Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000172g2020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 4.4e-86 321.2 161 100.0
Nitab4.5_0000172g1940 Nicotiana tabacum HOM05D007533 ORTHO05D009622 6.9e-47 191.0 161 67.7
Nitab4.5_0010333g0120 Nicotiana tabacum HOM05D007533 ORTHO05D009622 4.8e-24 115.2 152 51.3
Nitab4.5_0012599g0080 Nicotiana tabacum HOM05D007533 ORTHO05D009622 3.4e-22 109.0 83 73.5
PGSC0003DMG400026520 Solanum tuberosum HOM05D007533 ORTHO05D009622 2.2e-21 106.3 83 72.3
Solyc00g500302.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 8.5e-21 104.4 83 72.3
Solyc11g063573.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 8.5e-21 104.4 83 72.3
Solyc00g500173.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 5.5e-20 101.7 83 71.1
PGSC0003DMG400030942 Solanum tuberosum HOM05D007533 ORTHO05D009622 9.4e-20 100.9 83 69.9
CAN.G2446.3 Capsicum annuum HOM05D007533 ORTHO05D009622 1.2e-19 100.5 83 71.1
CAN.G2792.1 Capsicum annuum HOM05D007533 ORTHO05D009622 1.2e-19 100.5 83 71.1
Sopen00g001050 Solanum pennellii HOM05D007533 ORTHO05D009622 2.7e-19 99.4 83 69.9
Nitab4.5_0010033g0020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 4.7e-19 98.6 83 69.9
Peaxi162Scf00651g00636 Petunia axillaris HOM05D007533 ORTHO05D009622 3.0e-18 95.9 83 67.5
CAN.G1001.31 Capsicum annuum HOM05D007533 ORTHO05D009622 2.6e-17 92.8 83 67.5
Nitab4.5_0010333g0060 Nicotiana tabacum HOM05D007533 ORTHO05D009622 2.6e-17 92.8 79 68.4
Nitab4.5_0000034g0140 Nicotiana tabacum HOM05D007533 ORTHO05D009622 2.4e-15 86.3 53 84.9
Glyma.17G185600 Glycine max HOM05D007533 ORTHO05D009622 3.1e-15 85.9 83 57.8
TPR.G21214 Trifolium pratense HOM05D007533 ORTHO05D009622 1.5e-14 83.6 83 57.8
Lalb_Chr00c21g0405841 Lupinus albus HOM05D007533 ORTHO05D009622 2.0e-14 83.2 83 57.8
Lalb_Chr00c24g0407011 Lupinus albus HOM05D007533 ORTHO05D009622 2.0e-14 83.2 83 57.8
LjContig00439g0010342 Lotus japonicus HOM05D007533 ORTHO05D009622 1.3e-13 80.5 83 56.6
LjContig00439g0021951 Lotus japonicus HOM05D007533 ORTHO05D009622 1.3e-13 80.5 83 56.6
Lj2P1223T74 Lonicera japonica HOM05D007533 ORTHO05D009622 1.9e-12 76.6 81 56.8
Lj2P1228T84 Lonicera japonica HOM05D007533 ORTHO05D009622 1.9e-12 76.6 81 56.8
Lj2P1231T101 Lonicera japonica HOM05D007533 ORTHO05D009622 1.9e-12 76.6 81 56.8
CANSAT16G0029 Cannabis sativa HOM05D007533 ORTHO05D009622 4.2e-12 75.5 83 55.4
Nn1g09978 Nelumbo nucifera HOM05D007533 ORTHO05D009622 9.4e-12 74.3 82 56.1
Nn1g10040 Nelumbo nucifera HOM05D007533 ORTHO05D009622 9.4e-12 74.3 82 56.1
DCAR_032459 Daucus carota HOM05D007533 ORTHO05D009622 1.2e-11 73.9 81 55.6
MSTRG.26054 Avicennia marina HOM05D007533 ORTHO05D009622 1.6e-11 73.6 83 54.2
ATMG00640 Arabidopsis thaliana HOM05D007533 ORTHO05D009622 2.7e-11 72.8 81 56.8
Ah.02g111570 Amaranthus hybridus HOM05D007533 ORTHO05D009622 4.7e-11 72.0 83 53.0
Ah.10g028150 Amaranthus hybridus HOM05D007533 ORTHO05D009622 4.7e-11 72.0 83 53.0
Gorai.001G167400 Gossypium raimondii HOM05D007533 ORTHO05D009622 6.1e-11 71.6 81 54.3
CARHR283000 Cardamine hirsuta HOM05D007533 ORTHO05D009622 8.0e-11 71.2 81 54.3
CsaV3_UNG210000 Cucumis sativus L. HOM05D007533 ORTHO05D009622 8.0e-11 71.2 83 54.2
Aqoxy1G02967 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 1.0e-10 70.9 82 53.7
Aqoxy23s008 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 1.0e-10 70.9 82 53.7
AL9U10720 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 1.0e-10 70.9 81 55.6
Thhalv10023156m.g Eutrema salsugineum HOM05D007533 ORTHO05D009622 1.0e-10 70.9 81 55.6
Hma1.2p1_0136F.1_g062009 Hydrangea macrophylla HOM05D007533 ORTHO05D009622 1.0e-10 70.9 81 54.3
Potri.007G061641 Populus trichocarpa HOM05D007533 ORTHO05D009622 1.4e-10 70.5 83 51.8
Potri.007G062602 Populus trichocarpa HOM05D007533 ORTHO05D009622 1.4e-10 70.5 83 51.8
SabraMtG0004200 Salix brachista HOM05D007533 ORTHO05D009622 1.4e-10 70.5 83 51.8
Lsat_1_v5_gn_0_35060 Lactuca sativa HOM05D007533 ORTHO05D009622 1.8e-10 70.1 81 54.3
C01p34790 Brassica napus HOM05D007533 ORTHO05D009622 2.3e-10 69.7 123 43.1
Sed0020832 Sechium edule HOM05D007533 ORTHO05D009622 2.3e-10 69.7 81 54.3
RcHm_v2.0_MTg0498351 Rosa chinensis HOM05D007533 ORTHO05D009622 3.9e-10 68.9 83 51.8
HanXRQChr09g0253411 Helianthus annuus HOM05D007533 ORTHO05D009622 6.7e-10 68.2 81 53.1
HanXRQChr16g0504431 Helianthus annuus HOM05D007533 ORTHO05D009622 8.8e-10 67.8 81 53.1
HanXRQChr17g0567331 Helianthus annuus HOM05D007533 ORTHO05D009622 8.8e-10 67.8 81 53.1
HanXRQMTg0579131 Helianthus annuus HOM05D007533 ORTHO05D009622 8.8e-10 67.8 81 53.1
AUR62042328 Chenopodium quinoa HOM05D007533 ORTHO05D009622 2.0e-09 66.6 99 46.5
A04p09330 Brassica napus HOM05D007533 ORTHO05D009622 2.6e-09 66.2 77 54.5
BolSC28t60309H Brassica oleracea HOM05D007533 ORTHO05D009622 2.6e-09 66.2 77 54.5
BolSC28t60365H Brassica oleracea HOM05D007533 ORTHO05D009622 2.6e-09 66.2 77 54.5
BraSC48t46232Z Brassica rapa HOM05D007533 ORTHO05D009622 2.6e-09 66.2 77 54.5
BraSC48t46320Z Brassica rapa HOM05D007533 ORTHO05D009622 2.6e-09 66.2 77 54.5
AL6G41410 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 9.7e-09 64.3 77 54.5
arahy.Tifrunner.gnm1.ann1.6ILC2A Arachis hypogaea HOM05D007533 ORTHO05D009622 1.3e-08 63.9 73 50.7
arahy.Tifrunner.gnm1.ann1.R8TWAM Arachis hypogaea HOM05D007533 ORTHO05D009622 1.3e-08 63.9 73 50.7
unitig_87.g27950 Utricularia gibba HOM05D007533 ORTHO05D009622 2.2e-08 63.2 89 48.3
MBI05_g05359_MAGBIO Magnolia biondii HOM05D007533 ORTHO05D009622 2.8e-08 62.8 73 52.1
Nitab4.5_0000172g1780 Nicotiana tabacum HOM05D008204 ORTHO05D010378 2.0e-06 56.6 38 76.3
QL12p027939 Quercus lobata HOM05D007533 ORTHO05D009622 4.5e-06 55.5 70 48.6
SHI19535 Sapria himalayana HOM05D000105 ORTHO05D000023 4.5e-06 55.5 76 47.4


User provided reference genes

Program Settings