Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000184g0150 Nicotiana tabacum HOM05D000219 ORTHO05D004649 3.6e-312 1073.9 524 100.0
Nitab4.5_0009050g0040 Nicotiana tabacum HOM05D000219 ORTHO05D004649 2.1e-302 1041.6 524 96.8
Sopen04g022970 Solanum pennellii HOM05D000219 ORTHO05D004649 1.1e-255 886.3 531 82.9
CAN.G1235.19 Capsicum annuum HOM05D000219 ORTHO05D004649 2.4e-234 815.5 517 79.5
Peaxi162Scf00106g01118 Petunia axillaris HOM05D000219 ORTHO05D004649 2.4e-234 815.5 542 76.9
Solyc04g051600.4 Solanum lycopersicum HOM05D000219 ORTHO05D004649 2.5e-215 752.3 483 78.9
Cc07_g16490 Coffea canephora HOM05D000219 ORTHO05D004649 1.3e-195 686.8 527 64.3
GSVIVG01022253001 Vitis vinifera HOM05D000219 ORTHO05D004649 4.3e-191 671.8 528 64.4
Ciclev10027573m.g Citrus clementina HOM05D000219 ORTHO05D004649 4.8e-190 668.3 530 62.5
TAR625G1522 Trochodendron aralioides HOM05D000219 ORTHO05D004649 5.3e-189 664.8 529 62.6
ECA234G1541 Erigeron canadensis HOM05D000219 ORTHO05D004649 6.5e-187 657.9 529 63.1
CSS0031787 Camellia sinensis var. sinensis HOM05D000219 ORTHO05D004649 2.5e-186 656.0 529 62.9
TWI79G1233 Tripterygium wilfordii HOM05D000219 ORTHO05D004649 4.2e-186 655.2 527 63.2
PGSC0003DMG400031193 Solanum tuberosum HOM05D000219 ORTHO05D004649 5.1e-184 648.3 478 70.9
Dinv19467 Davidia involucrata HOM05D000219 ORTHO05D004649 1.5e-183 646.7 484 66.7
HanXRQChr10g0311141 Helianthus annuus HOM05D000219 ORTHO05D004649 2.5e-183 646.0 526 62.2
Oeu035604.1 Olea europaea HOM05D000219 ORTHO05D004649 5.7e-183 644.8 550 61.1
Oeu027201.4 Olea europaea HOM05D000219 ORTHO05D004649 1.3e-182 643.7 530 62.6
QL06p031679 Quercus lobata HOM05D000219 ORTHO05D004649 1.3e-182 643.7 532 61.8
Potri.002G233300 Populus trichocarpa HOM05D000219 ORTHO05D004649 1.6e-182 643.3 526 61.2
Thhalv10016524m.g Eutrema salsugineum HOM05D000219 ORTHO05D004649 4.5e-180 635.2 525 61.1
CsaV3_6G042230 Cucumis sativus L. HOM05D000219 ORTHO05D004649 3.8e-179 632.1 529 61.2
AL4G26840 Arabidopsis lyrata HOM05D000219 ORTHO05D004649 5.0e-179 631.7 517 61.3
MSTRG.2524 Avicennia marina HOM05D000219 ORTHO05D004649 5.0e-179 631.7 532 60.7
Carub.0004s1368 Capsella rubella HOM05D000219 ORTHO05D004649 6.5e-179 631.3 527 60.3
Prupe.1G573900 Prunus persica HOM05D000219 ORTHO05D004649 6.5e-179 631.3 524 60.5
SalBow6G5746 Salvia bowleyana HOM05D000219 ORTHO05D004649 2.5e-178 629.4 530 60.0
BcaB02g10403 Brassica carinata HOM05D000219 ORTHO05D004649 3.2e-178 629.0 531 60.1
Eucgr.H04885 Eucalyptus grandis HOM05D000219 ORTHO05D004649 7.2e-178 627.9 527 60.3
CANSAT64G2196 Cannabis sativa HOM05D000219 ORTHO05D004649 2.1e-177 626.3 522 60.7
Manes.11G020000 Manihot esculenta HOM05D000219 ORTHO05D004649 2.1e-177 626.3 484 64.7
MD05G1030700 Malus domestica HOM05D000219 ORTHO05D004649 2.7e-177 625.9 524 58.8
BcaC02g11270 Brassica carinata HOM05D000219 ORTHO05D004649 4.6e-177 625.2 531 59.7
Cfa002771 Carpinus fangiana HOM05D000219 ORTHO05D004649 4.6e-177 625.2 533 60.8
THA.LOC104800903 Tarenaya hassleriana HOM05D000219 ORTHO05D004649 4.6e-177 625.2 527 59.8
A03p17780 Brassica napus HOM05D000219 ORTHO05D004649 6.1e-177 624.8 530 59.6
Carub.0004s1289 Capsella rubella HOM05D000219 ORTHO05D004649 6.1e-177 624.8 528 60.4
COL.COLO4_16836 Corchorus olitorius HOM05D000219 ORTHO05D004649 6.1e-177 624.8 528 61.4
FvH4_1g22971 Fragaria vesca HOM05D000219 ORTHO05D004649 7.9e-177 624.4 514 59.9
FvH4_2g15830 Fragaria vesca HOM05D000219 ORTHO05D004649 7.9e-177 624.4 524 59.9
Rhsim10G0148200 Rhododendron simsii HOM05D000219 ORTHO05D004649 1.0e-176 624.0 530 60.8
AT2G32320 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 1.4e-176 623.6 526 58.9
FAN24G0946 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.8e-176 623.2 524 59.7
Carub.0004s1193 Capsella rubella HOM05D000219 ORTHO05D004649 2.3e-176 622.9 530 59.2
CiPaw.15G021800 Carya illinoinensis HOM05D000219 ORTHO05D004649 3.0e-176 622.5 532 60.3
Lsat_1_v5_gn_7_9060 Lactuca sativa HOM05D000219 ORTHO05D004649 6.7e-176 621.3 512 61.9
C03p20860 Brassica napus HOM05D000219 ORTHO05D004649 8.8e-176 620.9 530 59.4
Duzib235G0760 Durio zibethinus HOM05D000219 ORTHO05D004649 1.5e-175 620.2 526 59.9
Sed0023684 Sechium edule HOM05D000219 ORTHO05D004649 1.5e-175 620.2 530 58.9
C04p18270 Brassica napus HOM05D000219 ORTHO05D004649 2.0e-175 619.8 535 58.5
Gorai.009G178600 Gossypium raimondii HOM05D000219 ORTHO05D004649 2.6e-175 619.4 528 60.8
Gohir.A05G170300 Gossypium hirsutum HOM05D000219 ORTHO05D004649 3.3e-175 619.0 528 60.8
Sp4g14010 Schrenkiella parvula HOM05D000219 ORTHO05D004649 4.4e-175 618.6 530 58.9
CAN.G1044.3 Capsicum annuum HOM05D000219 ORTHO05D004649 5.7e-175 618.2 419 75.9
FAN20G1304 Fragaria x ananassa HOM05D000219 ORTHO05D004649 2.8e-174 615.9 524 59.5
A05p13880 Brassica napus HOM05D000219 ORTHO05D004649 3.7e-174 615.5 537 58.3
FAN15G1293 Fragaria x ananassa HOM05D000219 ORTHO05D004649 4.8e-174 615.1 524 59.7
MELO3C007464.2 Cucumis melo HOM05D000219 ORTHO05D004649 1.1e-173 614.0 531 59.1
SGA_v2.0_scaffold2G01286 Striga asiatica HOM05D000219 ORTHO05D004649 1.2e-172 610.5 543 57.5
Sabra02G0178000 Salix brachista HOM05D000219 ORTHO05D004649 1.0e-171 607.4 612 52.3
Actinidia39311 Actinidia chinensis HOM05D000219 ORTHO05D004649 2.9e-171 605.9 522 60.0
unitig_899.g14613 Utricularia gibba HOM05D000219 ORTHO05D004649 2.9e-171 605.9 542 56.6
BolC4t23384H Brassica oleracea HOM05D000219 ORTHO05D004649 5.0e-171 605.1 562 55.7
ClCG01G015950 Citrullus lanatus HOM05D000219 ORTHO05D004649 5.0e-171 605.1 556 57.7
Aa31LG5G4650 Aethionema arabicum HOM05D000219 ORTHO05D004649 1.1e-170 604.0 487 61.8
DCAR_027131 Daucus carota HOM05D000219 ORTHO05D004649 9.4e-170 600.9 526 58.4
BolC3t14438H Brassica oleracea HOM05D000219 ORTHO05D004649 2.1e-169 599.7 563 56.1
BraA05t20324Z Brassica rapa HOM05D000219 ORTHO05D004649 3.6e-169 599.0 566 55.3
BraA03t11042Z Brassica rapa HOM05D000219 ORTHO05D004649 7.9e-169 597.8 557 56.2
Sc05g0007990 Simmondsia chinensis HOM05D000219 ORTHO05D004649 1.4e-168 597.0 535 56.8
Hund21266 Selenicereus undatus HOM05D000219 ORTHO05D004649 1.1e-165 587.4 507 56.6
Lj8A365T11 Lonicera japonica HOM05D000219 ORTHO05D004649 7.0e-165 584.7 534 56.9
FAN23G1549 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.6e-164 583.6 491 58.5
Hma1.2p1_0975F.1_g243180 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 1.2e-161 573.9 526 55.7
FAN26G0146 Fragaria x ananassa HOM05D000219 ORTHO05D004649 6.1e-161 571.6 484 58.1
Lalb_Chr11g0075091 Lupinus albus HOM05D000219 ORTHO05D004649 1.0e-160 570.9 525 56.2
Nn1g05995 Nelumbo nucifera HOM05D000219 ORTHO05D004649 3.0e-160 569.3 527 56.2
TPR.G6992 Trifolium pratense HOM05D000219 ORTHO05D004649 5.2e-160 568.5 524 55.2
VMungo0720G2488 Vigna mungo HOM05D000219 ORTHO05D004649 7.5e-159 564.7 523 56.0
Ca_09426_v3 Cicer arietinum L. HOM05D000219 ORTHO05D004649 9.7e-159 564.3 527 55.6
Phvul.010G125700 Phaseolus vulgaris HOM05D000219 ORTHO05D004649 9.7e-159 564.3 515 56.5
Psat0s1144g0040 Pisum sativum HOM05D000219 ORTHO05D004649 1.7e-158 563.5 521 55.1
AUR62016924 Chenopodium quinoa HOM05D000219 ORTHO05D004649 8.2e-158 561.2 526 54.6
Glyma.16G091600 Glycine max HOM05D000219 ORTHO05D004649 8.2e-158 561.2 522 55.2
Psat7g054840 Pisum sativum HOM05D000219 ORTHO05D004649 1.8e-157 560.1 521 55.5
Glyma.10G001600 Glycine max HOM05D000219 ORTHO05D004649 2.4e-157 559.7 523 54.7
FAN27G2048 Fragaria x ananassa HOM05D000219 ORTHO05D004649 5.3e-157 558.5 524 55.9
Medtr7g115250 Medicago truncatula HOM05D000219 ORTHO05D004649 2.7e-156 556.2 528 54.0
Lj5g0005884 Lotus japonicus HOM05D000219 ORTHO05D004649 2.2e-155 553.1 527 53.5
vmacro14893 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 2.2e-155 553.1 576 52.6
Thecc.06G220500 Theobroma cacao HOM05D000219 ORTHO05D004649 5.0e-155 552.0 448 62.1
Atru.chr10.1102 Acer truncatum HOM05D000219 ORTHO05D004649 2.7e-153 546.2 395 68.9
CARHR008820 Cardamine hirsuta HOM05D000219 ORTHO05D004649 1.0e-152 544.3 473 58.1
AUR62013249 Chenopodium quinoa HOM05D000219 ORTHO05D004649 1.0e-152 544.3 528 53.0
arahy.Tifrunner.gnm1.ann1.V7J6Z4 Arachis hypogaea HOM05D000219 ORTHO05D004649 2.3e-152 543.1 481 56.5
AUR62010269 Chenopodium quinoa HOM05D000219 ORTHO05D004649 2.3e-152 543.1 530 52.6
arahy.Tifrunner.gnm1.ann1.M2QW19 Arachis hypogaea HOM05D000219 ORTHO05D004649 4.0e-152 542.3 481 56.1
Lj6g0002222 Lotus japonicus HOM05D000219 ORTHO05D004649 1.3e-150 537.3 485 55.5
Gohir.D05G173400 Gossypium hirsutum HOM05D000219 ORTHO05D004649 2.8e-150 536.2 475 58.5
vmacro12890 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 3.7e-150 535.8 695 45.6
Haze_25064 Corylus avellana HOM05D000219 ORTHO05D004649 1.6e-145 520.4 567 51.5
RcHm_v2.0_Chr2g0117491 Rosa chinensis HOM05D000219 ORTHO05D004649 1.1e-141 507.7 394 61.9
AT2G31580 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 3.1e-141 506.1 425 60.7
Hma1.2p1_0252F.1_g102800 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 1.1e-138 497.7 473 54.8
PGR102G3329 Punica granatum HOM05D000219 ORTHO05D004649 2.9e-134 483.0 374 63.4
Lj7C160G16 Lonicera japonica HOM05D000219 ORTHO05D004649 3.7e-134 482.6 365 64.1
COL.COLO4_17688 Corchorus olitorius HOM05D000219 ORTHO05D004649 1.5e-122 444.1 403 58.3
EL10Ac8g20632 Beta vulgaris HOM05D000219 ORTHO05D004649 4.7e-121 439.1 514 46.5
Os05g0535500 Oryza sativa ssp. japonica HOM05D000219 ORTHO05D004649 8.3e-118 428.3 532 45.3
Migut.B00934 Erythranthe guttata HOM05D000219 ORTHO05D004649 1.7e-110 404.1 387 55.0
Atru.chr10.1005 Acer truncatum HOM05D000219 ORTHO05D004649 1.1e-104 384.8 421 51.5
MBI04_g33333_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004649 9.3e-101 371.7 254 71.7
TAR628G0592 Trochodendron aralioides HOM05D000219 ORTHO05D004649 1.9e-90 337.4 314 54.8
PSO782G0604 Papaver somniferum HOM05D000219 ORTHO05D004649 1.5e-87 327.8 254 59.4
Aqoxy2G01146 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 2.2e-86 323.9 255 62.7
Haze_08455 Corylus avellana HOM05D000219 ORTHO05D004649 2.2e-86 323.9 349 51.6
Aqoxy3G01228 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 1.4e-85 321.2 255 62.4
HPP92_021547 Vanilla planifolia HOM05D000219 ORTHO05D004649 4.6e-84 316.2 255 59.6
ATR0322G032 Amborella trichopoda HOM05D000219 ORTHO05D004649 3.3e-82 310.1 252 61.5
Atru.chr10.1697 Acer truncatum HOM05D000219 ORTHO05D004649 5.6e-82 309.3 297 53.9
Zm00001eb294000 Zea mays HOM05D000219 ORTHO05D004649 1.3e-81 308.1 359 45.4
Glyma.16G117567 Glycine max HOM05D000219 ORTHO05D004649 1.8e-80 304.3 238 62.2
PSO541G5787 Papaver somniferum HOM05D000219 ORTHO05D004649 2.9e-78 297.0 212 63.7
PSO063G1486 Papaver somniferum HOM05D000219 ORTHO05D004649 3.8e-78 296.6 299 49.5
Mapoly0167s0023 Marchantia polymorpha HOM05D000219 ORTHO05D004649 1.9e-77 294.3 262 56.5
MBI05_g03455_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004649 9.3e-77 292.0 222 64.4
PSO063G0175 Papaver somniferum HOM05D000219 ORTHO05D004649 6.0e-76 289.3 249 56.2
AagrBONN_evm.TU.Sc2ySwM_117.2004 Anthoceros agrestis HOM05D000219 ORTHO05D004649 1.0e-75 288.5 262 55.0
CDE06G2407 Ceratophyllum demersum HOM05D000219 ORTHO05D004649 4.1e-72 276.6 225 62.2
Pp3c1_10760 Physcomitrium patens HOM05D000219 ORTHO05D004649 7.6e-71 272.3 251 54.6
PGSC0003DMG402004545 Solanum tuberosum HOM05D000219 ORTHO05D004649 1.1e-69 268.5 148 86.5
CBR_g11164 Chara braunii HOM05D000219 ORTHO05D004649 1.4e-69 268.1 211 59.2
AUR62014746 Chenopodium quinoa HOM05D000219 ORTHO05D004649 2.3e-67 260.8 248 51.2
TAR628G0698 Trochodendron aralioides HOM05D000219 ORTHO05D004649 1.3e-65 255.0 167 74.9
Cre13.g581550 Chlamydomonas reinhardtii HOM05D000219 ORTHO05D004649 2.2e-65 254.2 252 49.6
CANSAT01G1436 Cannabis sativa HOM05D000219 ORTHO05D004649 4.1e-64 250.0 264 50.8
RcHm_v2.0_Chr6g0279211 Rosa chinensis HOM05D000219 ORTHO05D004649 6.9e-64 249.2 268 50.0
SMO146G0027 Selaginella moellendorffii HOM05D000219 ORTHO05D004649 7.9e-60 235.7 245 48.2
PRCOL_00002092 Prasinoderma coloniale HOM05D000219 ORTHO05D004649 5.1e-59 233.0 251 48.2
Atru.chr10.1696 Acer truncatum HOM05D000219 ORTHO05D004649 3.7e-57 226.9 142 73.2
SHI31711 Sapria himalayana HOM05D000219 ORTHO05D004649 2.6e-55 220.7 168 59.5
HanXRQChr10g0318971 Helianthus annuus HOM05D000219 ORTHO05D004649 3.4e-55 220.3 164 66.5
HPP92_021534 Vanilla planifolia HOM05D000219 ORTHO05D004649 5.2e-51 206.5 177 57.6
Cfa023086 Carpinus fangiana HOM05D000219 ORTHO05D004649 1.1e-50 205.3 228 45.6
HPP92_021538 Vanilla planifolia HOM05D000219 ORTHO05D004649 1.3e-46 191.8 223 47.1
vmacro14894 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 1.7e-46 191.4 279 44.1
PGSC0003DMG401004545 Solanum tuberosum HOM05D000219 ORTHO05D004649 1.9e-45 188.0 144 68.8
Sopen04g022950 Solanum pennellii HOM05D000219 ORTHO05D000001 5.3e-40 169.9 248 38.3
Glyma.16G117633 Glycine max HOM05D000219 ORTHO05D004649 6.1e-36 156.4 210 41.9
PGSC0003DMG400016550 Solanum tuberosum HOM05D000219 ORTHO05D004649 9.8e-34 149.1 77 92.2
Haze_26924 Corylus avellana HOM05D000219 ORTHO05D004649 4.8e-33 146.7 161 44.7
Lj7A96G45 Lonicera japonica HOM05D000219 ORTHO05D004649 2.4e-32 144.4 96 74.0
CARHR125230 Cardamine hirsuta HOM05D000219 ORTHO05D004649 5.4e-32 143.3 110 59.1
CAN.G555.5 Capsicum annuum HOM05D000219 ORTHO05D000137 5.9e-31 139.8 75 84.0
HanXRQChr10g0319001 Helianthus annuus HOM05D000219 ORTHO05D004649 1.3e-30 138.7 94 73.4
AagrBONN_evm.TU.Sc2ySwM_344.3315 Anthoceros agrestis HOM05D000219 ORTHO05D004649 1.7e-30 138.3 128 53.1
Nitab4.5_0005102g0050 Nicotiana tabacum HOM05D000219 ORTHO05D004649 1.7e-30 138.3 80 86.2
HanXRQChr10g0318981 Helianthus annuus HOM05D000219 ORTHO05D004649 3.6e-28 130.6 121 52.1
RcHm_v2.0_Chr2g0117501 Rosa chinensis HOM05D000219 ORTHO05D004649 3.6e-28 130.6 94 64.9
Cpa.g.c44268 Carica papaya HOM05D000219 ORTHO05D004649 4.7e-28 130.2 70 78.6
SHI31709 Sapria himalayana HOM05D000219 ORTHO05D004649 3.7e-25 120.6 112 50.9
vmacro13881 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 7.0e-24 116.3 106 54.7
vmacro20266 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 1.3e-22 112.1 212 34.4
PGSC0003DMG401026834 Solanum tuberosum HOM05D000219 ORTHO05D049347 1.9e-21 108.2 60 83.3
HanXRQChr10g0318991 Helianthus annuus HOM05D000219 ORTHO05D021059 1.6e-20 105.1 66 72.7
Nitab4.5_0005102g0040 Nicotiana tabacum HOM05D000219 ORTHO05D049347 6.1e-20 103.2 52 90.4
AL4G27720 Arabidopsis lyrata HOM05D000219 ORTHO05D021059 3.0e-19 100.9 94 55.3
GSVIVG01006301001 Vitis vinifera HOM05D000026 ORTHO05D000127 1.2e-18 99.0 111 45.9
PGSC0003DMG400020961 Solanum tuberosum HOM05D000219 ORTHO05D004649 7.5e-18 96.3 80 60.0
Atru.chr10.1103 Acer truncatum HOM05D000219 ORTHO05D004649 4.9e-17 93.6 66 63.6
Atru.chr10.1695 Acer truncatum HOM05D000219 ORTHO05D021059 4.1e-16 90.5 82 58.5
CARHR125240 Cardamine hirsuta HOM05D000219 ORTHO05D004649 4.1e-16 90.5 102 49.0
Lj7A96T47 Lonicera japonica HOM05D000219 ORTHO05D004649 4.1e-16 90.5 52 71.2
Nitab4.5_0005102g0060 Nicotiana tabacum HOM05D000219 ORTHO05D004649 2.0e-15 88.2 43 95.3
Actinidia05378 Actinidia chinensis HOM05D000219 ORTHO05D004649 4.6e-15 87.0 59 64.4
PGSC0003DMG400020960 Solanum tuberosum HOM05D000219 ORTHO05D004649 4.6e-15 87.0 43 93.0
CARHR125220 Cardamine hirsuta HOM05D000219 ORTHO05D021059 2.1e-12 78.2 69 58.0
Gohir.A03G040550 Gossypium hirsutum HOM05D000219 ORTHO05D021059 1.7e-09 68.6 52 67.3
Lj7A96T46 Lonicera japonica HOM05D000219 ORTHO05D004649 1.3e-06 58.9 42 59.5
A02p19800 Brassica napus HOM05D000219 ORTHO05D017689 3.0e-06 57.8 73 41.1
Lj8A365T12 Lonicera japonica HOM05D000219 ORTHO05D004649 6.6e-06 56.6 33 75.8


User provided reference genes

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