Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000172g2260 Nicotiana tabacum HOM05D001070 ORTHO05D002096 6.8e-116 420.6 204 100.0
PGSC0003DMG400004187 Solanum tuberosum HOM05D001070 ORTHO05D002096 3.4e-51 205.7 142 74.6
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.8e-50 202.2 145 73.1
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 3.8e-50 202.2 145 73.1
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.8e-50 202.2 145 73.1
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.8e-50 202.2 145 73.1
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 3.8e-50 202.2 145 73.1
Nitab4.5_0023521g0010 Nicotiana tabacum HOM05D000388 ORTHO05D000473 1.3e-39 167.2 125 69.6
Nitab4.5_0002628g0020 Nicotiana tabacum HOM05D001070 ORTHO05D002096 1.1e-30 137.5 86 82.6
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 9.7e-30 134.4 137 54.7
Nitab4.5_0012234g0030 Nicotiana tabacum HOM05D001070 ORTHO05D002096 1.8e-28 130.2 86 79.1
CiPaw.01G098400 Carya illinoinensis HOM05D001070 ORTHO05D002096 1.5e-27 127.1 139 55.4
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 2.0e-27 126.7 267 38.6
Solyc11g021310.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 5.9e-27 125.2 112 64.3
ClCG11G009270 Citrullus lanatus HOM05D001070 ORTHO05D002096 1.4e-25 120.6 225 39.6
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 2.5e-25 119.8 131 52.7
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 7.2e-25 118.2 143 51.0
Nitab4.5_0004841g0060 Nicotiana tabacum HOM05D001070 ORTHO05D002096 1.2e-24 117.5 73 82.2
Solyc00g500040.1 Solanum lycopersicum HOM05D001070 ORTHO05D013014 2.7e-24 116.3 73 80.8
Solyc00g500084.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 2.7e-24 116.3 73 80.8
Solyc00g500196.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 2.7e-24 116.3 73 80.8
Solyc00g500191.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 4.7e-24 115.5 89 68.5
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 3.3e-22 109.4 137 51.1
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 9.7e-22 107.8 142 47.2
BolSC35t60710H Brassica oleracea HOM05D001070 ORTHO05D002096 9.1e-20 101.3 142 45.1
Solyc11g044680.3 Solanum lycopersicum HOM05D001070 ORTHO05D002096 2.6e-19 99.8 73 68.5
CAN.G134.9 Capsicum annuum HOM05D001070 ORTHO05D002096 7.2e-17 91.7 99 57.6
Peaxi162Scf00080g00516 Petunia axillaris HOM05D001070 ORTHO05D002096 7.2e-17 91.7 68 72.1
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 2.1e-16 90.1 132 41.7
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 4.7e-16 89.0 53 75.5
Solyc02g011860.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 4.7e-16 89.0 71 67.6
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 1.8e-15 87.0 130 43.1
EL10Ac5g11665 Beta vulgaris HOM05D001070 ORTHO05D002096 3.0e-15 86.3 145 42.1
EL10Ac7g17376 Beta vulgaris HOM05D001070 ORTHO05D002096 3.0e-15 86.3 145 42.1
CAN.G1185.5 Capsicum annuum HOM05D001070 ORTHO05D010055 3.0e-15 86.3 81 61.7
CAN.G965.9 Capsicum annuum HOM05D001070 ORTHO05D002096 4.4e-14 82.4 70 67.1
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 4.4e-14 82.4 53 69.8
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 4.4e-14 82.4 53 69.8
Peaxi162Scf00080g00514 Petunia axillaris HOM05D011856 ORTHO05D013014 4.4e-14 82.4 44 77.3
Solyc00g500190.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 4.4e-14 82.4 142 40.8
HanXRQChr00c0703g0576891 Helianthus annuus HOM05D001070 ORTHO05D002096 1.3e-13 80.9 88 48.9
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 1.3e-13 80.9 88 48.9
HanXRQChr08g0222861 Helianthus annuus HOM05D001070 ORTHO05D002096 1.3e-13 80.9 88 48.9
HanXRQChr15g0465401 Helianthus annuus HOM05D001070 ORTHO05D002096 1.3e-13 80.9 88 48.9
HanXRQChr17g0557721 Helianthus annuus HOM05D001070 ORTHO05D002096 1.3e-13 80.9 88 48.9
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 1.3e-13 80.9 88 48.9
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 1.3e-13 80.9 88 48.9
Lju5009P0T37 Lonicera japonica HOM05D001070 ORTHO05D002096 2.2e-13 80.1 50 72.0
Hund27646 Selenicereus undatus HOM05D001070 ORTHO05D002096 2.8e-13 79.7 97 45.4
Hund27834 Selenicereus undatus HOM05D001070 ORTHO05D002096 2.8e-13 79.7 97 45.4
Hund29319 Selenicereus undatus HOM05D001070 ORTHO05D002096 2.8e-13 79.7 97 45.4
CAN.G100.34 Capsicum annuum HOM05D001200 ORTHO05D002731 7.0e-12 75.1 57 71.9
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 7.0e-12 75.1 128 39.8
Psat0s2011g0040 Pisum sativum HOM05D000729 ORTHO05D001063 2.7e-11 73.2 240 25.8
HPP92_028431 Vanilla planifolia HOM05D001070 ORTHO05D002096 4.5e-11 72.4 110 38.2
Peaxi162Scf00139g00015 Petunia axillaris HOM05D001070 ORTHO05D002096 5.9e-11 72.0 39 82.1
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 7.7e-11 71.6 53 58.5
Peaxi162Scf00130g00416 Petunia axillaris HOM05D001070 ORTHO05D002096 1.0e-10 71.2 37 86.5
Peaxi162Scf00338g00618 Petunia axillaris HOM05D001070 ORTHO05D002096 1.0e-10 71.2 37 86.5
Peaxi162Scf00536g00047 Petunia axillaris HOM05D001070 ORTHO05D002096 1.0e-10 71.2 37 86.5
CAN.G1045.8 Capsicum annuum HOM05D001070 ORTHO05D002096 1.3e-10 70.9 51 74.5
TPR.G19445 Trifolium pratense HOM05D001070 ORTHO05D002096 2.2e-10 70.1 126 34.1
CAN.G262.4 Capsicum annuum HOM05D007952 ORTHO05D009823 1.1e-09 67.8 51 70.6
Migut.D01388 Erythranthe guttata HOM05D001070 ORTHO05D002096 1.1e-09 67.8 102 44.1
BolSC45t60902H Brassica oleracea HOM05D001070 ORTHO05D002096 1.2e-08 64.3 145 33.8
Oeu010690.1 Olea europaea HOM05D001070 ORTHO05D002096 4.7e-08 62.4 76 50.0
Oeu022558.1 Olea europaea HOM05D001070 ORTHO05D002096 4.7e-08 62.4 75 53.3
Sed0021842 Sechium edule HOM05D001070 ORTHO05D002096 4.7e-08 62.4 158 36.7
BraSC143t45653Z Brassica rapa HOM05D001070 ORTHO05D002096 8.0e-08 61.6 272 27.2
Nitab4.5_0001152g0850 Nicotiana tabacum HOM05D011856 ORTHO05D013014 1.0e-07 61.2 36 77.8
Solyc02g011850.3 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.0e-07 61.2 40 72.5
DCAR_019125 Daucus carota HOM05D001070 ORTHO05D002096 1.4e-07 60.8 110 41.8
Nitab4.5_0004137g0090 Nicotiana tabacum HOM05D001070 ORTHO05D002096 2.3e-07 60.1 53 62.3
Sed0000142 Sechium edule HOM05D001070 ORTHO05D002096 4.0e-07 59.3 83 51.8
BolSC29t60552H Brassica oleracea HOM05D001070 ORTHO05D002096 5.2e-07 58.9 145 32.4
BraSC59t46545Z Brassica rapa HOM05D001070 ORTHO05D002096 5.2e-07 58.9 263 27.4
PSO541G2875 Papaver somniferum HOM05D001070 ORTHO05D002096 8.8e-07 58.2 122 36.1
PSO541G5077 Papaver somniferum HOM05D001070 ORTHO05D002096 1.2e-06 57.8 122 35.2
TAR624G0722 Trochodendron aralioides HOM05D001070 ORTHO05D002096 2.0e-06 57.0 73 47.9
BolSC35t60685H Brassica oleracea HOM05D001070 ORTHO05D002096 2.6e-06 56.6 124 34.7
TAR365G0787 Trochodendron aralioides HOM05D001070 ORTHO05D002096 2.6e-06 56.6 28 82.1
TAR626G0349 Trochodendron aralioides HOM05D001070 ORTHO05D002096 2.6e-06 56.6 93 41.9
Oeu023335.1 Olea europaea HOM05D001070 ORTHO05D002096 3.4e-06 56.2 74 48.6
SGA_v2.0_scaffold140G35506 Striga asiatica HOM05D001070 ORTHO05D002096 3.4e-06 56.2 46 58.7
Nitab4.5_0004841g0070 Nicotiana tabacum HOM05D001070 ORTHO05D022991 5.7e-06 55.5 28 85.7
Sed0002593 Sechium edule HOM05D001070 ORTHO05D002096 7.5e-06 55.1 70 52.9
Sed0025207 Sechium edule HOM05D001070 ORTHO05D002096 7.5e-06 55.1 70 52.9


User provided reference genes

Program Settings