Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000171g0010 Nicotiana tabacum HOM05D004173 ORTHO05D004885 3.7e-134 481.5 235 100.0
Peaxi162Scf00739g00036 Petunia axillaris HOM05D004173 ORTHO05D004885 4.3e-74 282.0 187 78.1
Peaxi162Scf00739g00035 Petunia axillaris HOM05D004173 ORTHO05D004885 9.6e-74 280.8 189 78.3
CAN.G24.14 Capsicum annuum HOM05D004173 ORTHO05D004885 4.8e-73 278.5 194 74.2
CAN.G100.76 Capsicum annuum HOM05D004173 ORTHO05D004885 1.8e-72 276.6 195 75.4
PGSC0003DMG400016638 Solanum tuberosum HOM05D004173 ORTHO05D004885 5.9e-71 271.6 196 74.5
Sopen06g015380 Solanum pennellii HOM05D004173 ORTHO05D004885 9.3e-69 264.2 194 73.2
Solyc06g049020.1 Solanum lycopersicum HOM05D004173 ORTHO05D004885 2.1e-68 263.1 194 72.7
Nitab4.5_0002846g0010 Nicotiana tabacum HOM05D004173 ORTHO05D004885 8.8e-59 231.1 168 76.8
Oeu063983.1 Olea europaea HOM05D004173 ORTHO05D004885 8.8e-59 231.1 179 59.8
Nitab4.5_0002279g0040 Nicotiana tabacum HOM05D004173 ORTHO05D004885 1.1e-58 230.7 192 63.0
CAN.G203.54 Capsicum annuum HOM05D004173 ORTHO05D004885 9.4e-53 211.1 191 59.7
PGSC0003DMG400011642 Solanum tuberosum HOM05D004173 ORTHO05D004885 1.0e-51 207.6 195 56.9
Migut.F00606 Erythranthe guttata HOM05D004173 ORTHO05D004885 1.2e-47 194.1 206 51.9
Peaxi162Scf00167g01213 Petunia axillaris HOM05D004173 ORTHO05D004885 2.0e-47 193.4 147 66.7
Lalb_Chr23g0272221 Lupinus albus HOM05D004173 ORTHO05D004885 1.0e-46 191.0 193 52.3
SalBow3G3840 Salvia bowleyana HOM05D004173 ORTHO05D004885 2.2e-46 189.9 155 60.0
Dinv34482 Davidia involucrata HOM05D004173 ORTHO05D004885 5.0e-46 188.7 165 56.4
Sopen05g030770 Solanum pennellii HOM05D004173 ORTHO05D004885 1.9e-45 186.8 203 53.2
CSS0045557 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 3.2e-45 186.0 226 46.0
Potri.019G058000 Populus trichocarpa HOM05D004173 ORTHO05D004885 2.1e-44 183.3 192 50.0
Thecc.10G181100 Theobroma cacao HOM05D004173 ORTHO05D004885 2.1e-44 183.3 227 43.6
TPR.G1732 Trifolium pratense HOM05D004173 ORTHO05D004885 3.6e-44 182.6 154 59.1
Ciclev10032642m.g Citrus clementina HOM05D004173 ORTHO05D004885 1.0e-43 181.0 213 43.2
RcHm_v2.0_Chr1g0372231 Rosa chinensis HOM05D004173 ORTHO05D004885 1.4e-43 180.6 202 48.5
Hma1.2p1_0264F.1_g106180 Hydrangea macrophylla HOM05D004173 ORTHO05D004885 1.8e-43 180.3 165 54.5
Manes.10G001300 Manihot esculenta HOM05D004173 ORTHO05D004885 8.8e-43 177.9 164 54.9
Rhsim09G0185800 Rhododendron simsii HOM05D004173 ORTHO05D004885 2.0e-42 176.8 200 47.5
vmacro09960 Vaccinium macrocarpon HOM05D004173 ORTHO05D004885 2.6e-42 176.4 188 46.8
Duzib114G0418 Durio zibethinus HOM05D004173 ORTHO05D004885 4.4e-42 175.6 190 46.8
arahy.Tifrunner.gnm1.ann1.7F477P Arachis hypogaea HOM05D004173 ORTHO05D004885 9.7e-42 174.5 198 48.5
Lalb_Chr23g0272201 Lupinus albus HOM05D004173 ORTHO05D004885 3.7e-41 172.6 190 49.5
Psat5g068840 Pisum sativum HOM05D004173 ORTHO05D004885 3.7e-41 172.6 171 55.6
SGA_v2.0_scaffold60G20889 Striga asiatica HOM05D004173 ORTHO05D004885 3.7e-41 172.6 166 51.2
Actinidia00999 Actinidia chinensis HOM05D004173 ORTHO05D004885 4.8e-41 172.2 199 46.2
Medtr3g093970 Medicago truncatula HOM05D004173 ORTHO05D004885 4.8e-41 172.2 186 49.5
Atru.chr12.182 Acer truncatum HOM05D004173 ORTHO05D004885 8.2e-41 171.4 201 47.3
FvH4_7g25910 Fragaria vesca HOM05D004173 ORTHO05D004885 1.1e-40 171.0 222 42.8
FAN06G1323 Fragaria x ananassa HOM05D004173 ORTHO05D004885 1.1e-40 171.0 222 42.8
Sed0028126 Sechium edule HOM05D004173 ORTHO05D004885 1.1e-40 171.0 170 52.9
Cpa.g.sc19.59 Carica papaya HOM05D004173 ORTHO05D004885 1.4e-40 170.6 230 43.9
Phvul.009G044100 Phaseolus vulgaris HOM05D004173 ORTHO05D004885 1.8e-40 170.2 189 49.7
FAN10G3668 Fragaria x ananassa HOM05D004173 ORTHO05D004885 2.4e-40 169.9 214 44.9
MD01G1167600 Malus domestica HOM05D004173 ORTHO05D004885 2.4e-40 169.9 159 54.1
TWI73G0681 Tripterygium wilfordii HOM05D004173 ORTHO05D004885 2.4e-40 169.9 173 50.9
Glyma.06G142900 Glycine max HOM05D004173 ORTHO05D004885 3.1e-40 169.5 154 54.5
Manes.07G143600 Manihot esculenta HOM05D004173 ORTHO05D004885 3.1e-40 169.5 158 53.8
Ca_16866_v3 Cicer arietinum L. HOM05D004173 ORTHO05D004885 4.1e-40 169.1 167 52.1
Ca_29953_v3 Cicer arietinum L. HOM05D004173 ORTHO05D004885 4.1e-40 169.1 167 52.1
Prupe.2G264000 Prunus persica HOM05D004173 ORTHO05D004885 9.1e-40 167.9 191 48.7
C09p71450 Brassica napus HOM05D004173 ORTHO05D004885 1.2e-39 167.5 169 50.9
BolC9t59908H Brassica oleracea HOM05D004173 ORTHO05D004885 1.2e-39 167.5 169 50.9
FAN03G3439 Fragaria x ananassa HOM05D004173 ORTHO05D004885 2.0e-39 166.8 181 50.3
Sp6g37580 Schrenkiella parvula HOM05D004173 ORTHO05D004885 2.0e-39 166.8 182 49.5
A10p30940 Brassica napus HOM05D004173 ORTHO05D004885 2.7e-39 166.4 169 50.3
BraA10t45139Z Brassica rapa HOM05D004173 ORTHO05D004885 2.7e-39 166.4 169 50.3
Duzib128G1795 Durio zibethinus HOM05D004173 ORTHO05D004885 2.7e-39 166.4 155 52.3
Glyma.04G222500 Glycine max HOM05D004173 ORTHO05D004885 4.5e-39 165.6 154 54.5
Manes.07G141000 Manihot esculenta HOM05D004173 ORTHO05D004885 4.5e-39 165.6 158 53.2
Sc10g0002990 Simmondsia chinensis HOM05D004173 ORTHO05D004885 4.5e-39 165.6 153 52.3
MD07G1233600 Malus domestica HOM05D004173 ORTHO05D004885 7.7e-39 164.9 160 52.5
Ah.12g064380 Amaranthus hybridus HOM05D004173 ORTHO05D004885 1.0e-38 164.5 154 53.2
VMungo1309G0457 Vigna mungo HOM05D004173 ORTHO05D004885 1.0e-38 164.5 156 53.8
THA.LOC104803208 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 1.3e-38 164.1 157 47.8
CsaV3_6G002310 Cucumis sativus L. HOM05D004173 ORTHO05D004885 2.9e-38 162.9 170 47.6
CARHR207980 Cardamine hirsuta HOM05D004173 ORTHO05D004885 3.8e-38 162.5 168 50.0
THA.LOC104824365 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 3.8e-38 162.5 203 41.9
Cfa001210 Carpinus fangiana HOM05D004173 ORTHO05D004885 1.9e-37 160.2 190 48.9
THA.LOC104813511 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 4.2e-37 159.1 170 45.9
AUR62024933 Chenopodium quinoa HOM05D004173 ORTHO05D004885 5.5e-37 158.7 154 51.3
BcaC07g39948 Brassica carinata HOM05D004173 ORTHO05D004885 7.2e-37 158.3 192 41.1
C08p31680 Brassica napus HOM05D004173 ORTHO05D004885 7.2e-37 158.3 192 41.1
AL6G15090 Arabidopsis lyrata HOM05D004173 ORTHO05D004885 9.4e-37 157.9 186 47.3
Lj1g0005357 Lotus japonicus HOM05D004173 ORTHO05D004885 9.4e-37 157.9 168 49.4
CiPaw.01G306500 Carya illinoinensis HOM05D004173 ORTHO05D004885 1.2e-36 157.5 151 54.3
BolC8t50789H Brassica oleracea HOM05D004173 ORTHO05D004885 2.7e-36 156.4 192 40.6
MELO3C020007.2 Cucumis melo HOM05D004173 ORTHO05D004885 2.7e-36 156.4 165 47.9
Sp5g06150 Schrenkiella parvula HOM05D004173 ORTHO05D004885 3.6e-36 156.0 175 41.1
CANSAT25G2618 Cannabis sativa HOM05D004173 ORTHO05D004885 4.7e-36 155.6 162 49.4
Gohir.A05G278500 Gossypium hirsutum HOM05D004173 ORTHO05D004885 6.1e-36 155.2 175 47.4
Gohir.D05G280200 Gossypium hirsutum HOM05D004173 ORTHO05D004885 8.0e-36 154.8 175 47.4
Thhalv10014558m.g Eutrema salsugineum HOM05D004173 ORTHO05D004885 1.0e-35 154.5 201 43.3
AT5G05250 Arabidopsis thaliana HOM05D004173 ORTHO05D004885 1.4e-35 154.1 182 46.7
Thhalv10006215m.g Eutrema salsugineum HOM05D004173 ORTHO05D004885 1.8e-35 153.7 166 41.6
AL5G37690 Arabidopsis lyrata HOM05D004173 ORTHO05D004885 2.3e-35 153.3 192 40.1
A09p49310 Brassica napus HOM05D004173 ORTHO05D004885 5.2e-35 152.1 165 41.8
BraA09t40385Z Brassica rapa HOM05D004173 ORTHO05D004885 5.2e-35 152.1 165 41.8
Gorai.009G293700 Gossypium raimondii HOM05D004173 ORTHO05D004885 6.8e-35 151.8 175 48.0
CARHR166510 Cardamine hirsuta HOM05D004173 ORTHO05D004885 1.2e-34 151.0 174 40.2
Carub.0006s0418 Capsella rubella HOM05D004173 ORTHO05D004885 2.6e-34 149.8 182 44.0
BcaC07g39950 Brassica carinata HOM05D004173 ORTHO05D004885 5.7e-34 148.7 171 44.4
Eucgr.J00114 Eucalyptus grandis HOM05D004173 ORTHO05D004885 9.8e-34 147.9 178 42.7
Haze_17356 Corylus avellana HOM05D004173 ORTHO05D004885 1.7e-33 147.1 216 42.1
Aa31LG10G11250 Aethionema arabicum HOM05D004173 ORTHO05D004885 3.7e-33 146.0 175 41.1
Carub.0005s2314 Capsella rubella HOM05D004173 ORTHO05D004885 3.7e-33 146.0 173 39.9
unitig_37.g11910 Utricularia gibba HOM05D004173 ORTHO05D004885 1.8e-32 143.7 191 40.8
Aa31LG11G6110 Aethionema arabicum HOM05D004173 ORTHO05D004885 4.1e-32 142.5 174 44.3
AT3G56360 Arabidopsis thaliana HOM05D004173 ORTHO05D004885 9.1e-32 141.4 192 38.5
AUR62030611 Chenopodium quinoa HOM05D004173 ORTHO05D004885 9.1e-32 141.4 162 47.5
BcaC02g09832 Brassica carinata HOM05D004173 ORTHO05D004885 1.2e-31 141.0 165 38.2
BcaC06g32235 Brassica carinata HOM05D004173 ORTHO05D004885 1.2e-31 141.0 196 41.8
C04p36060 Brassica napus HOM05D004173 ORTHO05D004885 1.2e-31 141.0 165 38.2
MBI18_g38876_MAGBIO Magnolia biondii HOM05D004173 ORTHO05D004885 2.0e-31 140.2 156 43.6
BolC4t25192H Brassica oleracea HOM05D004173 ORTHO05D004885 2.7e-31 139.8 165 37.6
QL08p064831 Quercus lobata HOM05D004173 ORTHO05D004885 4.5e-31 139.0 189 42.3
DCAR_014665 Daucus carota HOM05D004173 ORTHO05D004885 1.3e-30 137.5 182 43.4
Lsat_1_v5_gn_8_11461 Lactuca sativa HOM05D004173 ORTHO05D004885 3.8e-30 136.0 169 48.5
THA.LOC104826832 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 3.8e-30 136.0 169 44.4
A04p03290 Brassica napus HOM05D004173 ORTHO05D004885 5.0e-30 135.6 227 33.9
Cc10_g16360 Coffea canephora HOM05D004173 ORTHO05D004885 5.0e-30 135.6 207 40.6
BraA04t16106Z Brassica rapa HOM05D004173 ORTHO05D004885 1.1e-29 134.4 167 37.7
PGR044G2104 Punica granatum HOM05D004173 ORTHO05D004885 1.1e-29 134.4 211 39.3
BcaB02g08372 Brassica carinata HOM05D004173 ORTHO05D004885 1.5e-29 134.0 174 37.4
Oeu025786.2 Olea europaea HOM05D004173 ORTHO05D004885 1.9e-29 133.7 199 40.2
PSO675G3687 Papaver somniferum HOM05D004173 ORTHO05D004885 1.2e-28 131.0 188 40.4
PSO104G0082 Papaver somniferum HOM05D004173 ORTHO05D004885 1.6e-28 130.6 193 40.9
ClCG11G005670 Citrullus lanatus HOM05D004173 ORTHO05D004885 2.1e-28 130.2 149 50.3
Nn5g26849 Nelumbo nucifera HOM05D004173 ORTHO05D004885 2.1e-28 130.2 176 39.2
CSS0041127 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 6.1e-28 128.6 192 38.5
CSS0049649 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 6.1e-28 128.6 192 38.5
Gorai.013G006900 Gossypium raimondii HOM05D004173 ORTHO05D004885 6.1e-28 128.6 197 40.1
Lsat_1_v5_gn_9_60020 Lactuca sativa HOM05D004173 ORTHO05D004885 8.0e-28 128.3 158 46.8
Nn2g10306 Nelumbo nucifera HOM05D004173 ORTHO05D004885 8.0e-28 128.3 215 38.1
TAR365G0355 Trochodendron aralioides HOM05D004173 ORTHO05D004885 8.0e-28 128.3 175 40.6
Gohir.A13G006500 Gossypium hirsutum HOM05D004173 ORTHO05D004885 1.0e-27 127.9 217 36.9
Dinv21845 Davidia involucrata HOM05D004173 ORTHO05D004885 1.4e-27 127.5 160 42.5
HanXRQChr08g0221561 Helianthus annuus HOM05D004173 ORTHO05D004885 1.4e-27 127.5 200 41.5
TAR365G1150 Trochodendron aralioides HOM05D004173 ORTHO05D004885 1.4e-27 127.5 173 40.5
PSO421G0661 Papaver somniferum HOM05D004173 ORTHO05D004885 1.8e-27 127.1 191 39.8
Gohir.D13G006700 Gossypium hirsutum HOM05D004173 ORTHO05D004885 4.0e-27 125.9 208 37.5
HanXRQChr09g0252211 Helianthus annuus HOM05D004173 ORTHO05D004885 1.2e-26 124.4 206 41.3
Zm00001eb215400 Zea mays HOM05D004173 ORTHO05D004885 1.2e-26 124.4 164 41.5
PSO063G2850 Papaver somniferum HOM05D004173 ORTHO05D004885 1.5e-26 124.0 199 39.2
HPP92_012755 Vanilla planifolia HOM05D004173 ORTHO05D004885 7.5e-26 121.7 235 34.9
ECA238G3313 Erigeron canadensis HOM05D004173 ORTHO05D004885 1.3e-25 120.9 159 44.7
MSTRG.18054 Avicennia marina HOM05D004173 ORTHO05D004885 1.7e-25 120.6 178 39.3
Os03g0736900 Oryza sativa ssp. japonica HOM05D004173 ORTHO05D004885 1.7e-25 120.6 157 39.5
PSO266G0063 Papaver somniferum HOM05D004173 ORTHO05D004885 2.8e-25 119.8 180 37.8
Zm00001eb056440 Zea mays HOM05D004173 ORTHO05D004885 2.8e-25 119.8 173 39.3
Gohir.A05G403100 Gossypium hirsutum HOM05D004173 ORTHO05D004885 4.9e-25 119.0 133 41.4
Nitab4.5_0000375g0240 Nicotiana tabacum HOM05D004173 ORTHO05D004885 1.4e-24 117.5 90 64.4
PSO478G3294 Papaver somniferum HOM05D004173 ORTHO05D004885 1.8e-24 117.1 180 37.8
Lsat_1_v5_gn_2_126200 Lactuca sativa HOM05D004173 ORTHO05D004885 4.1e-24 115.9 225 38.7
Gohir.D04G012400 Gossypium hirsutum HOM05D004173 ORTHO05D004885 5.4e-24 115.5 128 42.2
Aqoxy5G02899 Aquilegia oxysepala HOM05D004173 ORTHO05D004885 7.0e-24 115.2 178 33.7
Gorai.012G014700 Gossypium raimondii HOM05D004173 ORTHO05D004885 2.0e-23 113.6 128 42.2
EL10Ac2g02643 Beta vulgaris HOM05D004173 ORTHO05D004885 2.7e-23 113.2 122 49.2
CAN.G546.44 Capsicum annuum HOM05D004173 ORTHO05D004885 5.9e-23 112.1 124 53.2
Sc05g0006880 Simmondsia chinensis HOM05D004173 ORTHO05D004885 2.8e-20 103.2 143 40.6
ATR0124G034 Amborella trichopoda HOM05D004173 ORTHO05D004885 2.3e-19 100.1 179 34.1
ATR0776G079 Amborella trichopoda HOM05D004173 ORTHO05D004885 4.0e-19 99.4 162 33.3
CDE04G1376 Ceratophyllum demersum HOM05D004173 ORTHO05D004885 4.0e-19 99.4 189 32.8
CDE02G3998 Ceratophyllum demersum HOM05D004173 ORTHO05D004885 2.6e-18 96.7 150 34.7
SEGI_03811 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 1.1e-16 91.3 187 31.6
Pp3c2_14400 Physcomitrium patens HOM05D004173 ORTHO05D004885 5.4e-16 89.0 166 32.5
SEGI_33270 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 7.0e-16 88.6 178 29.8
Ah.14g087000 Amaranthus hybridus HOM05D004173 ORTHO05D004885 7.8e-15 85.1 201 30.3
Phvul.009G044000 Phaseolus vulgaris HOM05D004173 ORTHO05D004885 1.7e-14 84.0 64 60.9
Pp3c14_17300 Physcomitrium patens HOM05D004173 ORTHO05D004885 1.7e-14 84.0 170 29.4
Lalb_Chr11g0067791 Lupinus albus HOM05D004173 ORTHO05D004885 2.5e-13 80.1 75 54.7
Actinidia07794 Actinidia chinensis HOM05D004173 ORTHO05D004885 1.2e-12 77.8 146 34.9
Dinv05055 Davidia involucrata HOM05D004173 ORTHO05D004885 1.5e-10 70.9 83 42.2
Pp3c10_16350 Physcomitrium patens HOM05D004173 ORTHO05D004885 2.0e-10 70.5 150 31.3
Rhsim10G0215400 Rhododendron simsii HOM05D000820 ORTHO05D016785 2.0e-10 70.5 128 32.0
ECA233G6175 Erigeron canadensis HOM05D004173 ORTHO05D004885 1.9e-08 63.9 139 30.9


User provided reference genes

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