Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000172g2280 Nicotiana tabacum HOM05D001070 ORTHO05D010233 1.6e-103 379.4 189 100.0
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 7.3e-72 274.2 201 72.1
Solyc00g500191.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 7.3e-72 274.2 201 72.1
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 7.3e-72 274.2 201 72.1
Peaxi162Scf01305g00039 Petunia axillaris HOM05D001070 ORTHO05D010233 2.4e-59 232.6 149 78.5
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.2e-55 220.3 163 71.2
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.2e-55 220.3 163 71.2
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.2e-55 220.3 163 71.2
Solyc11g021300.2 Solanum lycopersicum HOM05D001070 ORTHO05D010233 2.1e-55 219.5 169 69.2
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 1.1e-51 207.2 201 60.7
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 1.2e-42 177.2 192 50.0
Peaxi162Scf00080g00522 Petunia axillaris HOM05D001070 ORTHO05D022991 3.5e-42 175.6 130 71.5
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.6e-39 166.8 205 47.3
Solyc02g011850.3 Solanum lycopersicum HOM05D001070 ORTHO05D010233 5.3e-38 161.8 136 62.5
Solyc05g016220.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.2e-37 160.6 128 66.4
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 1.5e-37 160.2 208 46.2
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 1.6e-34 150.2 194 46.4
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 2.1e-34 149.8 183 49.2
Nitab4.5_0000729g0030 Nicotiana tabacum HOM05D001070 ORTHO05D010233 5.1e-33 145.2 89 79.8
Solyc08g016000.2 Solanum lycopersicum HOM05D001070 ORTHO05D002096 4.8e-31 138.7 112 65.2
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.2e-29 134.0 205 42.9
Peaxi162Scf00080g00515 Petunia axillaris HOM05D001070 ORTHO05D010233 9.9e-29 131.0 143 54.5
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 2.1e-26 123.2 129 51.9
Ciclev10014004m.g Citrus clementina HOM05D001070 ORTHO05D010233 4.3e-24 115.5 197 36.5
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 4.3e-24 115.5 197 36.5
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 4.3e-24 115.5 207 34.8
Oeu012820.1 Olea europaea HOM05D000533 ORTHO05D002807 2.8e-23 112.8 121 53.7
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 1.1e-22 110.9 198 36.4
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 3.1e-22 109.4 187 39.0
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 3.1e-22 109.4 160 42.5
HanXRQChr15g0465401 Helianthus annuus HOM05D001070 ORTHO05D002096 3.1e-22 109.4 160 42.5
HanXRQChr15g0465501 Helianthus annuus HOM05D001070 ORTHO05D010233 3.1e-22 109.4 160 42.5
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 3.1e-22 109.4 160 42.5
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 3.1e-22 109.4 160 42.5
HanXRQChr00c0703g0576891 Helianthus annuus HOM05D001070 ORTHO05D002096 1.2e-21 107.5 138 45.7
HanXRQChr08g0222861 Helianthus annuus HOM05D001070 ORTHO05D002096 1.2e-21 107.5 138 45.7
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 4.5e-21 105.5 194 35.6
Nn029s41579 Nelumbo nucifera HOM05D001070 ORTHO05D010233 1.4e-19 100.5 115 55.7
Nitab4.5_0004841g0070 Nicotiana tabacum HOM05D001070 ORTHO05D022991 4.2e-19 99.0 169 40.8
Lju5009P0T37 Lonicera japonica HOM05D001070 ORTHO05D002096 3.3e-16 89.4 212 36.3
Oeu012762.2 Olea europaea HOM05D001070 ORTHO05D002096 3.3e-16 89.4 96 51.0
TPR.G31143 Trifolium pratense HOM05D001070 ORTHO05D010233 3.7e-15 85.9 175 32.6
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 1.8e-14 83.6 196 32.1
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 1.8e-14 83.6 196 32.1
EL10Ac5g11665 Beta vulgaris HOM05D001070 ORTHO05D002096 6.9e-14 81.6 102 44.1
EL10Ac7g17376 Beta vulgaris HOM05D001070 ORTHO05D002096 6.9e-14 81.6 102 44.1
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 4.5e-13 79.0 192 30.7
Gohir.A05G323700 Gossypium hirsutum HOM05D001070 ORTHO05D002096 6.5e-12 75.1 86 46.5
Gohir.D01G134260 Gossypium hirsutum HOM05D001070 ORTHO05D010233 1.1e-11 74.3 79 50.6
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 1.1e-11 74.3 85 45.9
C02p28780 Brassica napus HOM05D001070 ORTHO05D010233 4.2e-11 72.4 192 27.6
C09p25520 Brassica napus HOM05D001070 ORTHO05D010233 4.2e-11 72.4 192 27.6
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 4.2e-11 72.4 192 27.6
HanXRQChr17g0557721 Helianthus annuus HOM05D001070 ORTHO05D002096 5.5e-11 72.0 96 45.8
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 7.9e-10 68.2 83 50.6
BolSC35t60710H Brassica oleracea HOM05D001070 ORTHO05D002096 1.8e-09 67.0 141 31.9
Glyma.02G177300 Glycine max HOM05D001070 ORTHO05D010233 1.1e-08 64.3 79 41.8
HPP92_028416 Vanilla planifolia HOM05D041394 ORTHO05D002096 9.7e-08 61.2 146 32.9
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 8.2e-07 58.2 58 46.6
HanXRQChr00c0379g0574341 Helianthus annuus HOM05D001070 ORTHO05D002096 4.1e-06 55.8 83 43.4
TAR365G0787 Trochodendron aralioides HOM05D001070 ORTHO05D002096 5.3e-06 55.5 79 38.0


User provided reference genes

Program Settings