Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000172g0830 Nicotiana tabacum HOM05D002660 ORTHO05D011807 3.0e-78 295.0 144 100.0
Nitab4.5_0001796g0150 Nicotiana tabacum HOM05D002660 ORTHO05D011807 6.1e-55 217.6 147 76.2
Nitab4.5_0000172g1900 Nicotiana tabacum HOM05D002660 ORTHO05D011807 9.8e-53 210.3 150 74.0
Nitab4.5_0001788g0190 Nicotiana tabacum HOM05D002660 ORTHO05D011807 1.3e-52 209.9 140 77.9
Nitab4.5_0009709g0040 Nicotiana tabacum HOM05D002660 ORTHO05D011807 1.4e-51 206.5 115 85.2
Nitab4.5_0000592g0110 Nicotiana tabacum HOM05D002660 ORTHO05D011807 1.3e-44 183.3 131 76.3
Nitab4.5_0027526g0010 Nicotiana tabacum HOM05D002660 ORTHO05D011807 2.0e-37 159.5 124 71.0
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 1.9e-35 152.9 151 54.3
Nitab4.5_0026598g0010 Nicotiana tabacum HOM05D002660 ORTHO05D011807 1.1e-32 143.7 75 89.3
Nitab4.5_0000172g1410 Nicotiana tabacum HOM05D002660 ORTHO05D011807 1.4e-30 136.7 137 56.9
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 2.2e-28 129.4 129 56.6
Nitab4.5_0004300g0040 Nicotiana tabacum HOM05D002660 ORTHO05D011807 2.4e-27 125.9 77 83.1
Sed0016072 Sechium edule HOM05D002660 ORTHO05D003902 3.3e-24 115.5 149 45.0
Nitab4.5_0007225g0070 Nicotiana tabacum HOM05D002660 ORTHO05D011807 2.8e-23 112.5 54 90.7
Nitab4.5_0004300g0090 Nicotiana tabacum HOM05D002660 ORTHO05D011807 4.0e-22 108.6 58 81.0
Nitab4.5_0000172g2030 Nicotiana tabacum HOM05D002660 ORTHO05D011807 3.4e-21 105.5 105 60.0
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.4e-21 105.5 151 43.0
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.4e-21 105.5 151 43.0
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.4e-21 105.5 151 43.0
Nitab4.5_0002716g0050 Nicotiana tabacum HOM05D002660 ORTHO05D011807 3.8e-20 102.1 47 93.6
arahy.Tifrunner.gnm1.ann1.QE2SNE Arachis hypogaea HOM05D002660 ORTHO05D013121 2.7e-18 95.9 135 41.5
CAN.G505.14 Capsicum annuum HOM05D000743 ORTHO05D000580 2.3e-17 92.8 135 40.0
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 1.5e-16 90.1 125 38.4
Sopen11g018230 Solanum pennellii HOM05D002660 ORTHO05D003902 4.0e-14 82.0 60 65.0
Solyc00g142160.1 Solanum lycopersicum HOM05D002660 ORTHO05D011807 5.3e-14 81.6 89 55.1
CAN.G1001.30 Capsicum annuum HOM05D002660 ORTHO05D003902 1.2e-13 80.5 100 49.0
arahy.Tifrunner.gnm1.ann1.KE43QT Arachis hypogaea HOM05D002660 ORTHO05D007974 2.6e-13 79.3 146 38.4
arahy.Tifrunner.gnm1.ann1.QE4HQU Arachis hypogaea HOM05D002660 ORTHO05D007974 2.6e-13 79.3 146 38.4
CAN.G70.3 Capsicum annuum HOM05D002660 ORTHO05D003902 4.5e-13 78.6 98 52.0
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 4.9e-12 75.1 92 50.0
CAN.G1.6 Capsicum annuum HOM05D002660 ORTHO05D003902 8.4e-12 74.3 100 46.0
CAN.G1126.7 Capsicum annuum HOM05D002660 ORTHO05D011807 1.1e-11 73.9 103 48.5
CAN.G1159.14 Capsicum annuum HOM05D002660 ORTHO05D011807 1.1e-11 73.9 103 48.5
CAN.G200.4 Capsicum annuum HOM05D002660 ORTHO05D011807 1.1e-11 73.9 103 48.5
Solyc00g500104.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.1e-11 73.9 92 50.0
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.1e-11 73.9 92 50.0
PGSC0003DMG400023071 Solanum tuberosum HOM05D002660 ORTHO05D011807 4.2e-11 72.0 90 50.0
Dinv06709 Davidia involucrata HOM05D002660 ORTHO05D013121 1.2e-10 70.5 90 43.3
CAN.G134.22 Capsicum annuum HOM05D002660 ORTHO05D011807 2.1e-10 69.7 103 46.6
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 6.0e-10 68.2 107 44.9
Actinidia11788 Actinidia chinensis HOM05D002660 ORTHO05D013121 1.3e-09 67.0 80 43.8
Sc05g0004270 Simmondsia chinensis HOM05D002660 ORTHO05D011807 1.8e-09 66.6 67 49.3
CAN.G841.4 Capsicum annuum HOM05D002660 ORTHO05D003902 3.9e-09 65.5 80 51.2
Cfa023009 Carpinus fangiana HOM05D002660 ORTHO05D013121 5.1e-09 65.1 120 36.7
Lsat_1_v5_gn_8_93880 Lactuca sativa HOM05D002660 ORTHO05D013121 1.1e-08 63.9 115 37.4
Ca_08791_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 2.5e-08 62.8 107 36.4
Solyc09g056110.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.3e-08 62.4 92 44.6
COL.COLO4_04088 Corchorus olitorius HOM05D002660 ORTHO05D003902 4.3e-08 62.0 115 36.5
Medtr0212s0050 Medicago truncatula HOM05D002660 ORTHO05D003902 4.3e-08 62.0 107 36.4
Actinidia34821 Actinidia chinensis HOM05D002660 ORTHO05D013121 9.6e-08 60.8 67 40.3
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 8.1e-07 57.8 121 38.0
Lalb_Chr00c24g0406801 Lupinus albus HOM05D002660 ORTHO05D011807 3.1e-06 55.8 78 34.6
ATR0502G001 Amborella trichopoda HOM05D002660 ORTHO05D003902 9.0e-06 54.3 67 38.8
Solyc11g063540.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 9.0e-06 54.3 67 50.7


User provided reference genes

Program Settings