Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000172g0230 Nicotiana tabacum HOM05D008598 ORTHO05D015416 2.4e-278 961.4 464 100.0
Nitab4.5_0000067g0270 Nicotiana tabacum HOM05D008598 ORTHO05D015416 4.2e-81 306.2 332 56.0
Nitab4.5_0000172g1100 Nicotiana tabacum HOM05D008598 ORTHO05D015416 9.1e-76 288.5 308 53.9
Nitab4.5_0000172g1510 Nicotiana tabacum HOM05D008598 ORTHO05D016200 4.6e-59 233.0 223 61.4
Nitab4.5_0013170g0010 Nicotiana tabacum HOM05D008598 ORTHO05D016200 3.7e-53 213.4 208 60.1
Nitab4.5_0014113g0010 Nicotiana tabacum HOM05D008598 ORTHO05D016200 1.6e-43 181.4 171 59.1
Solyc00g019980.2 Solanum lycopersicum HOM05D008598 ORTHO05D015416 1.2e-40 171.8 169 57.4
Nitab4.5_0001646g0020 Nicotiana tabacum HOM05D008598 ORTHO05D012806 3.4e-30 137.1 267 39.3
Nitab4.5_0000172g1830 Nicotiana tabacum HOM05D008598 ORTHO05D012806 6.4e-29 132.9 127 56.7
Solyc01g020460.3 Solanum lycopersicum HOM05D008598 ORTHO05D012806 6.4e-29 132.9 223 41.3
Nitab4.5_0004583g0130 Nicotiana tabacum HOM05D008598 ORTHO05D012806 3.2e-28 130.6 132 54.5
Nitab4.5_0001291g0060 Nicotiana tabacum HOM05D009475 ORTHO05D015290 8.7e-26 122.5 76 77.6
Nitab4.5_0001127g0270 Nicotiana tabacum HOM05D008598 ORTHO05D012806 1.5e-25 121.7 271 37.3
PGSC0003DMG400022373 Solanum tuberosum HOM05D000058 ORTHO05D000077 1.9e-25 121.3 64 87.5
Nitab4.5_0010559g0030 Nicotiana tabacum HOM05D008598 ORTHO05D015290 3.3e-25 120.6 70 82.9
Nitab4.5_0000067g0250 Nicotiana tabacum HOM05D008598 ORTHO05D015290 1.8e-23 114.8 70 82.9
Nitab4.5_0000275g0030 Nicotiana tabacum HOM05D008598 ORTHO05D015290 3.8e-21 107.1 70 78.6
Nitab4.5_0000062g0130 Nicotiana tabacum HOM05D008598 ORTHO05D016200 2.7e-19 100.9 80 68.8
Nitab4.5_0004743g0140 Nicotiana tabacum HOM05D008598 ORTHO05D016200 1.3e-18 98.6 80 67.5
Peaxi162Scf00017g00072 Petunia axillaris HOM05D008598 ORTHO05D012806 1.8e-18 98.2 158 42.4
Solyc00g019970.2 Solanum lycopersicum HOM05D008598 ORTHO05D016200 2.3e-18 97.8 64 79.7
Gorai.001G165200 Gossypium raimondii HOM05D016132 ORTHO05D015416 1.5e-17 95.1 53 81.1
Nitab4.5_0002225g0030 Nicotiana tabacum HOM05D008598 ORTHO05D015290 1.9e-17 94.7 55 83.6
Gohir.A06G126102 Gossypium hirsutum HOM05D016132 ORTHO05D015416 5.6e-17 93.2 49 85.7
TPR.G39292 Trifolium pratense HOM05D016132 ORTHO05D015416 2.1e-16 91.3 46 89.1
arahy.Tifrunner.gnm1.ann1.GUZV3Q Arachis hypogaea HOM05D016132 ORTHO05D015416 5.3e-15 86.7 50 78.0
arahy.Tifrunner.gnm1.ann1.HXG8XZ Arachis hypogaea HOM05D016132 ORTHO05D015416 5.3e-15 86.7 50 78.0
unitig_87.g28017 Utricularia gibba HOM05D016132 ORTHO05D015416 9.0e-15 85.9 44 86.4
Nitab4.5_0004583g0080 Nicotiana tabacum HOM05D008598 ORTHO05D015290 1.5e-14 85.1 45 88.9
Nitab4.5_0003481g0050 Nicotiana tabacum HOM05D016132 ORTHO05D015416 4.5e-14 83.6 57 73.7
arahy.Tifrunner.gnm1.ann1.RI63GH Arachis hypogaea HOM05D016132 ORTHO05D015416 1.7e-13 81.6 41 82.9
Solyc00g019990.1 Solanum lycopersicum HOM05D008598 ORTHO05D015290 3.8e-13 80.5 72 62.5
PGSC0003DMG400031309 Solanum tuberosum HOM05D008598 ORTHO05D015290 3.8e-13 80.5 72 62.5
Nitab4.5_0000275g0040 Nicotiana tabacum HOM05D008598 ORTHO05D283625 5.5e-12 76.6 59 69.5
Nitab4.5_0001152g0220 Nicotiana tabacum HOM05D008598 ORTHO05D012806 9.3e-12 75.9 38 86.8
Solyc01g020450.1 Solanum lycopersicum HOM05D008598 ORTHO05D015290 1.6e-11 75.1 72 59.7
Nitab4.5_0001152g0160 Nicotiana tabacum HOM05D008598 ORTHO05D012806 6.0e-11 73.2 114 42.1
Nitab4.5_0000172g1060 Nicotiana tabacum HOM05D008598 ORTHO05D015290 1.3e-10 72.0 41 85.4
Nitab4.5_0001152g0170 Nicotiana tabacum HOM05D008598 ORTHO05D016200 3.0e-10 70.9 143 39.9
Psat1g120800 Pisum sativum HOM05D015895 ORTHO05D017762 1.1e-09 68.9 33 90.9
Medtr7g021740 Medicago truncatula HOM05D001750 ORTHO05D001825 9.6e-09 65.9 55 58.2
Medtr4g051300 Medicago truncatula HOM05D001750 ORTHO05D001825 2.8e-08 64.3 32 84.4
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.2e-06 58.9 50 62.0


User provided reference genes

Program Settings