Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000172g0120 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.8e-136 489.2 241 100.0
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 6.6e-70 268.1 325 52.0
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 6.6e-70 268.1 325 52.0
Medtr0082s0090 Medicago truncatula HOM05D003666 ORTHO05D004770 5.4e-64 248.4 335 49.0
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 6.2e-60 235.0 224 61.6
Aa31csc553G70 Aethionema arabicum HOM05D003666 ORTHO05D004770 2.4e-59 233.0 251 57.4
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 2.9e-57 226.1 224 60.7
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 4.2e-56 222.2 224 60.3
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 4.5e-50 202.2 224 56.7
Gorai.001G166300 Gossypium raimondii HOM05D003666 ORTHO05D004770 4.5e-50 202.2 367 41.7
Nitab4.5_0006007g0010 Nicotiana tabacum HOM05D003666 ORTHO05D004770 4.3e-45 185.7 111 86.5
Solyc00g500172.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 4.3e-45 185.7 111 86.5
Solyc00g500189.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 4.3e-45 185.7 111 86.5
Solyc00g500253.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 4.3e-45 185.7 111 86.5
CANSAT16G0036 Cannabis sativa HOM05D003666 ORTHO05D004770 1.3e-44 184.1 224 52.2
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 1.1e-43 181.0 224 51.3
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 3.1e-43 179.5 224 52.2
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 5.3e-43 178.7 224 52.2
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 2.0e-42 176.8 224 52.2
Ah.10g028200 Amaranthus hybridus HOM05D003666 ORTHO05D004770 4.5e-42 175.6 111 82.9
Ah.10g028750 Amaranthus hybridus HOM05D003666 ORTHO05D004770 4.5e-42 175.6 111 82.9
Lj2C1223T18 Lonicera japonica HOM05D003666 ORTHO05D004770 5.0e-41 172.2 111 82.0
Lsat_1_v5_gn_8_46780 Lactuca sativa HOM05D003666 ORTHO05D004770 3.2e-40 169.5 111 81.1
RcHm_v2.0_MTg0498711 Rosa chinensis HOM05D003666 ORTHO05D004770 3.2e-40 169.5 111 81.1
BcaC05g26880 Brassica carinata HOM05D003666 ORTHO05D004770 1.2e-39 167.5 132 70.5
BNapus_Darmor_BZH_scaffold_234p00230 Brassica napus HOM05D003666 ORTHO05D004770 1.2e-39 167.5 132 70.5
BcaC05g26875 Brassica carinata HOM05D003666 ORTHO05D004770 1.6e-39 167.2 110 80.9
BraSC48t46269Z Brassica rapa HOM05D003666 ORTHO05D004770 2.1e-39 166.8 224 49.6
Lalb_Chr00c24g0407401 Lupinus albus HOM05D003666 ORTHO05D004770 2.7e-39 166.4 111 79.3
Aqoxy12s018 Aquilegia oxysepala HOM05D003666 ORTHO05D004770 4.6e-39 165.6 111 78.4
TAR626G1001 Trochodendron aralioides HOM05D003666 ORTHO05D004770 7.9e-39 164.9 111 78.4
Potri.007G061861 Populus trichocarpa HOM05D003666 ORTHO05D004770 1.3e-38 164.1 111 79.3
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 1.8e-38 163.7 111 78.4
TPR.G36115 Trifolium pratense HOM05D003666 ORTHO05D004770 3.0e-38 162.9 111 78.4
CDE02G1260 Ceratophyllum demersum HOM05D003666 ORTHO05D004770 1.5e-37 160.6 109 79.8
CARHR288310 Cardamine hirsuta HOM05D003666 ORTHO05D004770 7.7e-34 148.3 96 81.2
Glyma.10G098500 Glycine max HOM05D003666 ORTHO05D004770 1.0e-33 147.9 111 71.2
Solyc10g061990.3 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.2e-31 141.0 110 69.1
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 4.6e-31 139.0 242 43.4
arahy.Tifrunner.gnm1.ann1.U43JHG Arachis hypogaea HOM05D003666 ORTHO05D004770 2.8e-28 129.8 111 66.7
arahy.Tifrunner.gnm1.ann1.WXF1XT Arachis hypogaea HOM05D003666 ORTHO05D004770 2.8e-28 129.8 111 66.7
Thhalv10015926m.g Eutrema salsugineum HOM05D003666 ORTHO05D004770 9.1e-27 124.8 121 61.2
Lalb_Chr00c54g0413611 Lupinus albus HOM05D003666 ORTHO05D004770 5.9e-26 122.1 111 64.0
Lj2A1228G70 Lonicera japonica HOM05D003666 ORTHO05D004770 2.5e-24 116.7 241 39.8
Nitab4.5_0000172g1340 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.0e-17 94.7 226 37.6
Cfa023044 Carpinus fangiana HOM05D003666 ORTHO05D004770 1.9e-16 90.5 65 78.5
Nitab4.5_0010687g0040 Nicotiana tabacum HOM05D003666 ORTHO05D031556 3.2e-16 89.7 71 69.0
Lj2A1223T77 Lonicera japonica HOM05D003666 ORTHO05D004770 5.5e-16 89.0 56 80.4
SabraMtG0002200 Salix brachista HOM05D003666 ORTHO05D004770 5.5e-16 89.0 56 80.4
arahy.Tifrunner.gnm1.ann1.75QRLF Arachis hypogaea HOM05D003666 ORTHO05D004770 1.2e-15 87.8 56 78.6
arahy.Tifrunner.gnm1.ann1.ZBC6LT Arachis hypogaea HOM05D003666 ORTHO05D004770 1.2e-15 87.8 56 78.6
BolC4t23491H Brassica oleracea HOM05D003666 ORTHO05D004770 3.3e-13 79.7 149 41.6
C04p19570 Brassica napus HOM05D003666 ORTHO05D004770 4.4e-13 79.3 149 41.6
Solyc10g045750.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 8.2e-12 75.1 89 55.1
SEGI_23011 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 3.5e-10 69.7 53 58.5
Ca_14829_v3 Cicer arietinum L. HOM05D003666 ORTHO05D004770 1.7e-09 67.4 51 72.5
Nitab4.5_0001291g0020 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.1e-08 64.7 41 85.4
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 3.2e-08 63.2 147 36.1
Dinv06695 Davidia involucrata HOM05D003666 ORTHO05D004770 3.2e-08 63.2 46 76.1
arahy.Tifrunner.gnm1.ann1.AQ5GJP Arachis hypogaea HOM05D003666 ORTHO05D004770 2.1e-07 60.5 47 70.2
BolSC28t60439H Brassica oleracea HOM05D003666 ORTHO05D004770 3.6e-07 59.7 36 83.3
TPR.G32909 Trifolium pratense HOM05D003666 ORTHO05D004770 1.0e-06 58.2 39 71.8
TAR626G0763 Trochodendron aralioides HOM05D013135 ORTHO05D031556 3.0e-06 56.6 36 75.0
BolSC28t60438H Brassica oleracea HOM05D003666 ORTHO05D004770 4.0e-06 56.2 35 77.1
Lsat_1_v5_gn_3_105380 Lactuca sativa HOM05D003666 ORTHO05D004770 6.8e-06 55.5 36 80.6
SalBow1G6983 Salvia bowleyana HOM05D003666 ORTHO05D004770 8.8e-06 55.1 64 51.6
SHI15675 Sapria himalayana HOM05D003666 ORTHO05D004770 8.8e-06 55.1 65 56.9


User provided reference genes

Program Settings