Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000195g0180 Nicotiana tabacum HOM05D005836 ORTHO05D007335 1.2e-121 439.9 218 100.0
Nitab4.5_0002399g0060 Nicotiana tabacum HOM05D005836 ORTHO05D007335 7.5e-97 357.5 216 85.6
Peaxi162Scf00293g00715 Petunia axillaris HOM05D005836 ORTHO05D007335 6.4e-96 354.4 224 82.6
Nitab4.5_0002985g0050 Nicotiana tabacum HOM05D005836 ORTHO05D007335 3.5e-94 348.6 223 79.8
Nitab4.5_0002641g0060 Nicotiana tabacum HOM05D005836 ORTHO05D007335 6.6e-93 344.4 223 79.8
Peaxi162Scf00372g00716 Petunia axillaris HOM05D005836 ORTHO05D007335 1.6e-86 323.2 213 79.8
PGSC0003DMG400020645 Solanum tuberosum HOM05D005836 ORTHO05D007335 7.3e-84 314.3 223 74.4
Sopen06g002640 Solanum pennellii HOM05D005836 ORTHO05D007335 2.1e-83 312.8 223 74.4
Solyc06g007760.4 Solanum lycopersicum HOM05D005836 ORTHO05D007335 4.7e-83 311.6 221 74.2
Cc01_g15580 Coffea canephora HOM05D005836 ORTHO05D007335 2.6e-81 305.8 224 71.4
CAN.G869.16 Capsicum annuum HOM05D005836 ORTHO05D007335 3.2e-79 298.9 225 72.0
CSS0005992 Camellia sinensis var. sinensis HOM05D005836 ORTHO05D007335 6.0e-70 268.1 225 65.8
Oeu023901.1 Olea europaea HOM05D005836 ORTHO05D007335 5.1e-69 265.0 216 65.3
Lj1C109T5 Lonicera japonica HOM05D005836 ORTHO05D007335 4.8e-67 258.5 210 64.8
SalBow2G1106 Salvia bowleyana HOM05D005836 ORTHO05D007335 4.8e-67 258.5 227 63.9
Hma1.2p1_0161F.1_g071980 Hydrangea macrophylla HOM05D005836 ORTHO05D007335 1.1e-66 257.3 227 63.0
Actinidia34513 Actinidia chinensis HOM05D005836 ORTHO05D007335 9.9e-65 250.8 225 63.6
MSTRG.17936 Avicennia marina HOM05D005836 ORTHO05D007335 2.2e-64 249.6 225 65.3
HanXRQChr01g0013111 Helianthus annuus HOM05D005836 ORTHO05D007335 2.2e-64 249.6 213 61.0
QL01p023477 Quercus lobata HOM05D005836 ORTHO05D007335 3.8e-64 248.8 236 61.0
Rhsim01G0245400 Rhododendron simsii HOM05D005836 ORTHO05D007335 6.4e-64 248.1 222 64.4
QL01p023545 Quercus lobata HOM05D005836 ORTHO05D007335 8.4e-64 247.7 236 60.6
Dinv28763 Davidia involucrata HOM05D005836 ORTHO05D007335 1.1e-63 247.3 235 60.4
Glyma.11G201500 Glycine max HOM05D005836 ORTHO05D007335 1.1e-63 247.3 185 73.0
SGA_v2.0_scaffold77G25345 Striga asiatica HOM05D005836 ORTHO05D007335 2.4e-63 246.1 226 61.1
Lsat_1_v5_gn_5_176900 Lactuca sativa HOM05D005836 ORTHO05D007335 3.2e-63 245.7 171 70.8
Glyma.18G049400 Glycine max HOM05D005836 ORTHO05D007335 1.6e-62 243.4 232 61.6
FAN16G0502 Fragaria x ananassa HOM05D005836 ORTHO05D007335 2.7e-62 242.7 187 67.9
FAN21G0342 Fragaria x ananassa HOM05D005836 ORTHO05D007335 2.7e-62 242.7 187 67.9
VMungo0540G1704 Vigna mungo HOM05D005836 ORTHO05D007335 7.9e-62 241.1 230 61.3
GSVIVG01024524001 Vitis vinifera HOM05D005836 ORTHO05D007335 1.3e-61 240.4 170 72.4
FvH4_3g41200 Fragaria vesca HOM05D005836 ORTHO05D007335 2.3e-61 239.6 187 67.4
PSO339G6500 Papaver somniferum HOM05D005836 ORTHO05D007335 5.1e-61 238.4 215 64.2
Manes.18G122400 Manihot esculenta HOM05D005836 ORTHO05D007335 6.7e-61 238.0 186 69.4
Lalb_Chr17g0345731 Lupinus albus HOM05D005836 ORTHO05D007335 8.7e-61 237.7 188 67.6
Cfa011862 Carpinus fangiana HOM05D005836 ORTHO05D007335 1.1e-60 237.3 168 74.4
Thecc.09G366400 Theobroma cacao HOM05D005836 ORTHO05D007335 1.1e-60 237.3 190 65.8
Phvul.006G082200 Phaseolus vulgaris HOM05D005836 ORTHO05D007335 1.5e-60 236.9 185 69.7
PSO384G1899 Papaver somniferum HOM05D005836 ORTHO05D007335 1.9e-60 236.5 215 63.3
Lalb_Chr10g0103941 Lupinus albus HOM05D005836 ORTHO05D007335 2.5e-60 236.1 195 65.6
DCAR_018590 Daucus carota HOM05D005836 ORTHO05D007335 3.3e-60 235.7 162 74.1
Potri.013G161000 Populus trichocarpa HOM05D005836 ORTHO05D007335 3.3e-60 235.7 173 69.9
arahy.Tifrunner.gnm1.ann1.JICC5Y Arachis hypogaea HOM05D005836 ORTHO05D007335 4.3e-60 235.3 228 60.5
Ciclev10002134m.g Citrus clementina HOM05D005836 ORTHO05D007335 7.4e-60 234.6 163 74.2
COL.COLO4_11235 Corchorus olitorius HOM05D005836 ORTHO05D007335 9.6e-60 234.2 178 68.0
TAR633G1361 Trochodendron aralioides HOM05D005836 ORTHO05D007335 9.6e-60 234.2 173 72.3
arahy.Tifrunner.gnm1.ann1.R5IFJT Arachis hypogaea HOM05D005836 ORTHO05D007335 1.6e-59 233.4 228 60.1
RcHm_v2.0_Chr5g0074011 Rosa chinensis HOM05D005836 ORTHO05D007335 1.6e-59 233.4 154 74.7
Ca_15089_v3 Cicer arietinum L. HOM05D005836 ORTHO05D007335 2.1e-59 233.0 230 58.7
Sabra13G0128800 Salix brachista HOM05D005836 ORTHO05D007335 2.1e-59 233.0 164 73.2
arahy.Tifrunner.gnm1.ann1.IJ2DEQ Arachis hypogaea HOM05D005836 ORTHO05D007335 2.8e-59 232.6 229 60.3
CDE07G0908 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 6.2e-59 231.5 218 61.5
MELO3C019598.2 Cucumis melo HOM05D005836 ORTHO05D007335 8.1e-59 231.1 223 61.9
CsaV3_6G013260 Cucumis sativus L. HOM05D005836 ORTHO05D007335 8.1e-59 231.1 215 60.5
ClCG02G018930 Citrullus lanatus HOM05D005836 ORTHO05D007335 1.4e-58 230.3 223 61.4
ECA248G3143 Erigeron canadensis HOM05D005836 ORTHO05D007335 1.8e-58 229.9 189 63.0
MD11G1049300 Malus domestica HOM05D005836 ORTHO05D007335 2.4e-58 229.6 172 68.0
Haze_24497 Corylus avellana HOM05D005836 ORTHO05D007335 4.0e-58 228.8 180 68.3
Gohir.D03G146100 Gossypium hirsutum HOM05D005836 ORTHO05D007335 6.9e-58 228.0 164 70.1
Gohir.A03G022600 Gossypium hirsutum HOM05D005836 ORTHO05D007335 9.0e-58 227.6 164 70.1
Lj6g0005555 Lotus japonicus HOM05D005836 ORTHO05D007335 9.0e-58 227.6 189 66.1
Sed0001744 Sechium edule HOM05D005836 ORTHO05D007335 2.0e-57 226.5 222 58.6
Aqoxy2G00686 Aquilegia oxysepala HOM05D005836 ORTHO05D007335 2.6e-57 226.1 238 57.1
MD03G1046500 Malus domestica HOM05D005836 ORTHO05D007335 2.6e-57 226.1 186 62.4
Medtr3g062920 Medicago truncatula HOM05D005836 ORTHO05D007335 2.6e-57 226.1 182 64.3
PGR119G1588 Punica granatum HOM05D005836 ORTHO05D007335 2.6e-57 226.1 230 55.7
Eucgr.L00742 Eucalyptus grandis HOM05D005836 ORTHO05D007335 3.4e-57 225.7 177 67.8
TPR.G13816 Trifolium pratense HOM05D005836 ORTHO05D007335 9.9e-57 224.2 167 68.9
CANSAT54G2930 Cannabis sativa HOM05D005836 ORTHO05D007335 2.9e-56 222.6 224 57.1
Thhalv10014671m.g Eutrema salsugineum HOM05D005836 ORTHO05D007335 4.9e-56 221.9 163 70.6
CiPaw.13G059700 Carya illinoinensis HOM05D005836 ORTHO05D007335 8.4e-56 221.1 152 72.4
AUR62027208 Chenopodium quinoa HOM05D005836 ORTHO05D007335 1.1e-55 220.7 228 55.7
Duzib168G0065 Durio zibethinus HOM05D005836 ORTHO05D007335 1.1e-55 220.7 152 73.0
vmacro14659 Vaccinium macrocarpon HOM05D005836 ORTHO05D007335 1.1e-55 220.7 305 47.2
Nn5g26758 Nelumbo nucifera HOM05D005836 ORTHO05D007335 1.4e-55 220.3 228 56.6
A03p12350 Brassica napus HOM05D000347 ORTHO05D001997 1.9e-55 219.9 191 62.8
BraA03t10547Z Brassica rapa HOM05D000347 ORTHO05D001997 1.9e-55 219.9 191 62.8
Atru.chr10.2368 Acer truncatum HOM05D005836 ORTHO05D007335 3.2e-55 219.2 171 66.1
Os03g0331600 Oryza sativa ssp. japonica HOM05D005836 ORTHO05D007335 4.2e-55 218.8 145 75.2
TWI31G0503 Tripterygium wilfordii HOM05D005836 ORTHO05D007335 4.2e-55 218.8 204 61.3
unitig_60.g25569 Utricularia gibba HOM05D005836 ORTHO05D007335 1.2e-54 217.2 218 56.4
unitig_0.g428 Utricularia gibba HOM05D000994 ORTHO05D007335 2.1e-54 216.5 218 56.9
Psat5g146440 Pisum sativum HOM05D005836 ORTHO05D007335 2.7e-54 216.1 185 63.2
Sp6g19910 Schrenkiella parvula HOM05D005836 ORTHO05D007335 2.7e-54 216.1 163 67.5
Sc03g0000150 Simmondsia chinensis HOM05D005836 ORTHO05D007335 3.5e-54 215.7 143 73.4
THA.LOC104809827 Tarenaya hassleriana HOM05D005836 ORTHO05D007335 6.0e-54 214.9 163 66.9
Hund16557 Selenicereus undatus HOM05D005836 ORTHO05D007335 1.0e-53 214.2 133 78.9
BcaB01g04482 Brassica carinata HOM05D005836 ORTHO05D007335 1.3e-53 213.8 195 59.5
BcaB01g04542 Brassica carinata HOM05D005836 ORTHO05D007335 1.8e-53 213.4 215 55.3
A10p15970 Brassica napus HOM05D000347 ORTHO05D001997 1.8e-53 213.4 162 66.7
AT5G58250 Arabidopsis thaliana HOM05D005836 ORTHO05D007335 2.3e-53 213.0 163 66.3
AUR62003260 Chenopodium quinoa HOM05D005836 ORTHO05D007335 2.3e-53 213.0 230 55.2
Zm00001eb015790 Zea mays HOM05D005836 ORTHO05D007335 3.0e-53 212.6 149 70.5
BraA10t43628Z Brassica rapa HOM05D005836 ORTHO05D007335 3.9e-53 212.2 160 66.2
EL10As13g24050 Beta vulgaris HOM05D005836 ORTHO05D007335 5.1e-53 211.8 127 81.1
Aa31LG11G40 Aethionema arabicum HOM05D005836 ORTHO05D007335 6.7e-53 211.5 205 56.6
BcaC04g19899 Brassica carinata HOM05D005836 ORTHO05D007335 8.7e-53 211.1 160 66.2
C09p50080 Brassica napus HOM05D000347 ORTHO05D001997 8.7e-53 211.1 160 66.2
BolC9t57862H Brassica oleracea HOM05D005836 ORTHO05D007335 8.7e-53 211.1 160 66.2
CARHR272060 Cardamine hirsuta HOM05D005836 ORTHO05D007335 8.7e-53 211.1 160 65.0
Carub.0008s1879 Capsella rubella HOM05D005836 ORTHO05D007335 1.1e-52 210.7 163 65.6
Migut.N00709 Erythranthe guttata HOM05D005836 ORTHO05D007335 2.5e-52 209.5 211 55.9
AL8G34350 Arabidopsis lyrata HOM05D005836 ORTHO05D007335 2.1e-51 206.5 163 65.0
Manes.02G210261 Manihot esculenta HOM05D005836 ORTHO05D007335 2.1e-51 206.5 167 66.5
ATR1127G006 Amborella trichopoda HOM05D005836 ORTHO05D007335 3.1e-50 202.6 196 59.2
Oeu020454.1 Olea europaea HOM05D005836 ORTHO05D007335 3.1e-50 202.6 128 76.6
C03p14500 Brassica napus HOM05D000347 ORTHO05D001997 5.3e-50 201.8 132 74.2
BcaB01g04547 Brassica carinata HOM05D005836 ORTHO05D007335 4.5e-49 198.7 132 72.0
BolC3t13893H Brassica oleracea HOM05D000347 ORTHO05D001997 4.5e-49 198.7 132 72.0
MBI15_g05585_MAGBIO Magnolia biondii HOM05D005836 ORTHO05D007335 1.0e-48 197.6 124 77.4
SEGI_40201 Sequoiadendron giganteum HOM05D005836 ORTHO05D007335 1.0e-48 197.6 139 69.8
Ah.02g126180 Amaranthus hybridus HOM05D002324 ORTHO05D002380 2.2e-48 196.4 205 57.6
SGA_v2.0_scaffold77G25340 Striga asiatica HOM05D005836 ORTHO05D007335 1.6e-46 190.3 226 52.2
Mapoly0086s0004 Marchantia polymorpha HOM05D005836 ORTHO05D007335 2.5e-44 183.0 150 58.7
Pp3c13_24050 Physcomitrium patens HOM05D005836 ORTHO05D007335 1.6e-43 180.3 146 59.6
AagrBONN_evm.TU.Sc2ySwM_117.3281 Anthoceros agrestis HOM05D005836 ORTHO05D007335 3.7e-43 179.1 161 57.8
SMO358G0359 Selaginella moellendorffii HOM05D005836 ORTHO05D007335 8.2e-43 177.9 131 64.1
Pp3c4_20840 Physcomitrium patens HOM05D005836 ORTHO05D007335 3.1e-42 176.0 141 59.6
Pp3c4_20850 Physcomitrium patens HOM05D005836 ORTHO05D007335 3.1e-42 176.0 141 59.6
Pp3c3_13470 Physcomitrium patens HOM05D005836 ORTHO05D007335 5.0e-40 168.7 143 55.2
Prupe.6G037800 Prunus persica HOM05D005836 ORTHO05D007335 8.7e-37 157.9 136 66.2
CDE06G1816 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 3.7e-35 152.5 164 58.5
Peaxi162Scf00372g00721 Petunia axillaris HOM05D005836 ORTHO05D007335 5.3e-34 148.7 113 69.0
Manes.15G179716 Manihot esculenta HOM05D005836 ORTHO05D007335 1.4e-31 140.6 85 78.8
Manes.15G179664 Manihot esculenta HOM05D005836 ORTHO05D007335 4.2e-31 139.0 77 85.7
Manes.15G176000 Manihot esculenta HOM05D005836 ORTHO05D007335 3.9e-21 105.9 79 69.6
Actinidia23823 Actinidia chinensis HOM05D005836 ORTHO05D007335 5.2e-21 105.5 126 54.8
Cre12.g490500 Chlamydomonas reinhardtii HOM05D005836 ORTHO05D007335 8.8e-21 104.8 132 46.2
Aqoxy392s001 Aquilegia oxysepala HOM05D005836 ORTHO05D007335 1.0e-16 91.3 97 52.6
HanXRQChr11g0338221 Helianthus annuus HOM05D005836 ORTHO05D007335 1.3e-16 90.9 61 67.2
PRCOL_00000331 Prasinoderma coloniale HOM05D005836 ORTHO05D007335 1.3e-16 90.9 140 40.0
SGA_v2.0_scaffold120G33007 Striga asiatica HOM05D002254 ORTHO05D007410 6.5e-16 88.6 72 65.3
CAN.G297.12 Capsicum annuum HOM05D005836 ORTHO05D000001 8.5e-16 88.2 51 82.4
MCO04G442 Micromonas commoda HOM05D005836 ORTHO05D007335 8.5e-16 88.2 121 39.7
Cpa.g.sc2.251 Carica papaya HOM05D005836 ORTHO05D007335 3.2e-15 86.3 60 63.3
CAN.G297.11 Capsicum annuum HOM05D005836 ORTHO05D000001 6.7e-13 78.6 46 78.3
SMO173G0022 Selaginella moellendorffii HOM05D005836 ORTHO05D007335 3.1e-10 69.7 46 65.2
Cpa.g.sc2.250 Carica papaya HOM05D005836 ORTHO05D007335 7.0e-10 68.6 70 57.1


User provided reference genes

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