Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 1.5e-119 433.0 232 100.0
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 3.0e-112 408.7 232 94.8
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 2.1e-81 306.2 234 75.2
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 4.4e-79 298.5 236 74.6
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 1.5e-74 283.5 236 72.0
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 3.3e-74 282.3 236 72.5
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 7.3e-74 281.2 236 72.9
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 1.2e-71 273.9 252 68.7
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 7.1e-69 264.6 237 69.2
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 6.6e-59 231.5 236 59.7
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 5.6e-58 228.4 231 62.3
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 3.4e-55 219.2 222 58.6
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 1.9e-53 213.4 235 54.9
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 3.2e-53 212.6 214 62.1
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 4.6e-52 208.8 234 53.8
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 3.9e-51 205.7 254 52.8
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 4.3e-50 202.2 281 49.5
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 3.4e-47 192.6 231 52.4
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 1.3e-46 190.7 233 52.8
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 2.2e-46 189.9 235 51.9
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 1.4e-45 187.2 231 53.2
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 1.9e-45 186.8 231 51.9
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 2.4e-45 186.4 248 50.8
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 9.3e-45 184.5 250 48.8
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 1.6e-44 183.7 229 52.4
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 2.1e-44 183.3 229 52.0
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 3.5e-44 182.6 235 51.1
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 3.5e-44 182.6 213 54.0
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 6.0e-44 181.8 198 54.5
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 3.0e-43 179.5 231 51.9
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 8.1e-41 171.4 228 49.1
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 1.1e-40 171.0 220 53.2
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 1.1e-40 171.0 226 48.2
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 1.4e-40 170.6 218 51.8
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 9.0e-40 167.9 231 48.9
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 1.5e-39 167.2 215 51.6
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 2.0e-39 166.8 248 46.0
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 4.9e-38 162.2 233 48.1
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 6.4e-38 161.8 232 46.6
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 1.4e-37 160.6 279 41.2
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 1.9e-37 160.2 213 48.8
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 3.2e-37 159.5 228 46.5
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 7.1e-37 158.3 232 49.6
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 1.2e-36 157.5 224 46.9
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 2.1e-36 156.8 233 47.6
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 2.7e-36 156.4 233 49.8
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 3.5e-36 156.0 224 47.3
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 7.9e-36 154.8 221 46.2
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 1.0e-35 154.5 241 44.4
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 1.3e-35 154.1 231 47.2
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 1.8e-35 153.7 236 44.5
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 3.0e-35 152.9 242 42.6
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 8.7e-35 151.4 222 46.4
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 1.1e-34 151.0 231 45.9
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 1.9e-34 150.2 189 50.8
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 9.6e-34 147.9 229 45.9
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 9.6e-34 147.9 196 48.0
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 3.7e-33 146.0 160 61.2
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 3.7e-33 146.0 228 44.7
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 3.7e-33 146.0 228 44.7
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 3.7e-33 146.0 242 42.1
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 1.2e-31 141.0 223 43.5
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 3.4e-31 139.4 164 49.4
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 7.6e-31 138.3 239 46.4
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 2.2e-30 136.7 223 42.6
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 6.5e-30 135.2 201 47.8
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 8.4e-30 134.8 201 47.8
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 1.1e-29 134.4 223 42.6
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 1.1e-29 134.4 209 45.5
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.4e-29 134.0 243 41.6
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 2.5e-29 133.3 236 39.8
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 1.2e-28 131.0 180 48.9
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 1.2e-28 131.0 230 41.7
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 1.6e-28 130.6 220 42.7
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 2.1e-28 130.2 229 40.6
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 2.1e-28 130.2 207 44.4
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 6.0e-28 128.6 228 41.2
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 5.1e-27 125.6 226 41.2
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 5.1e-27 125.6 222 39.2
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 5.7e-26 122.1 227 40.1
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 1.6e-25 120.6 204 43.1
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 2.2e-25 120.2 229 39.7
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 3.7e-25 119.4 222 40.5
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 4.8e-25 119.0 235 39.1
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 6.3e-25 118.6 223 40.8
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 1.1e-24 117.9 229 38.9
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 4.5e-23 112.5 220 37.7
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 4.5e-23 112.5 222 41.4
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 4.5e-23 112.5 217 39.6
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 5.9e-23 112.1 220 38.2
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 1.3e-22 110.9 220 39.1
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 1.3e-22 110.9 226 37.2
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 1.3e-22 110.9 220 39.1
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 3.8e-22 109.4 220 38.6
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 5.0e-22 109.0 222 41.4
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 8.5e-22 108.2 221 37.1
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 3.2e-21 106.3 251 35.9
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 9.4e-21 104.8 188 42.6
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 1.2e-20 104.4 150 42.0
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 1.2e-20 104.4 165 39.4
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 1.6e-20 104.0 86 61.6
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 1.6e-20 104.0 226 37.6
Lj6g0004130 Lotus japonicus HOM05D005900 ORTHO05D007306 3.6e-20 102.8 231 39.0
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 7.9e-20 101.7 165 40.6
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 1.0e-19 101.3 224 35.3
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 1.4e-19 100.9 223 39.5
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 8.8e-19 98.2 225 37.8
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 1.5e-18 97.4 223 37.7
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 3.3e-18 96.3 222 39.2
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 5.7e-18 95.5 164 38.4
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 2.2e-17 93.6 221 38.0
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 2.8e-17 93.2 220 34.5
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 6.3e-17 92.0 223 33.6
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 9.1e-16 88.2 94 48.9
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 2.9e-14 83.2 198 36.9
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 6.5e-14 82.0 185 34.1
Atru.chr12.1335 Acer truncatum HOM05D005900 ORTHO05D007306 1.2e-12 77.8 61 57.4
Carub.0008s2548 Capsella rubella HOM05D005900 ORTHO05D007306 6.1e-12 75.5 193 33.7
Sopen01g004270 Solanum pennellii HOM05D005900 ORTHO05D007306 3.3e-10 69.7 107 56.1
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 7.4e-10 68.6 253 31.6
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 3.7e-09 66.2 156 37.2
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 6.3e-09 65.5 156 37.2
Haze_23070 Corylus avellana HOM05D005900 ORTHO05D007306 3.4e-07 59.7 181 37.0
Aqoxy2G04193 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 2.2e-06 57.0 143 37.1


User provided reference genes

Program Settings