Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000190g0180 Nicotiana tabacum HOM05D004656 ORTHO05D005404 0.0e+00 1687.5 846 100.0
Nitab4.5_0003574g0090 Nicotiana tabacum HOM05D004656 ORTHO05D005404 0.0e+00 1414.4 827 88.6
Solyc02g079050.3 Solanum lycopersicum HOM05D004656 ORTHO05D005404 0.0e+00 1384.0 830 85.4
Sopen02g023860 Solanum pennellii HOM05D004656 ORTHO05D005404 0.0e+00 1382.5 830 85.2
CAN.G1181.24 Capsicum annuum HOM05D004656 ORTHO05D005404 0.0e+00 1362.8 833 84.6
Peaxi162Scf00588g01013 Petunia axillaris HOM05D004656 ORTHO05D005404 0.0e+00 1326.2 830 82.9
Dinv39815 Davidia involucrata HOM05D004656 ORTHO05D005404 0.0e+00 1127.5 837 68.9
QL05p081970 Quercus lobata HOM05D004656 ORTHO05D005404 0.0e+00 1093.2 836 66.7
QL03p053091 Quercus lobata HOM05D004656 ORTHO05D005404 0.0e+00 1092.0 836 66.6
GSVIVG01003206001 Vitis vinifera HOM05D004656 ORTHO05D005404 0.0e+00 1078.9 836 66.0
Thecc.06G198700 Theobroma cacao HOM05D004656 ORTHO05D005404 5.8e-312 1073.9 837 65.6
Atru.chr10.2003 Acer truncatum HOM05D004656 ORTHO05D005404 5.2e-311 1070.8 837 66.1
Prupe.4G036500 Prunus persica HOM05D004656 ORTHO05D005404 2.4e-308 1062.0 838 65.8
RcHm_v2.0_Chr5g0006531 Rosa chinensis HOM05D004656 ORTHO05D005404 4.1e-308 1061.2 839 65.3
MD10G1303000 Malus domestica HOM05D004656 ORTHO05D005404 9.1e-308 1060.1 839 65.0
TWI38G2153 Tripterygium wilfordii HOM05D004656 ORTHO05D005404 1.2e-307 1059.7 835 65.4
COL.COLO4_31575 Corchorus olitorius HOM05D004656 ORTHO05D005404 4.5e-307 1057.7 835 65.4
CiPaw.09G158300 Carya illinoinensis HOM05D004656 ORTHO05D005404 5.0e-306 1054.3 837 64.8
Gorai.011G022700 Gossypium raimondii HOM05D004656 ORTHO05D005404 5.0e-306 1054.3 835 64.9
Duzib160G0757 Durio zibethinus HOM05D004656 ORTHO05D005404 4.2e-305 1051.2 855 64.6
DCAR_004136 Daucus carota HOM05D004656 ORTHO05D005404 1.6e-304 1049.3 838 63.7
Gohir.D10G021600 Gossypium hirsutum HOM05D004656 ORTHO05D005404 6.1e-304 1047.3 845 64.4
Cc02_g12490 Coffea canephora HOM05D004656 ORTHO05D005404 8.0e-304 1047.0 835 64.9
Gohir.A10G020800 Gossypium hirsutum HOM05D004656 ORTHO05D005404 8.0e-304 1047.0 832 65.0
Potri.004G034900 Populus trichocarpa HOM05D004656 ORTHO05D005404 5.2e-303 1044.3 836 64.0
FvH4_3g04050 Fragaria vesca HOM05D004656 ORTHO05D005404 2.6e-302 1042.0 838 63.7
FAN11G0019 Fragaria x ananassa HOM05D004656 ORTHO05D005404 2.2e-301 1038.9 842 63.4
Migut.E00415 Erythranthe guttata HOM05D004656 ORTHO05D005404 2.0e-299 1032.3 839 64.7
vmacro03819 Vaccinium macrocarpon HOM05D004656 ORTHO05D005404 2.0e-299 1032.3 928 60.0
Sed0019970 Sechium edule HOM05D004656 ORTHO05D005404 1.0e-298 1030.0 837 62.7
Lalb_Chr05g0218181 Lupinus albus HOM05D004656 ORTHO05D005404 2.3e-298 1028.9 840 63.3
Lj4g0008048 Lotus japonicus HOM05D004656 ORTHO05D005404 8.6e-298 1026.9 840 63.5
Cpa.g.sc27.117 Carica papaya HOM05D004656 ORTHO05D005404 7.2e-297 1023.8 828 64.3
Ciclev10014364m.g Citrus clementina HOM05D004656 ORTHO05D005404 1.2e-296 1023.1 834 63.9
Glyma.07G190600 Glycine max HOM05D004656 ORTHO05D005404 4.7e-296 1021.1 841 62.9
CANSAT56G3558 Cannabis sativa HOM05D004656 ORTHO05D005404 1.0e-295 1020.0 837 63.0
FAN25G3623 Fragaria x ananassa HOM05D004656 ORTHO05D005404 1.4e-295 1019.6 880 61.1
CSS0039613 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 1.8e-295 1019.2 834 64.1
TPR.G32417 Trifolium pratense HOM05D004656 ORTHO05D005404 2.6e-294 1015.4 852 61.6
Medtr4g090990 Medicago truncatula HOM05D004656 ORTHO05D005404 3.4e-294 1015.0 838 62.4
FAN16G1451 Fragaria x ananassa HOM05D004656 ORTHO05D005404 4.4e-294 1014.6 836 63.0
Nn2g12691 Nelumbo nucifera HOM05D004656 ORTHO05D005404 8.3e-293 1010.4 837 62.2
PSO063G3544 Papaver somniferum HOM05D004656 ORTHO05D005404 3.2e-292 1008.4 840 62.3
Cfa000358 Carpinus fangiana HOM05D004656 ORTHO05D005404 2.7e-291 1005.4 836 62.2
Psat7g109640 Pisum sativum HOM05D004656 ORTHO05D005404 4.6e-291 1004.6 835 61.8
arahy.Tifrunner.gnm1.ann1.N579TE Arachis hypogaea HOM05D004656 ORTHO05D005404 1.0e-290 1003.4 841 61.5
Aqoxy7G03085 Aquilegia oxysepala HOM05D004656 ORTHO05D005404 2.3e-290 1002.3 839 62.7
SalBow7G0840 Salvia bowleyana HOM05D004656 ORTHO05D005404 1.1e-289 1000.0 838 63.0
SalBow7G0885 Salvia bowleyana HOM05D004656 ORTHO05D005404 3.3e-289 998.4 838 63.0
arahy.Tifrunner.gnm1.ann1.9GFP5H Arachis hypogaea HOM05D004656 ORTHO05D005404 1.8e-287 992.6 866 59.7
Lsat_1_v5_gn_4_57080 Lactuca sativa HOM05D004656 ORTHO05D005404 1.2e-286 989.9 838 62.5
HanXRQChr17g0551051 Helianthus annuus HOM05D004656 ORTHO05D005404 2.9e-285 985.3 838 61.7
ECA234G0402 Erigeron canadensis HOM05D004656 ORTHO05D005404 2.0e-283 979.2 840 62.1
Phvul.002G222500 Phaseolus vulgaris HOM05D004656 ORTHO05D005404 3.0e-282 975.3 838 60.7
PSO782G2217 Papaver somniferum HOM05D004656 ORTHO05D005404 1.9e-281 972.6 840 60.6
Sabra04G0020600 Salix brachista HOM05D004656 ORTHO05D005404 1.9e-281 972.6 807 62.1
Oeu053939.3 Olea europaea HOM05D004656 ORTHO05D005404 4.3e-281 971.5 834 62.4
THA.LOC104812734 Tarenaya hassleriana HOM05D004656 ORTHO05D005404 9.5e-281 970.3 831 60.2
VMungo0251G3002 Vigna mungo HOM05D004656 ORTHO05D005404 2.3e-279 965.7 841 60.3
ClCG01G022700 Citrullus lanatus HOM05D004656 ORTHO05D005404 3.1e-279 965.3 837 60.3
Aa31LG6G3550 Aethionema arabicum HOM05D004656 ORTHO05D005404 1.3e-277 959.9 838 59.1
Thhalv10024471m.g Eutrema salsugineum HOM05D004656 ORTHO05D005404 1.9e-276 956.1 834 59.0
BraA01t01228Z Brassica rapa HOM05D004656 ORTHO05D005404 2.4e-276 955.7 841 58.5
AT4G21530 Arabidopsis thaliana HOM05D004656 ORTHO05D005404 4.1e-276 954.9 841 58.6
MELO3C025319.2 Cucumis melo HOM05D004656 ORTHO05D005404 1.2e-275 953.4 838 59.4
A01p12840 Brassica napus HOM05D004656 ORTHO05D005404 2.1e-275 952.6 836 58.5
CsaV3_1G030810 Cucumis sativus L. HOM05D004656 ORTHO05D005404 2.7e-275 952.2 837 59.5
AL7G32500 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 7.8e-275 950.7 841 58.6
Carub.0007s1989 Capsella rubella HOM05D004656 ORTHO05D005404 7.8e-275 950.7 837 58.3
BolC1t01500H Brassica oleracea HOM05D004656 ORTHO05D005404 1.3e-274 949.9 836 58.5
C01p15460 Brassica napus HOM05D004656 ORTHO05D005404 3.9e-274 948.3 845 57.9
MBI16_g41806_MAGBIO Magnolia biondii HOM05D004656 ORTHO05D005404 5.1e-274 948.0 939 55.2
CARHR228190 Cardamine hirsuta HOM05D004656 ORTHO05D005404 1.2e-272 943.3 837 57.8
PGR042G3654 Punica granatum HOM05D004656 ORTHO05D005404 1.2e-272 943.3 848 59.0
Sp7g19640 Schrenkiella parvula HOM05D004656 ORTHO05D005404 1.5e-270 936.4 836 57.5
Sc17g0006590 Simmondsia chinensis HOM05D004656 ORTHO05D005404 1.7e-269 932.9 842 58.1
BcaNung02789 Brassica carinata HOM05D004656 ORTHO05D005404 1.9e-265 919.5 857 56.5
AUR62016904 Chenopodium quinoa HOM05D004656 ORTHO05D005404 4.4e-262 908.3 836 56.7
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 5.8e-262 907.9 844 58.2
Lj2A281G21 Lonicera japonica HOM05D004656 ORTHO05D005404 1.2e-259 900.2 830 58.6
Haze_06568 Corylus avellana HOM05D004656 ORTHO05D005404 1.6e-256 889.8 779 60.2
Manes.15G100000 Manihot esculenta HOM05D004656 ORTHO05D005404 1.3e-253 880.2 800 58.6
AUR62014723 Chenopodium quinoa HOM05D004656 ORTHO05D005404 3.3e-249 865.5 805 55.7
ATR0580G317 Amborella trichopoda HOM05D004656 ORTHO05D005404 5.1e-242 841.6 842 54.3
HPP92_015366 Vanilla planifolia HOM05D004656 ORTHO05D005404 7.4e-241 837.8 855 52.7
EL10Ac8g20612 Beta vulgaris HOM05D004656 ORTHO05D005404 6.0e-235 818.1 827 53.4
Zm00001eb192820 Zea mays HOM05D004656 ORTHO05D005404 1.7e-208 730.3 828 48.6
GSVIVG01003202001 Vitis vinifera HOM05D004656 ORTHO05D005404 8.2e-208 728.0 548 68.6
BcaNung02790 Brassica carinata HOM05D004656 ORTHO05D005404 3.3e-201 706.1 497 70.4
Ca_18486_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 7.0e-191 671.8 597 59.3
TAR626G0166 Trochodendron aralioides HOM05D004656 ORTHO05D005404 1.5e-188 664.1 479 71.0
CDE02G2476 Ceratophyllum demersum HOM05D004656 ORTHO05D005404 4.6e-174 615.9 828 45.0
Eucgr.E03497 Eucalyptus grandis HOM05D004656 ORTHO05D005404 5.6e-172 609.0 429 69.7
AL7G32520 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 4.6e-166 589.3 636 51.4
Pp3c19_17530 Physcomitrium patens HOM05D004656 ORTHO05D005404 8.9e-154 548.5 857 39.1
Mapoly0038s0098 Marchantia polymorpha HOM05D004656 ORTHO05D005404 5.1e-149 532.7 851 39.5
Eucgr.D02667 Eucalyptus grandis HOM05D004656 ORTHO05D005404 7.8e-142 508.8 400 65.0
unitig_8.g3352 Utricularia gibba HOM05D004656 ORTHO05D005404 2.3e-141 507.3 572 50.9
Hma1.2p1_1241F.1_g269840 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 1.1e-127 461.8 565 49.7
AagrBONN_evm.TU.Sc2ySwM_117.1500 Anthoceros agrestis HOM05D004656 ORTHO05D005404 1.0e-109 402.1 800 33.0
CBR_g50890 Chara braunii HOM05D004656 ORTHO05D000048 3.7e-107 393.7 773 32.9
BcaC09g51334 Brassica carinata HOM05D004656 ORTHO05D005404 1.1e-100 372.1 440 50.5
BcaC09g51339 Brassica carinata HOM05D004656 ORTHO05D005404 2.6e-97 360.9 445 47.9
Eucgr.E03552 Eucalyptus grandis HOM05D004656 ORTHO05D005404 6.7e-85 319.7 259 64.1
Ca_18485_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 1.3e-83 315.5 190 74.2
Hund23621 Selenicereus undatus HOM05D004656 ORTHO05D005404 2.2e-83 314.7 437 41.9
BcaC09g51337 Brassica carinata HOM05D004656 ORTHO05D005404 4.8e-83 313.5 378 47.9
Eucgr.C00026 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.7e-72 278.5 210 66.2
unitig_8.g3351 Utricularia gibba HOM05D004656 ORTHO05D005404 2.9e-72 277.7 227 60.4
SEGI_33901 Sequoiadendron giganteum HOM05D004656 ORTHO05D005404 2.7e-65 254.6 448 35.3
arahy.Tifrunner.gnm1.ann1.QWV34J Arachis hypogaea HOM05D004656 ORTHO05D005404 1.0e-64 252.7 326 45.7
SMO119G0264 Selaginella moellendorffii HOM05D004656 ORTHO05D005404 3.6e-54 217.6 425 33.9
QL02p031126 Quercus lobata HOM05D004656 ORTHO05D005404 2.4e-42 178.3 184 57.1
SHI02118 Sapria himalayana HOM05D004656 ORTHO05D005404 1.8e-37 162.2 224 41.1
PRCOL_00000091 Prasinoderma coloniale HOM05D004656 ORTHO05D005404 4.9e-35 154.1 486 25.7
SEGI_08767 Sequoiadendron giganteum HOM05D004656 ORTHO05D005404 8.4e-35 153.3 162 53.1
RcHm_v2.0_Chr5g0006431 Rosa chinensis HOM05D004656 ORTHO05D005404 5.4e-34 150.6 380 30.3
MCO05G135 Micromonas commoda HOM05D004656 ORTHO05D005404 7.8e-33 146.7 505 23.4
Os02g0785900 Oryza sativa ssp. japonica HOM05D004656 ORTHO05D005404 1.5e-31 142.5 103 64.1
CSS0025603 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 1.2e-30 139.4 83 77.1
Cre12.g556650 Chlamydomonas reinhardtii HOM05D004656 ORTHO05D005404 1.6e-30 139.0 509 24.4
CSS0042439 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 1.4e-29 136.0 83 77.1
TAR369G0180 Trochodendron aralioides HOM05D004656 ORTHO05D005404 4.0e-29 134.4 71 83.1
EL10Ac6g14063 Beta vulgaris HOM05D004656 ORTHO05D005404 9.0e-29 133.3 90 74.4
Hund23620 Selenicereus undatus HOM05D004656 ORTHO05D005404 9.0e-29 133.3 86 72.1
EL10Ac9g22460 Beta vulgaris HOM05D004656 ORTHO05D005404 2.0e-28 132.1 138 54.3
CSS0038861 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.2e-27 128.6 83 73.5
CSS0005991 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.7e-25 121.7 106 54.7
CSS0002071 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 3.5e-25 121.3 78 71.8
Hma1.2p1_0144F.1_g064710 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 4.6e-25 120.9 61 88.5
Eucgr.E01958 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.9e-24 117.9 92 60.9
Eucgr.C00045 Eucalyptus grandis HOM05D004656 ORTHO05D005404 6.6e-24 117.1 83 68.7
SHI02121 Sapria himalayana HOM05D004656 ORTHO05D005404 6.6e-24 117.1 287 32.4
Zm00001eb125490 Zea mays HOM05D004656 ORTHO05D005404 1.5e-23 115.9 109 50.5
SGA_v2.0_scaffold159G37668 Striga asiatica HOM05D004656 ORTHO05D005404 3.3e-23 114.8 346 32.1
Haze_06207 Corylus avellana HOM05D004656 ORTHO05D005404 7.3e-23 113.6 61 82.0
Zm00001eb384090 Zea mays HOM05D004656 ORTHO05D005404 2.8e-22 111.7 109 49.5
Zm00001eb374130 Zea mays HOM05D004656 ORTHO05D005404 3.1e-21 108.2 61 80.3
Hma1.2p1_1241F.1_g269830 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 3.8e-19 101.3 61 77.0
MELO3C008912.2 Cucumis melo HOM05D004656 ORTHO05D005404 2.7e-17 95.1 55 76.4
EL10Ac3g05965 Beta vulgaris HOM05D004656 ORTHO05D005404 7.9e-17 93.6 57 78.9
CSS0037848 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 2.3e-16 92.0 82 59.8
CSS0033314 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 3.9e-16 91.3 55 78.2
SHI02114 Sapria himalayana HOM05D004656 ORTHO05D005404 3.9e-16 91.3 103 47.6
MELO3C032683.2 Cucumis melo HOM05D004656 ORTHO05D005404 6.7e-16 90.5 54 72.2
CSS0023832 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.8e-14 85.1 83 55.4
Eucgr.C00011 Eucalyptus grandis HOM05D004656 ORTHO05D005404 8.1e-14 83.6 79 57.0
Eucgr.E03560 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.4e-13 82.8 69 60.9
Eucgr.L00388 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.0e-12 79.0 60 61.7
Eucgr.E03557 Eucalyptus grandis HOM05D004656 ORTHO05D005404 7.6e-12 77.0 60 58.3
Zm00001eb266270 Zea mays HOM05D004656 ORTHO05D005404 7.1e-10 70.5 80 45.0
SHI02119 Sapria himalayana HOM05D004656 ORTHO05D005404 1.1e-07 63.2 46 69.6
Actinidia29288 Actinidia chinensis HOM05D004656 ORTHO05D005404 3.3e-07 61.6 31 87.1
CSS0036547 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 7.4e-07 60.5 83 43.4


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