Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 3.3e-250 867.8 423 100.0
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 2.7e-236 821.6 423 94.1
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 5.4e-216 754.2 425 87.8
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 2.1e-212 742.3 423 85.6
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 3.6e-212 741.5 423 85.3
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 4.7e-212 741.1 423 85.3
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 1.9e-192 676.0 423 80.4
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 9.6e-165 583.9 425 66.6
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 4.0e-163 578.6 426 66.2
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 7.6e-162 574.3 416 67.8
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 1.9e-160 569.7 424 65.6
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 9.3e-160 567.4 415 67.5
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 4.6e-159 565.1 433 64.2
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 6.0e-159 564.7 428 65.9
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 1.3e-158 563.5 423 65.2
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 3.9e-158 562.0 425 63.8
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 1.9e-157 559.7 421 65.3
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 4.3e-157 558.5 426 63.8
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 1.1e-155 553.9 422 63.5
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 1.1e-155 553.9 416 65.9
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 1.4e-155 553.5 420 64.0
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 4.0e-155 552.0 416 63.2
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 5.3e-155 551.6 422 63.3
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 1.2e-154 550.4 434 62.0
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 2.0e-154 549.7 426 63.6
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 3.8e-153 545.4 414 63.8
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 5.5e-152 541.6 424 61.6
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 7.1e-152 541.2 431 61.3
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 1.6e-151 540.0 420 61.9
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 3.5e-151 538.9 413 62.0
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 6.0e-151 538.1 424 60.1
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 6.0e-151 538.1 422 60.4
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 1.8e-150 536.6 413 62.2
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 1.8e-150 536.6 423 61.5
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 2.3e-150 536.2 415 64.1
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 3.9e-150 535.4 417 63.8
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 6.7e-150 534.6 418 63.6
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 6.7e-150 534.6 418 63.6
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 8.7e-150 534.3 384 66.4
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 1.5e-149 533.5 416 61.5
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 4.3e-149 531.9 424 63.4
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 9.6e-149 530.8 426 61.7
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 1.3e-148 530.4 428 61.2
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 1.6e-148 530.0 424 62.3
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 2.6e-146 522.7 518 53.9
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 3.4e-146 522.3 383 65.8
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 4.9e-145 518.5 428 61.7
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 1.4e-144 516.9 426 61.7
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 2.5e-144 516.2 431 59.4
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 2.5e-144 516.2 412 61.7
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 3.2e-144 515.8 420 59.5
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 4.2e-144 515.4 413 59.8
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 5.5e-144 515.0 430 59.5
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 5.5e-144 515.0 426 62.2
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 1.2e-143 513.8 420 59.3
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 2.7e-143 512.7 423 60.3
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 8.7e-142 507.7 432 58.6
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 1.1e-141 507.3 411 60.8
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 2.5e-141 506.1 432 58.1
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 4.8e-140 501.9 417 59.7
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 8.2e-140 501.1 391 63.7
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.1e-139 500.7 406 59.6
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 1.3e-137 493.8 372 63.7
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 1.3e-137 493.8 438 57.5
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 2.2e-137 493.0 406 58.6
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 5.0e-137 491.9 420 57.4
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.1e-136 490.7 406 58.6
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 1.2e-135 487.3 419 55.8
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 4.8e-132 475.3 655 42.1
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 8.2e-132 474.6 377 61.3
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 2.4e-131 473.0 415 56.4
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 6.9e-131 471.5 412 56.1
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 1.0e-129 467.6 367 62.7
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 5.0e-129 465.3 416 55.5
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 1.4e-128 463.8 357 62.7
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 1.9e-128 463.4 397 55.4
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 2.1e-127 459.9 417 54.0
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 4.7e-127 458.8 406 56.2
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 7.9e-127 458.0 435 53.6
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 2.6e-125 453.0 355 62.5
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 7.4e-125 451.4 407 56.0
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 7.4e-125 451.4 407 56.0
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 1.3e-124 450.7 405 55.8
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 1.3e-124 450.7 412 55.6
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 1.3e-124 450.7 352 60.8
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 6.3e-124 448.4 427 54.8
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 1.8e-123 446.8 432 53.5
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 4.5e-122 442.2 402 55.5
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 7.7e-122 441.4 406 54.9
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 1.0e-121 441.0 435 52.6
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 2.1e-119 433.3 447 52.1
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 1.6e-111 407.1 408 50.0
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 1.0e-105 387.9 435 47.8
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 2.9e-105 386.3 306 63.7
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 8.8e-102 374.8 303 58.4
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.7e-84 317.4 294 54.8
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 1.6e-71 274.2 482 35.7
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 2.4e-67 260.4 457 37.0
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 2.1e-66 257.3 232 56.0
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 1.3e-60 238.0 272 46.0
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 2.3e-57 227.3 210 50.5
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 6.6e-57 225.7 191 59.2
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 1.4e-54 218.0 206 51.9
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 1.9e-48 197.6 186 53.2
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 4.9e-44 183.0 195 48.7
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 4.2e-43 179.9 149 61.1
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 1.3e-39 168.3 134 61.9
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 3.1e-38 163.7 294 35.7
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 9.0e-38 162.2 113 69.0
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 1.8e-25 121.3 110 52.7
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 8.2e-15 85.9 101 45.5
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 4.5e-13 80.1 79 43.0
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 1.7e-12 78.2 98 48.0
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 7.2e-11 72.8 73 57.5
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 4.4e-08 63.5 200 26.0
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 1.7e-07 61.6 50 60.0
MCO07G483 Micromonas commoda HOM05D006857 ORTHO05D008679 3.1e-06 57.4 220 25.9


User provided reference genes

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