Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000185g0070 Nicotiana tabacum HOM05D000101 ORTHO05D000089 4.3e-107 391.3 198 100.0
Peaxi162Scf00102g00936 Petunia axillaris HOM05D000101 ORTHO05D000089 1.1e-54 217.2 206 54.9
Nitab4.5_0000185g0090 Nicotiana tabacum HOM05D000101 ORTHO05D000089 3.3e-51 205.7 216 52.3
CAN.G1227.23 Capsicum annuum HOM05D000101 ORTHO05D000089 4.5e-48 195.3 242 45.9
Nitab4.5_0005412g0010 Nicotiana tabacum HOM05D000101 ORTHO05D000089 1.0e-47 194.1 216 50.0
PGSC0003DMG400012471 Solanum tuberosum HOM05D000101 ORTHO05D000089 2.2e-47 193.0 256 43.0
Nitab4.5_0000185g0080 Nicotiana tabacum HOM05D000101 ORTHO05D000089 2.9e-47 192.6 218 51.4
Nitab4.5_0003152g0120 Nicotiana tabacum HOM05D000101 ORTHO05D000089 6.5e-47 191.4 243 44.4
CAN.G845.14 Capsicum annuum HOM05D000101 ORTHO05D000089 7.2e-46 188.0 245 42.9
PGSC0003DMG400002275 Solanum tuberosum HOM05D000092 ORTHO05D000089 1.6e-45 186.8 258 41.5
PGSC0003DMG400012466 Solanum tuberosum HOM05D000101 ORTHO05D000089 2.1e-45 186.4 243 43.2
PGSC0003DMG400012472 Solanum tuberosum HOM05D000101 ORTHO05D000089 4.6e-45 185.3 257 43.2
CAN.G2.66 Capsicum annuum HOM05D000101 ORTHO05D000089 6.1e-45 184.9 243 43.6
PGSC0003DMG400019083 Solanum tuberosum HOM05D000101 ORTHO05D000089 3.9e-44 182.2 259 42.5
Nitab4.5_0002683g0040 Nicotiana tabacum HOM05D000101 ORTHO05D000089 4.3e-43 178.7 149 58.4
CAN.G137.49 Capsicum annuum HOM05D000101 ORTHO05D000089 9.7e-43 177.6 245 42.0
Nitab4.5_0005412g0020 Nicotiana tabacum HOM05D000101 ORTHO05D000089 1.8e-41 173.3 243 42.0
CAN.G845.7 Capsicum annuum HOM05D000101 ORTHO05D000089 2.0e-40 169.9 142 57.7
CAN.G845.5 Capsicum annuum HOM05D000101 ORTHO05D000089 1.0e-39 167.5 194 46.9
Nitab4.5_0002683g0080 Nicotiana tabacum HOM05D000101 ORTHO05D000089 2.9e-39 166.0 149 54.4
Sopen08g004810 Solanum pennellii HOM05D000101 ORTHO05D000089 4.2e-38 162.2 146 54.1
Solyc06g048910.2 Solanum lycopersicum HOM05D000101 ORTHO05D000089 2.1e-37 159.8 243 39.5
Solyc08g013960.1 Solanum lycopersicum HOM05D000101 ORTHO05D012848 6.1e-37 158.3 149 51.7
CAN.G2.59 Capsicum annuum HOM05D000101 ORTHO05D000089 7.9e-37 157.9 136 55.9
Nitab4.5_0006415g0010 Nicotiana tabacum HOM05D000101 ORTHO05D012848 2.3e-36 156.4 151 52.3
CAN.G845.3 Capsicum annuum HOM05D000101 ORTHO05D000089 4.7e-29 132.1 196 39.3
CAN.G845.9 Capsicum annuum HOM05D000092 ORTHO05D000089 8.0e-29 131.3 196 39.3
CAN.G845.4 Capsicum annuum HOM05D000101 ORTHO05D000089 2.3e-28 129.8 197 40.1
CAN.G1646.8 Capsicum annuum HOM05D000101 ORTHO05D000089 3.0e-28 129.4 196 39.8
CAN.G2.60 Capsicum annuum HOM05D000101 ORTHO05D000089 2.0e-27 126.7 200 38.5
CAN.G673.10 Capsicum annuum HOM05D000101 ORTHO05D000089 4.1e-25 119.0 196 38.8
PGSC0003DMG400002276 Solanum tuberosum HOM05D000101 ORTHO05D000089 1.7e-23 113.6 218 39.0
CAN.G845.1 Capsicum annuum HOM05D000101 ORTHO05D000089 2.3e-20 103.2 121 47.1
Sopen08g003220 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-20 103.2 198 33.8
CAN.G561.27 Capsicum annuum HOM05D000101 ORTHO05D000089 4.8e-18 95.5 79 58.2
TAR627G0768 Trochodendron aralioides HOM05D000101 ORTHO05D000089 5.9e-16 88.6 235 26.4
TAR636G0948 Trochodendron aralioides HOM05D000101 ORTHO05D000089 1.0e-15 87.8 236 25.4
Hma1.2p1_2028F.1_g311700 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 7.2e-14 81.6 239 26.8
CAN.G845.13 Capsicum annuum HOM05D000101 ORTHO05D000089 2.7e-13 79.7 155 36.1
PGSC0003DMG400012470 Solanum tuberosum HOM05D000101 ORTHO05D000089 1.0e-12 77.8 155 35.5
Cfa020431 Carpinus fangiana HOM05D000101 ORTHO05D000089 4.0e-12 75.9 235 23.8
TAR626G0387 Trochodendron aralioides HOM05D000092 ORTHO05D000089 8.8e-12 74.7 117 35.9
QL08p013433 Quercus lobata HOM05D000092 ORTHO05D000089 7.5e-11 71.6 237 22.8
Actinidia09962 Actinidia chinensis HOM05D000101 ORTHO05D000089 9.8e-11 71.2 234 25.2
Cfa020427 Carpinus fangiana HOM05D000101 ORTHO05D000089 9.8e-11 71.2 234 22.6
Hma1.2p1_2028F.1_g311690 Hydrangea macrophylla HOM05D000092 ORTHO05D000089 9.8e-11 71.2 236 25.4
QL08p013754 Quercus lobata HOM05D000101 ORTHO05D000089 1.7e-10 70.5 237 24.1
TAR627G0724 Trochodendron aralioides HOM05D000101 ORTHO05D012848 1.7e-10 70.5 128 31.2
Dinv22309 Davidia involucrata HOM05D000101 ORTHO05D000089 2.2e-10 70.1 148 28.4
QL12p007021 Quercus lobata HOM05D000101 ORTHO05D000089 2.2e-10 70.1 237 21.9
CAN.G561.26 Capsicum annuum HOM05D000101 ORTHO05D000089 3.7e-10 69.3 146 33.6
Hma1.2p1_2204F.1_g317110 Hydrangea macrophylla HOM05D000092 ORTHO05D000089 1.1e-09 67.8 236 25.0
QL12p007076 Quercus lobata HOM05D000101 ORTHO05D000089 1.8e-09 67.0 237 21.9
CAN.G285.2 Capsicum annuum HOM05D000101 ORTHO05D000089 2.4e-09 66.6 61 52.5
Cfa020430 Carpinus fangiana HOM05D000101 ORTHO05D000089 2.4e-09 66.6 237 24.5
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 2.4e-09 66.6 240 22.1
MBI18_g12151_MAGBIO Magnolia biondii HOM05D000092 ORTHO05D000089 4.1e-09 65.9 242 24.0
MBI18_g12155_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D012848 4.1e-09 65.9 242 24.0
CiPaw.11G103500 Carya illinoinensis HOM05D000101 ORTHO05D000089 5.4e-09 65.5 235 24.7
Cfa020425 Carpinus fangiana HOM05D000101 ORTHO05D000089 7.0e-09 65.1 235 22.1
QL12p007040 Quercus lobata HOM05D000101 ORTHO05D000089 7.0e-09 65.1 237 21.5
MBI18_g27850_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D012848 1.2e-08 64.3 242 23.6
GSVIVG01037444001 Vitis vinifera HOM05D000101 ORTHO05D000089 1.2e-08 64.3 233 21.0
Cfa020421 Carpinus fangiana HOM05D000101 ORTHO05D000089 1.6e-08 63.9 233 23.2
GSVIVG01014596001 Vitis vinifera HOM05D000101 ORTHO05D000089 2.0e-08 63.5 230 25.7
MBI18_g34322_MAGBIO Magnolia biondii HOM05D000092 ORTHO05D000089 3.5e-08 62.8 220 25.5
CiPaw.01G041900 Carya illinoinensis HOM05D000101 ORTHO05D000089 4.5e-08 62.4 132 27.3
MBI18_g46232_MAGBIO Magnolia biondii HOM05D000092 ORTHO05D000042 7.7e-08 61.6 190 21.1
QL08p013532 Quercus lobata HOM05D000101 ORTHO05D000089 7.7e-08 61.6 239 21.3
QL12p007057 Quercus lobata HOM05D006624 ORTHO05D008209 7.7e-08 61.6 237 21.1
QL08p013743 Quercus lobata HOM05D000101 ORTHO05D000089 1.0e-07 61.2 239 20.9
QL08p013726 Quercus lobata HOM05D000101 ORTHO05D000089 1.7e-07 60.5 238 20.2
BraA03t14782Z Brassica rapa HOM05D000101 ORTHO05D000089 2.9e-07 59.7 231 23.8
CiPaw.01G042400 Carya illinoinensis HOM05D000101 ORTHO05D000089 3.8e-07 59.3 108 30.6
Gohir.A11G280500 Gossypium hirsutum HOM05D000101 ORTHO05D000089 3.8e-07 59.3 228 24.6
CiPaw.12G126200 Carya illinoinensis HOM05D000101 ORTHO05D000089 5.0e-07 58.9 240 23.3
Potri.001G416900 Populus trichocarpa HOM05D000092 ORTHO05D000089 1.5e-06 57.4 239 23.4
PGSC0003DMG400002277 Solanum tuberosum HOM05D000101 ORTHO05D000089 1.5e-06 57.4 137 35.0
Gohir.D11G290800 Gossypium hirsutum HOM05D000092 ORTHO05D000089 1.9e-06 57.0 234 23.5
Gorai.007G314700 Gossypium raimondii HOM05D000101 ORTHO05D000089 1.9e-06 57.0 234 23.5
Sopen06g015230 Solanum pennellii HOM05D000101 ORTHO05D000089 1.9e-06 57.0 58 48.3
QL06p046470 Quercus lobata HOM05D000101 ORTHO05D000089 2.5e-06 56.6 139 23.0
BcaC06g32707 Brassica carinata HOM05D000101 ORTHO05D000089 3.3e-06 56.2 228 21.9
Sed0014100 Sechium edule HOM05D000092 ORTHO05D000042 3.3e-06 56.2 232 22.8
TAR243G0002 Trochodendron aralioides HOM05D000092 ORTHO05D000042 3.3e-06 56.2 133 29.3
Peaxi162Scf01038g00112 Petunia axillaris HOM05D000101 ORTHO05D000089 4.3e-06 55.8 165 29.1
Peaxi162Scf00357g00427 Petunia axillaris HOM05D000092 ORTHO05D000089 5.6e-06 55.5 155 27.7
Nn8g39379 Nelumbo nucifera HOM05D000092 ORTHO05D000089 7.3e-06 55.1 229 24.0
TAR369G0238 Trochodendron aralioides HOM05D001594 ORTHO05D002862 7.3e-06 55.1 126 27.8
QL08p013415 Quercus lobata HOM05D000092 ORTHO05D000089 9.5e-06 54.7 237 19.4


User provided reference genes

Program Settings