Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000172g0130 Nicotiana tabacum HOM05D008194 ORTHO05D010811 4.8e-120 434.5 216 100.0
Nitab4.5_0000055g0320 Nicotiana tabacum HOM05D008194 ORTHO05D010811 4.1e-47 192.2 132 75.0
Peaxi162Scf00286g00017 Petunia axillaris HOM05D008194 ORTHO05D010811 1.5e-44 183.7 246 48.4
arahy.Tifrunner.gnm1.ann1.C43PR6 Arachis hypogaea HOM05D008194 ORTHO05D010811 3.8e-40 169.1 96 85.4
Nitab4.5_0008300g0050 Nicotiana tabacum HOM05D008194 ORTHO05D010811 1.9e-39 166.8 132 66.7
Solyc00g244290.1 Solanum lycopersicum HOM05D008194 ORTHO05D010811 1.6e-38 163.7 89 89.9
Solyc00g500316.1 Solanum lycopersicum HOM05D008194 ORTHO05D010811 1.6e-38 163.7 89 89.9
Sopen00g013510 Solanum pennellii HOM05D008194 ORTHO05D010811 3.1e-34 149.4 84 88.1
Nitab4.5_0000172g1790 Nicotiana tabacum HOM05D008194 ORTHO05D010811 2.1e-30 136.7 86 76.7
CsaV3_UNG208120 Cucumis sativus L. HOM05D008194 ORTHO05D010811 1.0e-29 134.4 172 48.3
arahy.Tifrunner.gnm1.ann1.6G4HZT Arachis hypogaea HOM05D008194 ORTHO05D010811 2.5e-28 129.8 76 84.2
Peaxi162Scf00373g00823 Petunia axillaris HOM05D008194 ORTHO05D010811 5.6e-28 128.6 172 47.1
Nitab4.5_0008300g0040 Nicotiana tabacum HOM05D008194 ORTHO05D010811 8.1e-27 124.8 152 48.0
Peaxi162Scf00040g01212 Petunia axillaris HOM05D008194 ORTHO05D010811 3.1e-26 122.9 80 80.0
Nitab4.5_0000172g1630 Nicotiana tabacum HOM05D008194 ORTHO05D010811 5.3e-26 122.1 132 54.5
Nitab4.5_0000172g1570 Nicotiana tabacum HOM05D008194 ORTHO05D010811 5.8e-25 118.6 68 86.8
Oeu025165.1 Olea europaea HOM05D008194 ORTHO05D010811 8.4e-24 114.8 72 80.6
arahy.Tifrunner.gnm1.ann1.L892YY Arachis hypogaea HOM05D008194 ORTHO05D010811 2.4e-23 113.2 68 82.4
Thhalv10015951m.g Eutrema salsugineum HOM05D006493 ORTHO05D009864 1.0e-21 107.8 67 80.6
GSVIVG01007203001 Vitis vinifera HOM05D006493 ORTHO05D009864 1.9e-20 103.6 124 53.2
Hma1.2p1_0580F.1_g182760 Hydrangea macrophylla HOM05D008194 ORTHO05D010811 1.1e-18 97.8 57 86.0
Lsat_1_v5_gn_0_38140 Lactuca sativa HOM05D008194 ORTHO05D010811 1.1e-18 97.8 57 86.0
RcHm_v2.0_MTg0498491 Rosa chinensis HOM05D008194 ORTHO05D010811 5.3e-18 95.5 57 84.2
LjContig00439g0001200 Lotus japonicus HOM05D008194 ORTHO05D010811 9.0e-18 94.7 57 84.2
LjContig00439g0021834 Lotus japonicus HOM05D008194 ORTHO05D010811 9.0e-18 94.7 57 84.2
CDE02G4414 Ceratophyllum demersum HOM05D006493 ORTHO05D009864 1.3e-16 90.9 57 80.7
Medtr2g010910 Medicago truncatula HOM05D008194 ORTHO05D010811 1.7e-16 90.5 56 76.8
SHI34940 Sapria himalayana HOM05D008194 ORTHO05D010811 1.7e-16 90.5 155 42.6
Lalb_Chr10g0094521 Lupinus albus HOM05D008194 ORTHO05D010811 2.2e-16 90.1 57 78.9
PGR069G0009 Punica granatum HOM05D006493 ORTHO05D009864 1.1e-15 87.8 51 86.3
Nn1g10151 Nelumbo nucifera HOM05D006493 ORTHO05D009864 1.9e-15 87.0 51 86.3
Potri.007G062542 Populus trichocarpa HOM05D008194 ORTHO05D010811 1.9e-15 87.0 57 80.7
Glyma.01G136800 Glycine max HOM05D008194 ORTHO05D010811 1.3e-13 80.9 55 72.7
Mapoly0157s0028 Marchantia polymorpha HOM05D008466 ORTHO05D010817 3.0e-13 79.7 58 72.4
Aa31csc239G70 Aethionema arabicum HOM05D008194 ORTHO05D010811 6.7e-13 78.6 48 83.3
Nitab4.5_0000593g0190 Nicotiana tabacum HOM05D006493 ORTHO05D009864 1.1e-12 77.8 187 33.2
Solyc00g244300.1 Solanum lycopersicum HOM05D013629 ORTHO05D010811 1.9e-12 77.0 79 53.2
RhsimMtG0006700 Rhododendron simsii HOM05D006493 ORTHO05D009864 2.5e-12 76.6 79 53.2
CDE02G1049 Ceratophyllum demersum HOM05D013629 ORTHO05D010811 1.6e-11 73.9 86 48.8
HanXRQChr07g0188931 Helianthus annuus HOM05D006493 ORTHO05D009864 1.6e-11 73.9 47 78.7
SalBow1G2520 Salvia bowleyana HOM05D006493 ORTHO05D009864 2.8e-11 73.2 58 67.2
AUR62043874 Chenopodium quinoa HOM05D013629 ORTHO05D010811 6.3e-11 72.0 58 63.8
RcHm_v2.0_MTg0498501 Rosa chinensis HOM05D013629 ORTHO05D010811 8.2e-11 71.6 58 67.2
Solyc03g063510.1 Solanum lycopersicum HOM05D008194 ORTHO05D010811 8.2e-11 71.6 37 91.9
arahy.Tifrunner.gnm1.ann1.11DZ0Y Arachis hypogaea HOM05D013629 ORTHO05D010811 1.1e-10 71.2 58 67.2
arahy.Tifrunner.gnm1.ann1.9YHY30 Arachis hypogaea HOM05D013629 ORTHO05D010811 1.1e-10 71.2 58 67.2
Nitab4.5_0000028g0270 Nicotiana tabacum HOM05D008194 ORTHO05D020893 7.6e-09 65.1 56 62.5
Nitab4.5_0000172g1580 Nicotiana tabacum HOM05D008194 ORTHO05D013683 7.6e-09 65.1 34 91.2
Solyc00g500315.1 Solanum lycopersicum HOM05D008194 ORTHO05D013683 1.4e-07 60.8 34 85.3
Nitab4.5_0000172g1560 Nicotiana tabacum HOM05D008194 ORTHO05D013683 1.6e-06 57.4 122 39.3


User provided reference genes

Program Settings