Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000172g0780 Nicotiana tabacum HOM05D008696 ORTHO05D010514 1.5e-29 132.1 65 100.0
Nitab4.5_0008578g0070 Nicotiana tabacum HOM05D008696 ORTHO05D002807 1.4e-11 72.4 47 80.9
Peaxi162Scf00489g00025 Petunia axillaris HOM05D008696 ORTHO05D002807 7.2e-11 70.1 47 78.7
Solyc00g094520.1 Solanum lycopersicum HOM05D008696 ORTHO05D010514 7.2e-11 70.1 47 78.7
PGSC0003DMG400005437 Solanum tuberosum HOM05D008696 ORTHO05D010514 7.2e-11 70.1 47 78.7
arahy.Tifrunner.gnm1.ann1.AT0FGT Arachis hypogaea HOM05D008696 ORTHO05D010514 1.6e-10 68.9 47 76.6
arahy.Tifrunner.gnm1.ann1.D6INMV Arachis hypogaea HOM05D008696 ORTHO05D010514 1.6e-10 68.9 47 76.6
arahy.Tifrunner.gnm1.ann1.FXV2QT Arachis hypogaea HOM05D008696 ORTHO05D010514 1.6e-10 68.9 47 76.6
arahy.Tifrunner.gnm1.ann1.P4RH3S Arachis hypogaea HOM05D008696 ORTHO05D010514 1.6e-10 68.9 47 76.6
SGA_v2.0_scaffold255G45330 Striga asiatica HOM05D008696 ORTHO05D002807 2.1e-10 68.6 44 79.5
Sp3g25810 Schrenkiella parvula HOM05D008696 ORTHO05D010514 6.1e-10 67.0 41 80.5
arahy.Tifrunner.gnm1.ann1.M5G7Z1 Arachis hypogaea HOM05D008696 ORTHO05D010514 7.9e-10 66.6 42 78.6
Nn1g10032 Nelumbo nucifera HOM05D008696 ORTHO05D010514 1.0e-09 66.2 40 82.5
Nn1g10035 Nelumbo nucifera HOM05D008696 ORTHO05D010514 1.0e-09 66.2 40 82.5
TPR.G36008 Trifolium pratense HOM05D008696 ORTHO05D010514 1.0e-09 66.2 40 82.5
PGSC0003DMG400040498 Solanum tuberosum HOM05D002965 ORTHO05D010514 1.8e-09 65.5 41 80.5
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 2.3e-09 65.1 40 80.0
Nitab4.5_0000886g0240 Nicotiana tabacum HOM05D008696 ORTHO05D010514 3.0e-09 64.7 46 71.7
Ca_03778_v3 Cicer arietinum L. HOM05D008696 ORTHO05D002807 3.9e-09 64.3 39 82.1
LjContig00315g0001623 Lotus japonicus HOM05D008696 ORTHO05D002807 3.9e-09 64.3 39 82.1
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 5.1e-09 63.9 42 76.2
Lsat_1_v5_gn_5_16440 Lactuca sativa HOM05D008696 ORTHO05D010514 6.7e-09 63.5 40 80.0
SHI37562 Sapria himalayana HOM05D008696 ORTHO05D010514 6.7e-09 63.5 40 80.0
Nitab4.5_0000307g0370 Nicotiana tabacum HOM05D008696 ORTHO05D010514 1.5e-08 62.4 47 72.3
arahy.Tifrunner.gnm1.ann1.QR678R Arachis hypogaea HOM05D008696 ORTHO05D010514 1.9e-08 62.0 39 79.5
arahy.Tifrunner.gnm1.ann1.Z6EYTT Arachis hypogaea HOM05D008696 ORTHO05D010514 2.5e-08 61.6 39 79.5
Nitab4.5_0004100g0100 Nicotiana tabacum HOM05D000533 ORTHO05D002807 3.3e-08 61.2 47 68.1
Sopen05g012710 Solanum pennellii HOM05D008696 ORTHO05D010514 9.7e-08 59.7 38 78.9
Nitab4.5_0007237g0040 Nicotiana tabacum HOM05D008696 ORTHO05D010514 2.8e-07 58.2 44 68.2
SHI36364 Sapria himalayana HOM05D012027 ORTHO05D010514 1.1e-06 56.2 39 71.8


User provided reference genes

Program Settings