Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.9e-140 502.7 290 100.0
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 7.9e-118 427.6 296 86.1
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 5.7e-68 261.9 269 68.0
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 2.1e-62 243.4 271 58.7
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 2.8e-62 243.0 273 61.2
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 1.6e-46 190.7 265 52.1
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.2e-38 164.5 272 44.1
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 8.1e-38 161.8 274 42.0
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 1.3e-35 154.5 282 42.6
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 4.1e-34 149.4 269 43.1
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 9.2e-34 148.3 273 41.0
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.2e-33 147.9 273 43.6
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 3.5e-33 146.4 267 41.2
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 1.0e-32 144.8 270 40.0
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 1.7e-32 144.1 295 39.0
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 3.9e-32 142.9 279 40.5
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 5.6e-31 139.0 267 41.9
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.2e-30 137.9 122 64.8
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 1.2e-30 137.9 284 39.1
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 1.2e-30 137.9 264 40.2
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 2.8e-30 136.7 288 38.2
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 2.8e-30 136.7 307 36.8
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 1.8e-29 134.0 267 38.6
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.8e-29 134.0 268 38.8
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 3.1e-29 133.3 286 38.1
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 3.1e-29 133.3 274 39.4
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 5.2e-29 132.5 297 37.7
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 6.8e-29 132.1 265 37.7
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 1.5e-28 131.0 275 37.1
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.0e-28 130.6 286 37.8
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 2.6e-28 130.2 286 40.2
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 7.6e-28 128.6 275 38.9
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 7.6e-28 128.6 115 59.1
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 2.2e-27 127.1 263 37.6
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 2.9e-27 126.7 283 37.5
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 2.9e-27 126.7 246 38.6
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 4.9e-27 125.9 278 37.4
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 4.9e-27 125.9 279 38.4
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 6.4e-27 125.6 281 39.5
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 6.4e-27 125.6 131 54.2
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 6.4e-27 125.6 270 37.4
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 8.4e-27 125.2 282 38.7
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 8.4e-27 125.2 268 38.8
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 1.1e-26 124.8 269 39.4
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 1.9e-26 124.0 274 38.7
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 1.9e-26 124.0 275 37.5
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.9e-26 124.0 275 37.5
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 3.2e-26 123.2 269 37.9
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 4.1e-26 122.9 265 37.4
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 4.1e-26 122.9 116 57.8
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 7.1e-26 122.1 122 57.4
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 1.2e-25 121.3 280 38.6
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 1.2e-25 121.3 290 35.2
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 2.1e-25 120.6 266 37.2
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 2.1e-25 120.6 283 36.0
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 3.5e-25 119.8 283 37.1
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 6.0e-25 119.0 285 37.9
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 6.0e-25 119.0 297 35.4
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 7.8e-25 118.6 272 37.1
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.0e-24 118.2 266 36.8
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 1.3e-24 117.9 309 34.6
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 1.7e-24 117.5 268 37.3
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 6.6e-24 115.5 279 36.2
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 8.6e-24 115.2 341 32.6
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 2.5e-23 113.6 117 59.8
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 5.6e-23 112.5 313 32.9
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 7.3e-23 112.1 278 42.4
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 7.3e-23 112.1 278 42.4
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 7.3e-23 112.1 285 35.8
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.2e-22 111.3 265 37.7
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 1.6e-22 110.9 279 35.8
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 1.6e-22 110.9 268 38.8
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 3.6e-22 109.8 120 54.2
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 4.7e-22 109.4 273 35.2
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 1.4e-21 107.8 264 38.3
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 4.0e-21 106.3 291 35.1
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 8.9e-21 105.1 281 35.2
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 1.5e-20 104.4 281 34.2
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 4.4e-20 102.8 232 34.5
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 5.8e-20 102.4 114 55.3
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 7.6e-20 102.1 133 46.6
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 9.9e-20 101.7 114 54.4
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 9.9e-20 101.7 119 51.3
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 1.3e-19 101.3 277 32.9
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 4.9e-19 99.4 286 33.9
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 8.4e-19 98.6 268 36.2
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 1.1e-18 98.2 295 32.9
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 1.4e-18 97.8 122 50.0
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.9e-18 97.4 268 36.2
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 1.9e-18 97.4 270 33.7
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.2e-18 96.7 268 35.8
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 5.4e-18 95.9 289 31.8
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 9.3e-18 95.1 116 52.6
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 1.6e-17 94.4 282 34.4
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 1.3e-16 91.3 284 32.7
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 1.3e-16 91.3 292 32.2
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 2.3e-16 90.5 271 34.3
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 3.0e-16 90.1 271 34.3
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 3.0e-16 90.1 79 60.8
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 5.1e-16 89.4 275 32.7
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.9e-15 87.4 123 48.0
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 7.3e-15 85.5 288 33.3
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.6e-14 84.3 114 50.0
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 2.1e-14 84.0 285 35.1
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.8e-14 83.6 116 50.9
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.8e-14 83.6 116 50.9
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 6.2e-14 82.4 130 43.1
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 8.1e-14 82.0 280 30.7
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 1.8e-13 80.9 280 30.4
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 3.1e-13 80.1 314 29.9
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 6.9e-13 79.0 307 30.6
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 9.0e-13 78.6 283 29.7
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 2.6e-12 77.0 114 50.9
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 4.5e-12 76.3 266 32.0
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 1.2e-09 68.2 124 42.7
Oeu001396.1 Olea europaea HOM05D045950 ORTHO05D007888 3.5e-09 66.6 63 55.6
Oeu001394.1 Olea europaea HOM05D045950 ORTHO05D007888 7.9e-09 65.5 63 55.6
Nitab4.5_0001007g0050 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.8e-08 64.3 234 42.3
Oeu021600.1 Olea europaea HOM05D006486 ORTHO05D007888 1.6e-06 57.8 72 48.6
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 4.8e-06 56.2 136 36.0


User provided reference genes

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