Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000191g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.5e-33 145.6 72 100.0
Nitab4.5_0000259g0250 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.6e-19 97.4 56 78.6
Nitab4.5_0001931g0090 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.6e-16 89.0 49 81.6
Nitab4.5_0002367g0180 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.1e-15 86.3 49 79.6
Nitab4.5_0000049g0110 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.4e-15 85.1 49 75.5
Nitab4.5_0009462g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.5e-14 82.4 46 80.4
Nitab4.5_0008055g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.0e-14 82.0 49 75.5
Nitab4.5_0011237g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.6e-14 81.6 49 77.6
PGSC0003DMG400020955 Solanum tuberosum HOM05D000017 ORTHO05D000308 7.7e-14 80.1 49 75.5
PGSC0003DMG400027106 Solanum tuberosum HOM05D000017 ORTHO05D000308 7.7e-14 80.1 49 75.5
Nitab4.5_0000465g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.9e-13 78.2 49 71.4
Nitab4.5_0000829g0080 Nicotiana tabacum HOM05D000017 ORTHO05D000308 7.2e-12 73.6 41 78.0
Nitab4.5_0011837g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.2e-11 72.8 49 65.3
Nitab4.5_0000543g0190 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.6e-11 71.2 48 64.6
Nitab4.5_0003949g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.6e-11 71.2 44 72.7
Nitab4.5_0004770g0100 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.6e-11 71.2 49 59.2
Nitab4.5_0004252g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.6e-11 70.9 45 68.9
Nitab4.5_0006193g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.6e-11 70.9 48 62.5
Nitab4.5_0013483g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.6e-11 70.9 50 58.0
Solyc12g017545.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 6.1e-11 70.5 49 63.3
Sopen10g008780 Solanum pennellii HOM05D000004 ORTHO05D000308 6.1e-11 70.5 49 63.3
Sopen12g010490 Solanum pennellii HOM05D000017 ORTHO05D000013 6.1e-11 70.5 49 63.3
Nitab4.5_0000185g0280 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.8e-10 68.9 48 60.4
Nitab4.5_0000868g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.8e-10 68.9 48 64.6
Nitab4.5_0001004g0100 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.8e-10 68.9 57 56.1
Nitab4.5_0001226g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.8e-10 68.9 38 78.9
Solyc01g059885.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 3.9e-10 67.8 48 60.4
Nitab4.5_0000036g0260 Nicotiana tabacum HOM05D000017 ORTHO05D000308 5.1e-10 67.4 49 61.2
Solyc04g024965.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 5.1e-10 67.4 48 60.4
Sopen12g022700 Solanum pennellii HOM05D000017 ORTHO05D000308 5.1e-10 67.4 48 60.4
PGSC0003DMG400044492 Solanum tuberosum HOM05D000017 ORTHO05D000308 5.1e-10 67.4 49 63.3
Nitab4.5_0000961g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 6.7e-10 67.0 42 71.4
Nitab4.5_0003108g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 6.7e-10 67.0 49 57.1
Nitab4.5_0003471g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 6.7e-10 67.0 49 59.2
Nitab4.5_0000326g0370 Nicotiana tabacum HOM05D000017 ORTHO05D000308 8.8e-10 66.6 44 65.9
Nitab4.5_0003508g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 8.8e-10 66.6 44 68.2
Solyc04g049777.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 8.8e-10 66.6 48 58.3
Sopen03g027220 Solanum pennellii HOM05D000909 ORTHO05D000928 8.8e-10 66.6 49 59.2
Nitab4.5_0001652g0070 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.1e-09 66.2 49 59.2
Sopen01g013160 Solanum pennellii HOM05D000017 ORTHO05D000308 1.1e-09 66.2 48 58.3
Sopen04g011160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-09 66.2 48 58.3
Sopen04g020030 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-09 66.2 48 58.3
Sopen06g023150 Solanum pennellii HOM05D000017 ORTHO05D000308 1.1e-09 66.2 49 59.2
Sopen08g021140 Solanum pennellii HOM05D000017 ORTHO05D000308 1.1e-09 66.2 49 59.2
Nitab4.5_0000605g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.5e-09 65.9 45 64.4
Peaxi162Scf00139g00823 Petunia axillaris HOM05D000017 ORTHO05D000308 1.5e-09 65.9 44 65.9
Nitab4.5_0000842g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.0e-09 65.5 48 58.3
Nitab4.5_0006491g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.0e-09 65.5 44 70.5
Nitab4.5_0004638g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.5e-09 65.1 45 62.2
Nitab4.5_0005009g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.5e-09 65.1 45 60.0
Peaxi162Scf00057g00719 Petunia axillaris HOM05D000017 ORTHO05D000308 2.5e-09 65.1 44 65.9
Solyc03g059123.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 2.5e-09 65.1 48 58.3
Solyc10g075112.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 2.5e-09 65.1 48 58.3
Sopen10g022110 Solanum pennellii HOM05D000017 ORTHO05D000308 2.5e-09 65.1 44 68.2
Nitab4.5_0008994g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.3e-09 64.7 45 64.4
Sopen07g011610 Solanum pennellii HOM05D000017 ORTHO05D000308 3.3e-09 64.7 49 57.1
Sopen02g009630 Solanum pennellii HOM05D000017 ORTHO05D000308 4.3e-09 64.3 40 75.0
Sopen11g025190 Solanum pennellii HOM05D000017 ORTHO05D000308 4.3e-09 64.3 44 68.2
Nitab4.5_0000142g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000308 7.4e-09 63.5 49 59.2
Nitab4.5_0002455g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 7.4e-09 63.5 44 70.5
Nitab4.5_0004416g0080 Nicotiana tabacum HOM05D000017 ORTHO05D000308 7.4e-09 63.5 36 77.8
Peaxi162Scf00048g00042 Petunia axillaris HOM05D000017 ORTHO05D000308 7.4e-09 63.5 47 63.8
Nitab4.5_0000116g0250 Nicotiana tabacum HOM05D000017 ORTHO05D000308 9.7e-09 63.2 48 58.3
Nitab4.5_0000385g0160 Nicotiana tabacum HOM05D000017 ORTHO05D000308 9.7e-09 63.2 44 59.1
Nitab4.5_0003686g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 9.7e-09 63.2 49 55.1
Nitab4.5_0003743g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 9.7e-09 63.2 49 55.1
Nitab4.5_0004234g0140 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.3e-08 62.8 45 62.2
Nitab4.5_0000920g0090 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.7e-08 62.4 45 64.4
Nitab4.5_0001476g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.7e-08 62.4 39 71.8
Nitab4.5_0006676g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.7e-08 62.4 48 56.2
Nitab4.5_0009424g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.7e-08 62.4 44 68.2
Nitab4.5_0000030g0590 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.2e-08 62.0 44 63.6
Nitab4.5_0000529g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000013 2.2e-08 62.0 45 57.8
Nitab4.5_0001227g0090 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.2e-08 62.0 45 60.0
Nitab4.5_0001479g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.2e-08 62.0 41 63.4
Nitab4.5_0001923g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.8e-08 61.6 44 63.6
Solyc01g016412.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 2.8e-08 61.6 41 61.0
Solyc03g079915.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 2.8e-08 61.6 46 58.7
Nitab4.5_0000907g0070 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.7e-08 61.2 45 60.0
Nitab4.5_0012872g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.7e-08 61.2 36 75.0
Nitab4.5_0000125g0410 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.8e-08 60.8 38 71.1
Nitab4.5_0002337g0150 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.8e-08 60.8 49 53.1
Nitab4.5_0000125g0170 Nicotiana tabacum HOM05D000017 ORTHO05D000308 6.3e-08 60.5 44 59.1
Nitab4.5_0000269g0230 Nicotiana tabacum HOM05D000017 ORTHO05D000308 6.3e-08 60.5 44 56.8
Nitab4.5_0002862g0080 Nicotiana tabacum HOM05D000017 ORTHO05D000308 6.3e-08 60.5 45 60.0
Nitab4.5_0003769g0070 Nicotiana tabacum HOM05D000017 ORTHO05D000308 6.3e-08 60.5 50 52.0
Nitab4.5_0001003g0230 Nicotiana tabacum HOM05D000017 ORTHO05D000308 8.2e-08 60.1 48 56.2
Nitab4.5_0002898g0110 Nicotiana tabacum HOM05D000017 ORTHO05D000308 8.2e-08 60.1 49 55.1
Nitab4.5_0000154g0220 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.1e-07 59.7 43 62.8
Nitab4.5_0004720g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.1e-07 59.7 49 57.1
Nitab4.5_0000319g0300 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.4e-07 59.3 44 54.5
Nitab4.5_0001435g0090 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.4e-07 59.3 45 57.8
Nitab4.5_0004193g0090 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.4e-07 59.3 49 59.2
Nitab4.5_0005097g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.4e-07 59.3 49 55.1
Nitab4.5_0006221g0060 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.4e-07 59.3 46 60.9
Nitab4.5_0000233g0280 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.8e-07 58.9 45 62.2
Nitab4.5_0000308g0110 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.4e-07 58.5 46 58.7
Nitab4.5_0001575g0070 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.4e-07 58.5 49 59.2
Nitab4.5_0003159g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.4e-07 58.5 38 60.5
Peaxi162Scf00066g01812 Petunia axillaris HOM05D000017 ORTHO05D000308 2.4e-07 58.5 48 58.3
Nitab4.5_0000066g0240 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.1e-07 58.2 47 55.3
Nitab4.5_0000991g0150 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.1e-07 58.2 36 72.2
Nitab4.5_0001168g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 3.1e-07 58.2 49 51.0
Nitab4.5_0000006g0210 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.1e-07 57.8 40 60.0
Nitab4.5_0000970g0070 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.1e-07 57.8 38 60.5
Nitab4.5_0002484g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 4.1e-07 57.8 44 52.3
Peaxi162Scf00677g00330 Petunia axillaris HOM05D000017 ORTHO05D000308 4.1e-07 57.8 35 71.4
PGR031G3656 Punica granatum HOM05D000017 ORTHO05D000013 4.1e-07 57.8 45 57.8
PGR067G0001 Punica granatum HOM05D000017 ORTHO05D000013 4.1e-07 57.8 45 57.8
CAN.G64.31 Capsicum annuum HOM05D000017 ORTHO05D000308 5.3e-07 57.4 49 49.0
Nitab4.5_0000125g0230 Nicotiana tabacum HOM05D000017 ORTHO05D000308 5.3e-07 57.4 49 51.0
Nitab4.5_0000472g0350 Nicotiana tabacum HOM05D000017 ORTHO05D000308 5.3e-07 57.4 49 51.0
Nitab4.5_0000833g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 6.9e-07 57.0 49 51.0
Nitab4.5_0000913g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000308 6.9e-07 57.0 44 56.8
Nitab4.5_0002948g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000308 6.9e-07 57.0 38 65.8
Nitab4.5_0001180g0200 Nicotiana tabacum HOM05D000017 ORTHO05D000308 9.1e-07 56.6 36 63.9
Solyc01g020372.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 9.1e-07 56.6 36 63.9
Dinv03203 Davidia involucrata HOM05D007604 ORTHO05D008966 1.2e-06 56.2 48 54.2
Hma1.2p1_0309F.1_g120570 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-06 56.2 45 55.6
Hma1.2p1_1572F.1_g291350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-06 56.2 45 55.6
Nitab4.5_0000154g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.2e-06 56.2 46 47.8
Nitab4.5_0000890g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.2e-06 56.2 35 65.7
Nitab4.5_0009599g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.2e-06 56.2 44 54.5
Nitab4.5_0000086g0090 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.5e-06 55.8 38 65.8
Nitab4.5_0000585g0180 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.5e-06 55.8 44 59.1
Nitab4.5_0014124g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 1.5e-06 55.8 36 69.4
Nitab4.5_0002818g0100 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.0e-06 55.5 35 68.6
Nitab4.5_0005463g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.0e-06 55.5 36 69.4
Peaxi162Scf00009g02526 Petunia axillaris HOM05D000017 ORTHO05D000308 2.0e-06 55.5 35 71.4
CSS0012263 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.6e-06 55.1 49 53.1
CSS0039812 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.6e-06 55.1 49 53.1
Nitab4.5_0016404g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.6e-06 55.1 49 49.0
Hma1.2p1_1076F.1_g254590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.4e-06 54.7 45 53.3
Peaxi162Scf00255g00321 Petunia axillaris HOM05D000017 ORTHO05D000308 3.4e-06 54.7 44 56.8
Sopen12g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 4.5e-06 54.3 49 49.0
Nitab4.5_0000183g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000308 5.9e-06 53.9 55 49.1
Nitab4.5_0000320g0180 Nicotiana tabacum HOM05D000017 ORTHO05D000308 5.9e-06 53.9 49 44.9
Nitab4.5_0008055g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000308 5.9e-06 53.9 42 57.1
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 5.9e-06 53.9 49 49.0
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 5.9e-06 53.9 49 49.0
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 5.9e-06 53.9 49 49.0
Sopen09g011090 Solanum pennellii HOM05D000017 ORTHO05D009561 5.9e-06 53.9 49 49.0
Sopen10g013120 Solanum pennellii HOM05D000017 ORTHO05D000013 5.9e-06 53.9 49 49.0
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 5.9e-06 53.9 49 49.0
Nitab4.5_0005970g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000013 7.7e-06 53.5 42 57.1
Solyc01g020526.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 7.7e-06 53.5 36 58.3
Sopen08g005490 Solanum pennellii HOM05D000017 ORTHO05D000013 7.7e-06 53.5 49 49.0
Sopen10g017570 Solanum pennellii HOM05D000017 ORTHO05D009561 7.7e-06 53.5 49 49.0


User provided reference genes

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