Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000182g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-68 261.9 121 100.0
Nitab4.5_0002284g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-26 123.6 80 73.8
Nitab4.5_0001783g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-18 96.3 62 74.2
Nitab4.5_0005049g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.9e-18 95.1 60 70.0
Nitab4.5_0002416g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.6e-18 94.4 85 52.9
Nitab4.5_0000068g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-17 92.8 60 68.3
Nitab4.5_0000092g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-17 91.7 60 63.3
Nitab4.5_0001907g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-17 91.3 60 68.3
Nitab4.5_0003185g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.5e-17 90.5 60 73.3
Nitab4.5_0002004g0060 Nicotiana tabacum HOM05D000040 ORTHO05D010138 1.6e-16 89.7 60 65.0
Nitab4.5_0000468g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-16 89.0 60 65.0
Nitab4.5_0003940g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-16 88.2 60 66.7
Nitab4.5_0000002g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.2e-16 87.8 72 56.9
Nitab4.5_0005112g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.2e-16 87.8 55 72.7
PGSC0003DMG400001167 Solanum tuberosum HOM05D000024 ORTHO05D000007 8.1e-16 87.4 108 37.0
Nitab4.5_0000031g0320 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-15 85.5 84 45.2
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-14 83.6 58 62.1
Nitab4.5_0001880g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-14 82.4 75 50.7
Nitab4.5_0000457g0470 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.4e-14 82.0 58 56.9
Nitab4.5_0000410g0260 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-14 81.6 58 60.3
Nitab4.5_0000234g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.8e-14 81.3 46 84.8
Nitab4.5_0000914g0250 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.8e-14 81.3 60 60.0
Nitab4.5_0003500g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.5e-14 80.9 61 57.4
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.5e-14 80.9 58 60.3
Nitab4.5_0005560g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.8e-14 80.5 64 50.0
Nitab4.5_0000270g0210 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-13 79.3 58 56.9
Nitab4.5_0009471g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-13 78.6 58 56.9
Nitab4.5_0000096g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-13 78.2 58 58.6
Nitab4.5_0003374g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-13 78.2 58 56.9
Nitab4.5_0006838g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-13 78.2 71 52.1
Nitab4.5_0000261g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.4e-13 77.8 60 55.0
Nitab4.5_0001146g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.4e-13 77.8 71 50.7
Nitab4.5_0005284g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.4e-13 77.8 73 49.3
Nitab4.5_0005284g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.3e-13 77.4 73 47.9
Nitab4.5_0007986g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-12 77.0 57 54.4
Nitab4.5_0000149g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-12 75.9 58 58.6
Nitab4.5_0000171g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-12 75.9 58 56.9
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-12 75.9 58 58.6
Nitab4.5_0000640g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-12 75.5 52 61.5
Nitab4.5_0005517g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-12 75.5 56 58.9
Nitab4.5_0000188g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.1e-12 75.1 60 55.0
Nitab4.5_0003397g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.1e-12 75.1 58 58.6
Nitab4.5_0004728g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.1e-12 75.1 52 67.3
Nitab4.5_0005435g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.1e-12 75.1 53 62.3
Nitab4.5_0007450g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.1e-12 75.1 58 50.0
Nitab4.5_0000063g0330 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.4e-12 74.7 71 47.9
Nitab4.5_0000541g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.4e-12 74.7 53 62.3
Nitab4.5_0001569g0170 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.4e-12 74.7 77 45.5
Nitab4.5_0005065g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-11 73.2 74 40.5
Nitab4.5_0006711g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.8e-11 70.9 53 52.8
Nitab4.5_0008753g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-10 70.5 60 48.3
Nitab4.5_0003312g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-10 70.1 58 55.2
Nitab4.5_0000177g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-10 69.7 58 55.2
Nitab4.5_0000274g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-10 69.7 58 56.9
Nitab4.5_0000465g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-10 69.7 58 50.0
Nitab4.5_0002828g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-10 69.7 58 53.4
Nitab4.5_0009190g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-10 69.7 53 64.2
Nitab4.5_0000008g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-10 69.3 78 44.9
Nitab4.5_0002157g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-10 69.3 57 49.1
Nitab4.5_0000270g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-10 68.9 59 49.2
Nitab4.5_0003729g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-10 68.9 58 53.4
Nitab4.5_0005810g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-10 68.9 60 45.0
Nitab4.5_0001667g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.9e-10 68.6 60 46.7
Nitab4.5_0002586g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.9e-10 68.6 55 56.4
Nitab4.5_0006080g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.9e-10 68.6 58 56.9
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-10 68.2 60 45.0
Nitab4.5_0003665g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-10 68.2 57 49.1
Nitab4.5_0007825g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-10 68.2 58 50.0
Nitab4.5_0000575g0250 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.6e-10 67.8 47 66.0
Nitab4.5_0001307g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.6e-10 67.8 51 54.9
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.6e-10 67.8 60 46.7
Nitab4.5_0002977g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.6e-10 67.8 60 50.0
Nitab4.5_0009493g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.6e-10 67.4 58 51.7
Nitab4.5_0000721g0270 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-09 67.0 58 50.0
Nitab4.5_0002223g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-09 67.0 57 47.4
Nitab4.5_0003978g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-09 67.0 58 50.0
Nitab4.5_0002331g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-09 66.6 60 43.3
Nitab4.5_0003178g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-09 66.6 57 52.6
Nitab4.5_0002045g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-09 66.2 58 55.2
Nitab4.5_0015178g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-09 66.2 58 50.0
Nitab4.5_0000102g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-09 65.9 60 48.3
Nitab4.5_0000902g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-09 65.9 48 56.2
Nitab4.5_0000925g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-09 65.9 60 46.7
Nitab4.5_0002956g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-09 65.9 59 50.8
Nitab4.5_0007582g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-09 65.9 58 55.2
Nitab4.5_0000256g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-09 65.5 57 50.9
Nitab4.5_0001123g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-09 65.5 55 56.4
Nitab4.5_0000006g0160 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-09 65.1 44 70.5
Nitab4.5_0000032g0500 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-09 65.1 60 43.3
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-09 65.1 58 51.7
Nitab4.5_0001264g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-09 65.1 58 46.6
Nitab4.5_0003284g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-09 65.1 58 53.4
Nitab4.5_0003810g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-09 65.1 58 53.4
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.3e-09 64.3 57 52.6
Nitab4.5_0000013g0580 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.5e-09 63.9 57 50.9
Nitab4.5_0000308g0360 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.5e-09 63.9 42 71.4
Nitab4.5_0002507g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.5e-09 63.9 58 51.7
Nitab4.5_0007311g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.5e-09 63.9 58 51.7
Nitab4.5_0000712g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-08 63.2 58 46.6
Nitab4.5_0003208g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-08 63.2 58 51.7
Nitab4.5_0011088g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-08 62.8 58 51.7
Nitab4.5_0000087g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-08 62.4 46 63.0
Nitab4.5_0000491g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-08 62.0 48 60.4
Nitab4.5_0007311g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-08 62.0 56 51.8
Nitab4.5_0000044g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.2e-08 61.2 58 46.6
Nitab4.5_0002284g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.2e-08 61.2 59 47.5
Nitab4.5_0005859g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.1e-08 60.8 57 47.4
Nitab4.5_0000715g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-07 60.1 94 38.3
Nitab4.5_0000010g0200 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-07 59.7 58 43.1
Nitab4.5_0004123g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-07 59.7 51 49.0
Nitab4.5_0002170g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-07 59.3 70 44.3
Nitab4.5_0004776g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-07 59.3 38 65.8
Nitab4.5_0000107g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-07 58.9 58 44.8
Nitab4.5_0000947g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-07 58.9 41 63.4
Nitab4.5_0001790g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-07 58.9 35 68.6
Nitab4.5_0000818g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.9e-07 57.4 58 43.1
Nitab4.5_0002249g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.9e-07 57.4 58 50.0
Nitab4.5_0002624g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.9e-07 57.4 42 59.5
Nitab4.5_0000109g0440 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-06 57.0 58 43.1
Nitab4.5_0000108g0070 Nicotiana tabacum HOM05D000072 ORTHO05D000026 1.5e-06 56.6 62 48.4
Nitab4.5_0003102g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-06 56.2 71 36.6
Nitab4.5_0005210g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-06 56.2 60 40.0
Nitab4.5_0005500g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-06 56.2 57 50.9
Nitab4.5_0009076g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-06 56.2 58 41.4
PGSC0003DMG400024826 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.0e-06 56.2 68 38.2
Nitab4.5_0001046g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-06 55.8 40 57.5
Nitab4.5_0009562g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-06 55.8 70 41.4
Nitab4.5_0005584g0050 Nicotiana tabacum HOM05D000077 ORTHO05D000339 3.4e-06 55.5 58 43.1
Nitab4.5_0003236g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.8e-06 54.7 48 47.9
Nitab4.5_0005100g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.8e-06 54.7 75 41.3
Nitab4.5_0003315g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.6e-06 54.3 58 41.4
Nitab4.5_0025440g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.6e-06 54.3 61 39.3
Nitab4.5_0000026g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.9e-06 53.9 53 39.6
Nitab4.5_0004118g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.9e-06 53.9 57 40.4
Nitab4.5_0004459g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.9e-06 53.9 49 46.9


User provided reference genes

Program Settings