Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 6.5e-108 394.0 196 100.0
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 3.3e-67 258.8 192 71.9
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 3.5e-61 238.8 115 98.3
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 7.8e-61 237.7 115 97.4
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 7.8e-61 237.7 115 97.4
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 2.3e-60 236.1 116 95.7
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 2.8e-58 229.2 115 91.3
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 1.1e-57 227.3 116 93.1
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 1.1e-57 227.3 115 91.3
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 1.8e-57 226.5 115 93.0
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 1.8e-57 226.5 115 91.3
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 3.1e-57 225.7 115 90.4
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.1e-57 225.7 115 88.7
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 3.1e-57 225.7 115 91.3
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 4.0e-57 225.3 115 89.6
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 4.0e-57 225.3 115 88.7
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 6.8e-57 224.6 116 90.5
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 6.8e-57 224.6 115 90.4
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 6.8e-57 224.6 115 88.7
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 8.9e-57 224.2 115 90.4
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 1.2e-56 223.8 115 89.6
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 1.2e-56 223.8 115 88.7
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 1.5e-56 223.4 115 90.4
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 1.5e-56 223.4 115 91.3
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 1.5e-56 223.4 115 91.3
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 1.5e-56 223.4 115 89.6
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 2.0e-56 223.0 115 89.6
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 2.0e-56 223.0 115 87.8
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 2.0e-56 223.0 115 89.6
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 2.6e-56 222.6 115 89.6
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 3.4e-56 222.2 115 89.6
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.4e-56 222.2 115 87.0
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 5.8e-56 221.5 115 87.0
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 5.8e-56 221.5 115 89.6
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 5.8e-56 221.5 115 85.2
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 5.8e-56 221.5 115 87.8
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 5.8e-56 221.5 115 85.2
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 7.6e-56 221.1 115 87.0
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 7.6e-56 221.1 115 87.0
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 7.6e-56 221.1 115 86.1
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 7.6e-56 221.1 115 86.1
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 9.9e-56 220.7 113 91.2
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 9.9e-56 220.7 115 87.8
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 1.3e-55 220.3 115 86.1
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.7e-55 219.9 115 85.2
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 1.7e-55 219.9 116 87.9
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.2e-55 219.5 115 85.2
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 2.9e-55 219.2 115 87.0
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 2.9e-55 219.2 115 87.8
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 3.8e-55 218.8 115 87.0
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 3.8e-55 218.8 115 86.1
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 4.9e-55 218.4 115 87.0
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 8.4e-55 217.6 115 87.0
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 1.1e-54 217.2 115 86.1
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 1.4e-54 216.9 115 86.1
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 1.9e-54 216.5 115 87.0
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 3.2e-54 215.7 115 87.0
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 3.2e-54 215.7 114 86.8
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 4.2e-54 215.3 115 87.0
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 5.4e-54 214.9 115 86.1
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 5.4e-54 214.9 115 87.8
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 9.2e-54 214.2 115 86.1
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 9.2e-54 214.2 115 86.1
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 9.2e-54 214.2 115 86.1
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 9.2e-54 214.2 115 86.1
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 9.2e-54 214.2 115 86.1
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 1.2e-53 213.8 115 81.7
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 1.6e-53 213.4 115 85.2
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 2.1e-53 213.0 115 84.3
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 2.1e-53 213.0 115 84.3
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 2.1e-53 213.0 115 81.7
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 2.1e-53 213.0 115 86.1
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 2.7e-53 212.6 115 81.7
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 2.7e-53 212.6 115 83.5
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 3.5e-53 212.2 115 85.2
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 3.5e-53 212.2 115 86.1
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 4.6e-53 211.8 115 84.3
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 4.6e-53 211.8 115 84.3
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 4.6e-53 211.8 115 84.3
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 4.6e-53 211.8 115 84.3
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 4.6e-53 211.8 115 84.3
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 4.6e-53 211.8 115 84.3
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 4.6e-53 211.8 115 86.1
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 4.6e-53 211.8 115 80.9
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 4.6e-53 211.8 115 82.6
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 4.6e-53 211.8 115 84.3
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 6.0e-53 211.5 115 81.7
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 7.8e-53 211.1 127 75.6
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 1.0e-52 210.7 115 84.3
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 1.0e-52 210.7 127 76.4
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.0e-52 210.7 127 75.6
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 1.3e-52 210.3 115 80.9
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 1.3e-52 210.3 127 75.6
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 1.3e-52 210.3 115 85.2
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 1.3e-52 210.3 115 83.5
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 3.9e-52 208.8 115 83.5
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 3.9e-52 208.8 115 83.5
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 6.6e-52 208.0 125 76.0
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 8.7e-52 207.6 115 80.9
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 1.1e-51 207.2 107 91.6
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 1.1e-51 207.2 115 77.4
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 1.1e-51 207.2 115 83.5
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 1.5e-51 206.8 115 81.7
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 1.9e-51 206.5 119 75.6
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 1.9e-51 206.5 115 80.9
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 2.5e-51 206.1 115 80.0
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 3.3e-51 205.7 112 80.4
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 4.3e-51 205.3 127 74.8
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 4.3e-51 205.3 115 80.9
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 4.3e-51 205.3 127 74.0
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 5.6e-51 204.9 115 80.0
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 9.6e-51 204.1 114 80.7
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 1.2e-50 203.8 115 79.1
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 1.2e-50 203.8 127 73.2
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 1.2e-50 203.8 127 76.4
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 1.6e-50 203.4 116 81.9
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 2.1e-50 203.0 115 80.9
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 3.6e-50 202.2 115 80.0
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 3.6e-50 202.2 110 85.5
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 3.6e-50 202.2 116 79.3
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 4.7e-50 201.8 134 73.1
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 8.1e-50 201.1 127 72.4
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 1.4e-49 200.3 135 72.6
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 1.8e-49 199.9 114 83.3
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 1.8e-49 199.9 115 75.7
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 3.1e-49 199.1 131 71.8
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 4.0e-49 198.7 133 70.7
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 5.3e-49 198.4 114 80.7
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 2.0e-48 196.4 101 91.1
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 2.6e-48 196.1 103 88.3
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 1.7e-47 193.4 115 78.3
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 6.4e-47 191.4 115 76.5
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 4.6e-45 185.3 121 73.6
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 6.6e-44 181.4 103 85.4
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 7.3e-43 177.9 98 82.7
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 1.3e-42 177.2 111 73.9
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 2.8e-42 176.0 99 81.8
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 3.6e-42 175.6 98 86.7
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 2.4e-41 172.9 135 65.2
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 4.0e-41 172.2 128 67.2
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 5.8e-40 168.3 116 63.8
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 9.9e-40 167.5 102 78.4
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 4.9e-39 165.2 78 96.2
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 8.4e-39 164.5 122 63.9
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 4.2e-38 162.2 120 63.3
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 6.0e-37 158.3 116 62.9
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 2.5e-35 152.9 89 77.5
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 6.9e-33 144.8 123 60.2
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 2.9e-31 139.4 120 55.8
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 2.3e-28 129.8 119 57.1
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.9e-28 129.0 59 96.6
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 6.7e-28 128.3 124 53.2
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 8.2e-26 121.3 56 92.9
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.3e-23 114.0 103 57.3
CiPaw.04G091100 Carya illinoinensis HOM05D004438 ORTHO05D005256 2.9e-23 112.8 62 83.9
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.1e-22 110.9 102 56.9
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 6.7e-20 101.7 66 62.1
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 1.1e-17 94.4 77 53.2
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 1.4e-17 94.0 99 46.5
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 6.9e-17 91.7 113 42.5
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 2.3e-12 76.6 35 100.0
CSS0036545 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 5.7e-11 72.0 35 88.6
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 6.9e-09 65.1 32 84.4
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 2.6e-08 63.2 35 77.1
SalBow1G8643 Salvia bowleyana HOM05D000379 ORTHO05D000254 1.3e-07 60.8 33 75.8


User provided reference genes

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