Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000194g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.5e-79 297.4 154 100.0
Nitab4.5_0000952g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-44 181.8 170 64.7
Nitab4.5_0000573g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-36 156.8 147 60.5
Nitab4.5_0006324g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.7e-26 123.2 126 61.9
Nitab4.5_0005500g0060 Nicotiana tabacum HOM05D000024 ORTHO05D284227 1.1e-17 94.0 56 87.5
Nitab4.5_0000096g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.0e-16 88.2 167 40.1
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-12 76.3 40 82.5
Nitab4.5_0000961g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-12 75.9 40 85.0
Nitab4.5_0002966g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-12 75.5 46 76.1
Nitab4.5_0000370g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-11 72.8 40 82.5
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.4e-11 72.4 40 80.0
Nitab4.5_0004658g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.5e-11 72.0 40 80.0
Nitab4.5_0005500g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.6e-11 71.2 40 85.0
Nitab4.5_0000098g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-10 70.1 164 36.6
Nitab4.5_0008161g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-10 70.1 39 82.1
Nitab4.5_0000465g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-10 69.7 40 77.5
Nitab4.5_0000164g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-10 69.3 145 39.3
Nitab4.5_0005284g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-10 69.3 40 75.0
Nitab4.5_0003397g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-10 68.6 39 79.5
Nitab4.5_0004621g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.4e-10 68.2 82 47.6
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.4e-10 67.8 148 34.5
Nitab4.5_0002061g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-09 67.4 138 35.5
Nitab4.5_0009312g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-09 67.4 76 53.9
Nitab4.5_0000575g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-09 67.0 147 39.5
Nitab4.5_0001544g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-09 66.2 130 40.0
Nitab4.5_0003241g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-09 66.2 39 76.9
Nitab4.5_0003374g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-09 66.2 97 45.4
Nitab4.5_0000500g0250 Nicotiana tabacum HOM05D000024 ORTHO05D285919 3.2e-09 65.9 62 59.7
Nitab4.5_0015200g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.2e-09 65.5 76 50.0
Nitab4.5_0001307g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.1e-09 64.7 160 36.9
Nitab4.5_0001130g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.3e-09 64.3 76 47.4
Nitab4.5_0002591g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.3e-09 64.3 40 75.0
Nitab4.5_0000063g0330 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-08 63.9 87 49.4
Nitab4.5_0003500g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-08 63.2 158 34.8
Nitab4.5_0005123g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.0e-08 61.6 111 44.1
Nitab4.5_0006194g0020 Nicotiana tabacum HOM05D012219 ORTHO05D000007 6.0e-08 61.6 33 81.8
Nitab4.5_0007254g0020 Nicotiana tabacum HOM05D000024 ORTHO05D283683 6.0e-08 61.6 160 33.8
CAN.G529.7 Capsicum annuum HOM05D000024 ORTHO05D000007 1.0e-07 60.8 40 70.0
Nitab4.5_0000082g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-07 60.8 144 35.4
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-07 60.5 129 34.9
Nitab4.5_0002157g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-07 60.5 140 32.9
Nitab4.5_0002590g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-07 60.1 136 33.8
Nitab4.5_0003516g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-07 60.1 128 36.7
Nitab4.5_0006879g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-07 60.1 40 65.0
Nitab4.5_0005810g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-07 59.3 101 39.6
Nitab4.5_0000099g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-07 58.5 40 72.5
Nitab4.5_0001987g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-07 58.5 40 67.5
Nitab4.5_0007204g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-07 58.5 30 90.0
Nitab4.5_0000023g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.7e-07 58.2 113 38.9
Nitab4.5_0000372g0090 Nicotiana tabacum HOM05D014359 ORTHO05D000007 8.7e-07 57.8 49 51.0
Nitab4.5_0011088g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.7e-07 57.8 39 69.2
Nitab4.5_0015860g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000006 8.7e-07 57.8 122 33.6
Nitab4.5_0006435g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-06 57.4 158 34.2
Nitab4.5_0000188g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-06 56.2 39 69.2
Nitab4.5_0000638g0160 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-06 56.2 173 31.2
Nitab4.5_0009471g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-06 56.2 39 69.2
Nitab4.5_0015178g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-06 56.2 121 34.7
Nitab4.5_0001980g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-06 55.8 100 36.0
Nitab4.5_0002909g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-06 55.8 139 33.8
Nitab4.5_0006719g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-06 55.8 33 72.7
Nitab4.5_0000028g0160 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-06 55.1 114 40.4
Nitab4.5_0013531g0010 Nicotiana tabacum HOM05D014359 ORTHO05D000007 9.6e-06 54.3 122 32.8


User provided reference genes

Program Settings