Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000194g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-49 198.7 95 100.0
Nitab4.5_0001123g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-21 106.7 87 60.9
Nitab4.5_0005500g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-21 105.1 74 73.0
Nitab4.5_0001375g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-18 96.7 69 71.0
Nitab4.5_0003374g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-18 94.4 74 66.2
Nitab4.5_0000082g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-16 89.7 74 60.8
Nitab4.5_0000575g0250 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-16 89.4 74 60.8
Nitab4.5_0002591g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-15 86.3 74 58.1
Nitab4.5_0000106g0450 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-15 85.9 68 63.2
Nitab4.5_0002977g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-14 82.8 74 56.8
Nitab4.5_0000500g0260 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.9e-14 80.9 74 60.8
Nitab4.5_0002616g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-13 79.7 68 58.8
Nitab4.5_0009312g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-13 79.3 70 60.0
Nitab4.5_0000465g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.0e-13 77.8 69 55.1
Nitab4.5_0006838g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-12 76.3 74 52.7
Nitab4.5_0008161g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-12 76.3 74 50.0
Nitab4.5_0000538g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-12 75.5 74 54.1
Nitab4.5_0002847g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.5e-12 74.3 68 57.4
Nitab4.5_0000090g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-11 73.2 66 53.0
Nitab4.5_0001544g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-10 69.3 74 47.3
Nitab4.5_0001880g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-10 69.3 63 55.6
Nitab4.5_0004812g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-10 69.3 68 51.5
Nitab4.5_0006194g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.8e-10 67.4 68 48.5
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.8e-10 67.4 74 55.4
Nitab4.5_0003397g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-09 66.6 74 50.0
Nitab4.5_0000171g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-08 63.2 87 46.0
Nitab4.5_0001146g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-08 63.2 74 43.2
Nitab4.5_0000961g0170 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-08 62.8 52 59.6
Nitab4.5_0000457g0470 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-08 62.4 74 48.6
Nitab4.5_0003315g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-08 61.6 75 48.0
Nitab4.5_0006719g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-07 60.1 76 44.7
Nitab4.5_0015178g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-07 58.5 76 47.4
Nitab4.5_0002737g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-06 56.2 74 44.6
Nitab4.5_0015200g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-06 55.8 69 44.9
Nitab4.5_0002164g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-06 55.1 63 44.4
Nitab4.5_0011088g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-06 55.1 76 46.1
Nitab4.5_0000063g0330 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.9e-06 54.3 70 45.7


User provided reference genes

Program Settings