Gossypium hirsutum HOM05D003611 ORTHO05D004281 2.2e-146 524.2 1054 39.0
Lj1g0014988 Lotus japonicus HOM05D003611 ORTHO05D004281 9.1e-145 518.8 1042 40.2
Gohir.D11G096300 Gossypium hirsutum HOM05D003611 ORTHO05D004281 7.7e-144 515.8 1048 38.5
Gorai.007G102600 Gossypium raimondii HOM05D003611 ORTHO05D004281 3.8e-143 513.5 1074 37.8
vmacro13239 Vaccinium macrocarpon HOM05D003611 ORTHO05D004281 8.5e-143 512.3 1127 35.8
Actinidia10062 Actinidia chinensis HOM05D003611 ORTHO05D004281 1.9e-142 511.1 788 42.6
Oeu015220.3 Olea europaea HOM05D003611 ORTHO05D004281 4.7e-141 506.5 907 40.2
TWI59G0398 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 4.7e-141 506.5 1027 39.4
arahy.Tifrunner.gnm1.ann1.I9FVBP Arachis hypogaea HOM05D003611 ORTHO05D004281 2.3e-140 504.2 1034 39.5
ClCG05G001310 Citrullus lanatus HOM05D003611 ORTHO05D004281 6.8e-140 502.7 1047 37.4
DCAR_006945 Daucus carota HOM05D003611 ORTHO05D004281 1.2e-139 501.9 1039 38.8
TWI23G0144 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 7.5e-139 499.2 1024 38.8
Duzib138G0252 Durio zibethinus HOM05D003611 ORTHO05D004281 9.8e-139 498.8 959 41.8
Psat3g107120 Pisum sativum HOM05D003611 ORTHO05D004281 9.8e-139 498.8 1038 38.8
VMungo1383G2804 Vigna mungo HOM05D003611 ORTHO05D004281 1.3e-138 498.4 1044 39.8
MELO3C006087.2 Cucumis melo HOM05D003611 ORTHO05D004281 1.7e-138 498.0 1052 36.5
Gohir.A11G091700 Gossypium hirsutum HOM05D003611 ORTHO05D004281 2.8e-138 497.3 1049 37.8
CANSAT56G4470 Cannabis sativa HOM05D003611 ORTHO05D004281 3.7e-138 496.9 1060 37.9
Gohir.D11G096500 Gossypium hirsutum HOM05D003611 ORTHO05D004281 6.3e-138 496.1 1050 37.8
Gorai.007G102800 Gossypium raimondii HOM05D003611 ORTHO05D004281 6.3e-138 496.1 1050 37.8
Phvul.008G059100 Phaseolus vulgaris HOM05D003611 ORTHO05D004281 9.1e-137 492.3 1033 39.7
Sed0010511 Sechium edule HOM05D003611 ORTHO05D004281 1.6e-136 491.5 1038 38.1
Medtr7g078820 Medicago truncatula HOM05D003611 ORTHO05D004281 1.0e-135 488.8 1038 37.7
CsaV3_3G008680 Cucumis sativus L. HOM05D003611 ORTHO05D004281 1.7e-135 488.0 1052 36.0
EL10Ac1g00365 Beta vulgaris HOM05D003611 ORTHO05D004281 4.2e-134 483.4 1038 38.0
PGR042G1491 Punica granatum HOM05D003611 ORTHO05D004281 5.5e-134 483.0 1045 36.8
TPR.G22300 Trifolium pratense HOM05D003611 ORTHO05D004281 1.8e-132 478.0 1040 38.6
Eucgr.E00101 Eucalyptus grandis HOM05D003611 ORTHO05D004281 8.8e-132 475.7 1032 35.9
Sc23g0002620 Simmondsia chinensis HOM05D003611 ORTHO05D004281 2.9e-127 460.7 1008 36.1
Aqoxy7G00231 Aquilegia oxysepala HOM05D003611 ORTHO05D004281 1.1e-126 458.8 1035 36.5
AUR62004403 Chenopodium quinoa HOM05D003611 ORTHO05D004281 2.5e-126 457.6 1025 37.5
Manes.01G253100 Manihot esculenta HOM05D003611 ORTHO05D004281 3.3e-126 457.2 1029 36.7
ECA234G2210 Erigeron canadensis HOM05D003611 ORTHO05D004281 1.6e-125 454.9 1014 37.0
Hund16671 Selenicereus undatus HOM05D003611 ORTHO05D004281 1.3e-122 445.3 1035 36.8
AUR62022609 Chenopodium quinoa HOM05D003611 ORTHO05D004281 1.7e-122 444.9 1031 36.6
Lalb_Chr10g0096711 Lupinus albus HOM05D003611 ORTHO05D004281 2.2e-122 444.5 1002 37.0
Sc01g0003270 Simmondsia chinensis HOM05D003611 ORTHO05D004281 2.9e-122 444.1 936 37.2
Sed0009698 Sechium edule HOM05D003611 ORTHO05D004281 8.3e-122 442.6 1038 35.9
Hund27250 Selenicereus undatus HOM05D003611 ORTHO05D004281 7.8e-120 436.0 1025 35.4
HanXRQChr17g0562341 Helianthus annuus HOM05D003611 ORTHO05D004281 4.3e-118 430.3 1027 36.6
Lalb_Chr17g0339111 Lupinus albus HOM05D003611 ORTHO05D004281 1.2e-117 428.7 1001 36.4
arahy.Tifrunner.gnm1.ann1.9C73IW Arachis hypogaea HOM05D003611 ORTHO05D004281 1.6e-117 428.3 1029 37.1
MBI11_g13553_MAGBIO Magnolia biondii HOM05D003611 ORTHO05D004281 1.2e-115 422.2 1066 35.0
Lalb_Chr04g0259241 Lupinus albus HOM05D003611 ORTHO05D004281 4.4e-115 420.2 1012 35.8
Lsat_1_v5_gn_4_35681 Lactuca sativa HOM05D003611 ORTHO05D004281 1.6e-112 411.8 1031 35.2
PSO478G2290 Papaver somniferum HOM05D003611 ORTHO05D004281 2.3e-111 407.9 1046 33.2
Hma1.2p1_0627F.1_g191700 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 6.6e-111 406.4 850 36.9
PSO782G0890 Papaver somniferum HOM05D003611 ORTHO05D004281 1.4e-108 398.7 1047 33.0
THA.LOC104825859 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 8.1e-101 372.9 1012 32.4
Carub.0006s3636 Capsella rubella HOM05D003611 ORTHO05D004281 1.5e-99 368.6 1015 33.4
AL6G52100 Arabidopsis lyrata HOM05D003611 ORTHO05D004281 2.1e-96 358.2 1021 33.1
Lalb_Chr17g0339131 Lupinus albus HOM05D003611 ORTHO05D004281 3.5e-96 357.5 1002 32.4
AT4G01290 Arabidopsis thaliana HOM05D003611 ORTHO05D004281 4.7e-93 347.1 1019 34.2
CARHR249020 Cardamine hirsuta HOM05D003611 ORTHO05D004281 6.2e-93 346.7 1015 35.1
Sp6g00840 Schrenkiella parvula HOM05D003611 ORTHO05D004281 5.2e-92 343.6 1043 32.7
Thhalv10028394m.g Eutrema salsugineum HOM05D003611 ORTHO05D004281 7.1e-89 333.2 1022 33.1
THA.LOC104817035 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 4.6e-88 330.5 1018 32.5
THA.LOC104801395 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 1.5e-86 325.5 1049 31.8
Aa31LG5G730 Aethionema arabicum HOM05D003611 ORTHO05D004281 2.8e-85 321.2 964 32.0
SalBow3G4181 Salvia bowleyana HOM05D003611 ORTHO05D004281 4.8e-85 320.5 497 44.7
A09p00050 Brassica napus HOM05D003611 ORTHO05D004281 2.6e-83 314.7 1023 32.3
BcaB01g02283 Brassica carinata HOM05D003611 ORTHO05D004281 3.4e-83 314.3 1016 33.1
Aa31LG5G740 Aethionema arabicum HOM05D003611 ORTHO05D007544 4.4e-83 313.9 1012 31.2
BraA09t35736Z Brassica rapa HOM05D003611 ORTHO05D004281 1.3e-82 312.4 1028 33.6
BcaC04g24140 Brassica carinata HOM05D003611 ORTHO05D004281 2.1e-80 305.1 1036 33.8
A03p31960 Brassica napus HOM05D003611 ORTHO05D004281 3.5e-80 304.3 1022 33.3
C09p00670 Brassica napus HOM05D003611 ORTHO05D004281 4.6e-80 303.9 1036 33.8
BolC9t53001H Brassica oleracea HOM05D003611 ORTHO05D004281 4.6e-80 303.9 1036 33.8
BraA03t12368Z Brassica rapa HOM05D003611 ORTHO05D004281 7.9e-80 303.1 1022 33.3
BcaC01g06854 Brassica carinata HOM05D003611 ORTHO05D004281 1.9e-78 298.5 1032 31.1
C03p38980 Brassica napus HOM05D003611 ORTHO05D004281 5.6e-78 297.0 1030 30.8
BolC3t16170H Brassica oleracea HOM05D003611 ORTHO05D004281 5.6e-78 297.0 1032 31.1
unitig_8.g3336 Utricularia gibba HOM05D003611 ORTHO05D004281 7.4e-78 296.6 882 31.2
SGA_v2.0_scaffold4G02289 Striga asiatica HOM05D003611 ORTHO05D004281 6.9e-76 290.0 491 42.6
BcaB01g02151 Brassica carinata HOM05D003611 ORTHO05D004281 1.5e-75 288.9 994 31.1
Os06g0105900 Oryza sativa ssp. japonica HOM05D003611 ORTHO05D004281 1.5e-75 288.9 951 31.9
CDE11G0274 Ceratophyllum demersum HOM05D003611 ORTHO05D004281 3.2e-73 281.2 1049 29.8
Zm00001eb374330 Zea mays HOM05D003611 ORTHO05D004281 1.3e-71 275.8 958 30.6
CDE09G0589 Ceratophyllum demersum HOM05D003611 ORTHO05D004281 5.1e-71 273.9 1043 29.1
ATR0661G469 Amborella trichopoda HOM05D003611 ORTHO05D004281 6.2e-69 266.9 608 36.0
SalBow3G3040 Salvia bowleyana HOM05D003611 ORTHO05D004281 2.4e-68 265.0 535 37.8
BcaB05g23959 Brassica carinata HOM05D003611 ORTHO05D004281 1.6e-64 252.3 685 33.4
Lalb_Chr04g0259231 Lupinus albus HOM05D003611 ORTHO05D004281 2.3e-63 248.4 614 34.5
Ah.05g180230 Amaranthus hybridus HOM05D003611 ORTHO05D007544 7.2e-57 226.9 616 34.3
Actinidia02822 Actinidia chinensis HOM05D003611 ORTHO05D004281 8.5e-50 203.4 220 51.4
unitig_22.g6727 Utricularia gibba HOM05D003611 ORTHO05D004281 1.4e-47 196.1 845 28.6
Ah.05g180220 Amaranthus hybridus HOM05D003611 ORTHO05D004281 2.2e-45 188.7 421 36.1
TAR374G1053 Trochodendron aralioides HOM05D003611 ORTHO05D004281 4.1e-44 184.5 623 29.7
Hma1.2p1_0623F.1_g191000 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 1.0e-39 169.9 190 54.2
HPP92_002731 Vanilla planifolia HOM05D003611 ORTHO05D004281 1.1e-38 166.4 490 36.7
Actinidia02823 Actinidia chinensis HOM05D003611 ORTHO05D004281 2.2e-34 152.1 354 34.7
TAR374G0905 Trochodendron aralioides HOM05D003611 ORTHO05D004281 1.3e-29 136.3 207 41.5
Lalb_Chr04g0259211 Lupinus albus HOM05D003611 ORTHO05D004281 8.2e-29 133.7 183 45.9
Pp3c19_15630 Physcomitrium patens HOM05D025697 ORTHO05D004281 9.4e-25 120.2 647 28.0
Hma1.2p1_2961F.1_g330880 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 6.8e-23 114.0 266 37.2
Hma1.2p1_0623F.1_g191005 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 2.0e-22 112.5 131 48.9
Duzib268G1133 Durio zibethinus HOM05D003611 ORTHO05D004281 3.4e-22 111.7 137 44.5
GSVIVG01028853001 Vitis vinifera HOM05D003611 ORTHO05D004281 3.4e-22 111.7 497 26.6
Cfa016292 Carpinus fangiana HOM05D003611 ORTHO05D004281 9.8e-22 110.2 254 35.8
QL09p012690 Quercus lobata HOM05D003611 ORTHO05D004281 1.3e-21 109.8 274 34.3
Pp3c18_8750 Physcomitrium patens HOM05D025697 ORTHO05D004281 2.4e-20 105.5 628 26.9
Haze_00050 Corylus avellana HOM05D003611 ORTHO05D004281 9.1e-20 103.6 261 36.0
Mapoly0012s0024 Marchantia polymorpha HOM05D003611 ORTHO05D021332 5.0e-18 97.8 702 23.2
SEGI_14695 Sequoiadendron giganteum HOM05D003611 ORTHO05D004281 1.9e-17 95.9 344 30.2
Dinv32513 Davidia involucrata HOM05D003611 ORTHO05D004281 5.5e-17 94.4 81 60.5
unitig_22.g6726 Utricularia gibba HOM05D003611 ORTHO05D004281 3.0e-15 88.6 136 43.4
ATR0661G048 Amborella trichopoda HOM05D003611 ORTHO05D004281 5.2e-15 87.8 211 36.0
Thecc.03G184800 Theobroma cacao HOM05D003611 ORTHO05D011897 8.8e-15 87.0 136 44.1
Duzib205G1157 Durio zibethinus HOM05D003611 ORTHO05D011897 2.2e-13 82.4 155 38.7
Atru.chr1.351 Acer truncatum HOM05D003611 ORTHO05D004281 4.9e-13 81.3 155 41.3
HPP92_002605 Vanilla planifolia HOM05D046274 ORTHO05D004281 2.4e-12 79.0 395 27.1
SEGI_21460 Sequoiadendron giganteum HOM05D003611 ORTHO05D004281 2.7e-11 75.5 352 26.7
Gohir.A11G012500 Gossypium hirsutum HOM05D003611 ORTHO05D011897 2.3e-10 72.4 260 33.5
Gorai.007G013100 Gossypium raimondii HOM05D003611 ORTHO05D011897 2.9e-10 72.0 277 33.2
TWI23G0357 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 2.9e-10 72.0 212 35.4
Ciclev10006595m.g Citrus clementina HOM05D003611 ORTHO05D004281 1.1e-09 70.1 155 40.0
Gohir.D11G011700 Gossypium hirsutum HOM05D003611 ORTHO05D011897 3.3e-09 68.6 288 32.3
Dinv35257 Davidia involucrata HOM05D003611 ORTHO05D004281 3.6e-08 65.1 268 29.1


User provided reference genes

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