Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000172g1190 Nicotiana tabacum HOM05D003430 ORTHO05D004809 4.6e-38 160.6 75 100.0
Nitab4.5_0000684g0110 Nicotiana tabacum HOM05D003430 ORTHO05D015169 1.0e-13 79.7 83 50.6
Peaxi162Scf00456g00036 Petunia axillaris HOM05D003430 ORTHO05D004809 3.4e-12 74.7 40 90.0
Peaxi162Scf00456g00037 Petunia axillaris HOM05D003430 ORTHO05D004809 3.4e-12 74.7 40 90.0
Solyc00g052430.2 Solanum lycopersicum HOM05D003430 ORTHO05D004809 3.4e-12 74.7 40 90.0
Solyc00g500224.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 3.4e-12 74.7 40 90.0
Solyc00g500241.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 3.4e-12 74.7 40 90.0
Gorai.001G162300 Gossypium raimondii HOM05D003430 ORTHO05D004809 9.7e-12 73.2 42 85.7
Aa31csc1081G20 Aethionema arabicum HOM05D003430 ORTHO05D004809 1.3e-11 72.8 40 87.5
ATMG00180 Arabidopsis thaliana HOM05D003430 ORTHO05D004809 1.3e-11 72.8 40 87.5
A04p09460 Brassica napus HOM05D003430 ORTHO05D004809 1.3e-11 72.8 40 87.5
BolSC28t60376H Brassica oleracea HOM05D003430 ORTHO05D004809 1.3e-11 72.8 40 87.5
BraSC177t45748Z Brassica rapa HOM05D003430 ORTHO05D004809 1.3e-11 72.8 40 87.5
BraSC48t46245Z Brassica rapa HOM05D003430 ORTHO05D004809 1.3e-11 72.8 40 87.5
BraSC54t46373Z Brassica rapa HOM05D003430 ORTHO05D004809 1.3e-11 72.8 40 87.5
CARHR282710 Cardamine hirsuta HOM05D003430 ORTHO05D004809 1.3e-11 72.8 40 87.5
CARHR288640 Cardamine hirsuta HOM05D003430 ORTHO05D004809 1.3e-11 72.8 40 87.5
Sp3g25660 Schrenkiella parvula HOM05D003430 ORTHO05D004809 1.3e-11 72.8 40 87.5
RcHm_v2.0_MTg0498431 Rosa chinensis HOM05D003430 ORTHO05D004809 1.7e-11 72.4 40 87.5
SabraMtG0000300 Salix brachista HOM05D003430 ORTHO05D004809 1.7e-11 72.4 40 87.5
SHI29635 Sapria himalayana HOM05D003430 ORTHO05D004809 1.7e-11 72.4 40 87.5
SHI42478 Sapria himalayana HOM05D003430 ORTHO05D004809 1.7e-11 72.4 57 66.7
SGA_v2.0_scaffold245G44667 Striga asiatica HOM05D003430 ORTHO05D004809 1.7e-11 72.4 40 87.5
unitig_87.g27923 Utricularia gibba HOM05D003430 ORTHO05D004809 1.7e-11 72.4 40 87.5
Gohir.D01G116901 Gossypium hirsutum HOM05D003430 ORTHO05D004809 2.8e-11 71.6 40 85.0
BraSC77t46628Z Brassica rapa HOM05D003430 ORTHO05D004809 3.7e-11 71.2 40 85.0
Cpa.g.c41010 Carica papaya HOM05D003430 ORTHO05D004809 6.3e-11 70.5 40 85.0
Dinv06724 Davidia involucrata HOM05D003430 ORTHO05D004809 6.3e-11 70.5 40 85.0
Ah.10g028080 Amaranthus hybridus HOM05D003430 ORTHO05D004809 1.1e-10 69.7 40 85.0
CANSAT16G0003 Cannabis sativa HOM05D003430 ORTHO05D004809 1.1e-10 69.7 40 85.0
Cfa023013 Carpinus fangiana HOM05D003430 ORTHO05D004809 1.1e-10 69.7 40 85.0
Lalb_Chr00c21g0406111 Lupinus albus HOM05D003430 ORTHO05D004809 1.1e-10 69.7 40 85.0
Lalb_Chr00c39g0409061 Lupinus albus HOM05D003430 ORTHO05D004809 1.1e-10 69.7 40 85.0
Lalb_Chr00c39g0409241 Lupinus albus HOM05D003430 ORTHO05D004809 1.1e-10 69.7 40 85.0
Lalb_Chr00c51g0413151 Lupinus albus HOM05D003430 ORTHO05D004809 1.1e-10 69.7 40 85.0
Nitab4.5_0001127g0210 Nicotiana tabacum HOM05D003430 ORTHO05D004809 1.4e-10 69.3 40 85.0
Lj2C1222T53 Lonicera japonica HOM05D003430 ORTHO05D004809 2.4e-10 68.6 42 81.0
Sc11g0004440 Simmondsia chinensis HOM05D003430 ORTHO05D004809 2.4e-10 68.6 40 82.5
arahy.Tifrunner.gnm1.ann1.ZQA7LX Arachis hypogaea HOM05D003430 ORTHO05D004809 4.1e-10 67.8 48 72.9
Lj2C1222T70 Lonicera japonica HOM05D003430 ORTHO05D004809 4.1e-10 67.8 40 82.5
arahy.Tifrunner.gnm1.ann1.13LUN9 Arachis hypogaea HOM05D003430 ORTHO05D004809 5.3e-10 67.4 40 82.5
arahy.Tifrunner.gnm1.ann1.2J3QCS Arachis hypogaea HOM05D003430 ORTHO05D004809 5.3e-10 67.4 40 82.5
arahy.Tifrunner.gnm1.ann1.4C4WEU Arachis hypogaea HOM05D003430 ORTHO05D004809 5.3e-10 67.4 40 82.5
arahy.Tifrunner.gnm1.ann1.Y9E1XU Arachis hypogaea HOM05D003430 ORTHO05D004809 5.3e-10 67.4 40 82.5
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 5.3e-10 67.4 40 82.5
LjContig00439g0009782 Lotus japonicus HOM05D003430 ORTHO05D004809 5.3e-10 67.4 40 82.5
Medtr0082s0260 Medicago truncatula HOM05D003430 ORTHO05D004809 5.3e-10 67.4 40 82.5
Nitab4.5_0003945g0010 Nicotiana tabacum HOM05D003430 ORTHO05D004809 5.3e-10 67.4 40 80.0
VMungo0044G0003 Vigna mungo HOM05D003430 ORTHO05D004809 5.3e-10 67.4 40 82.5
DCAR_032431 Daucus carota HOM05D003430 ORTHO05D004809 9.1e-10 66.6 40 80.0
Thhalv10002931m.g Eutrema salsugineum HOM05D003430 ORTHO05D004809 1.2e-09 66.2 36 86.1
Gorai.002G142200 Gossypium raimondii HOM05D003430 ORTHO05D004809 2.7e-09 65.1 37 81.1
Medtr0024s0150 Medicago truncatula HOM05D003430 ORTHO05D004809 4.5e-09 64.3 40 80.0
Lj6g0002337 Lotus japonicus HOM05D003430 ORTHO05D004809 5.9e-09 63.9 40 77.5
Ah.01g011780 Amaranthus hybridus HOM05D003430 ORTHO05D004809 7.7e-09 63.5 73 50.7
ECA039G0023 Erigeron canadensis HOM05D003430 ORTHO05D004809 1.3e-08 62.8 40 75.0
HanXRQChr00c0055g0571401 Helianthus annuus HOM05D003430 ORTHO05D004809 1.3e-08 62.8 40 75.0
HanXRQMTg0579531 Helianthus annuus HOM05D003430 ORTHO05D004809 1.3e-08 62.8 40 75.0
MBI05_g40995_MAGBIO Magnolia biondii HOM05D003430 ORTHO05D004809 1.7e-08 62.4 43 76.7
Aqoxy23s002 Aquilegia oxysepala HOM05D003430 ORTHO05D004809 8.5e-08 60.1 43 74.4
HanXRQChr11g0335431 Helianthus annuus HOM05D003430 ORTHO05D004809 1.1e-07 59.7 39 71.8
LjContig00446g0005008 Lotus japonicus HOM05D003430 ORTHO05D004809 1.6e-06 55.8 34 79.4
Zm00001eb435490 Zea mays HOM05D003430 ORTHO05D004809 1.6e-06 55.8 42 69.0
Zm00001eb436080 Zea mays HOM05D003430 ORTHO05D004809 1.6e-06 55.8 42 69.0
CDE02G3943 Ceratophyllum demersum HOM05D003430 ORTHO05D004809 6.1e-06 53.9 43 67.4
Nitab4.5_0001152g0350 Nicotiana tabacum HOM05D003430 ORTHO05D004809 6.1e-06 53.9 33 81.8
ATR0559G258 Amborella trichopoda HOM05D003430 ORTHO05D004809 8.0e-06 53.5 40 70.0


User provided reference genes

Program Settings