Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000170g0290 Nicotiana tabacum HOM05D001034 ORTHO05D283439 3.3e-65 251.5 124 100.0
Rhsim10G0093100 Rhododendron simsii HOM05D001034 ORTHO05D000955 2.0e-09 66.2 96 43.8
Lj4A168T49 Lonicera japonica HOM05D001034 ORTHO05D000955 7.5e-09 64.3 36 80.6
Nitab4.5_0002390g0030 Nicotiana tabacum HOM05D001034 ORTHO05D000955 1.7e-08 63.2 36 80.6
Nitab4.5_0003478g0020 Nicotiana tabacum HOM05D001034 ORTHO05D000955 1.7e-08 63.2 36 80.6
Oeu061810.1 Olea europaea HOM05D001034 ORTHO05D000955 1.7e-08 63.2 36 80.6
Solyc02g091970.4 Solanum lycopersicum HOM05D001034 ORTHO05D000955 1.7e-08 63.2 36 80.6
Sopen02g036540 Solanum pennellii HOM05D001034 ORTHO05D000955 1.7e-08 63.2 36 80.6
PGSC0003DMG400021425 Solanum tuberosum HOM05D001034 ORTHO05D000955 1.7e-08 63.2 36 80.6
Peaxi162Scf00118g01412 Petunia axillaris HOM05D001034 ORTHO05D000955 2.8e-08 62.4 36 80.6
Cc07_g07510 Coffea canephora HOM05D001034 ORTHO05D000955 3.7e-08 62.0 36 77.8
Oeu013351.1 Olea europaea HOM05D001034 ORTHO05D000955 3.7e-08 62.0 36 77.8
Prupe.6G214200 Prunus persica HOM05D001034 ORTHO05D000955 4.9e-08 61.6 36 77.8
Peaxi162Scf00096g01719 Petunia axillaris HOM05D001034 ORTHO05D000955 6.3e-08 61.2 36 77.8
MSTRG.2800 Avicennia marina HOM05D001034 ORTHO05D000955 8.3e-08 60.8 36 77.8
CAN.G1343.19 Capsicum annuum HOM05D001034 ORTHO05D000955 1.4e-07 60.1 36 75.0
SalBow3G2307 Salvia bowleyana HOM05D001034 ORTHO05D000955 1.4e-07 60.1 36 75.0
Nitab4.5_0000419g0010 Nicotiana tabacum HOM05D001034 ORTHO05D000955 1.8e-07 59.7 36 77.8
Nitab4.5_0002639g0010 Nicotiana tabacum HOM05D001034 ORTHO05D000955 1.8e-07 59.7 36 77.8
Oeu013350.1 Olea europaea HOM05D001034 ORTHO05D000955 1.8e-07 59.7 36 75.0
Gohir.A11G211200 Gossypium hirsutum HOM05D001034 ORTHO05D000955 2.4e-07 59.3 36 75.0
SGA_v2.0_scaffold121G33070 Striga asiatica HOM05D001034 ORTHO05D000955 2.4e-07 59.3 36 75.0
TAR376G0429 Trochodendron aralioides HOM05D001034 ORTHO05D000955 2.4e-07 59.3 36 77.8
Actinidia11954 Actinidia chinensis HOM05D001034 ORTHO05D000955 3.1e-07 58.9 36 72.2
Gohir.D11G211900 Gossypium hirsutum HOM05D001034 ORTHO05D000955 3.1e-07 58.9 36 75.0
Gorai.007G227600 Gossypium raimondii HOM05D001034 ORTHO05D000955 3.1e-07 58.9 36 75.0
TWI53G0655 Tripterygium wilfordii HOM05D001034 ORTHO05D000955 3.1e-07 58.9 36 75.0
TWI74G0267 Tripterygium wilfordii HOM05D001034 ORTHO05D000955 3.1e-07 58.9 36 75.0
CSS0039128 Camellia sinensis var. sinensis HOM05D001034 ORTHO05D000955 4.1e-07 58.5 36 72.2
CSS0044075 Camellia sinensis var. sinensis HOM05D001034 ORTHO05D000955 4.1e-07 58.5 36 72.2
Lj2A424T68 Lonicera japonica HOM05D001034 ORTHO05D000955 4.1e-07 58.5 36 75.0
Sabra07G0006200 Salix brachista HOM05D001034 ORTHO05D000955 4.1e-07 58.5 36 75.0
CsaV3_6G044420 Cucumis sativus L. HOM05D001034 ORTHO05D000955 5.4e-07 58.2 36 72.2
CSS0003140 Camellia sinensis var. sinensis HOM05D001034 ORTHO05D000955 7.0e-07 57.8 36 72.2
Duzib187G1136 Durio zibethinus HOM05D001034 ORTHO05D000955 7.0e-07 57.8 36 72.2
Duzib264G0251 Durio zibethinus HOM05D001034 ORTHO05D000955 7.0e-07 57.8 36 72.2
vmacro06402 Vaccinium macrocarpon HOM05D001034 ORTHO05D000955 7.0e-07 57.8 36 72.2
ClCG01G017900 Citrullus lanatus HOM05D001034 ORTHO05D000955 9.2e-07 57.4 36 72.2
Migut.H00317 Erythranthe guttata HOM05D001034 ORTHO05D000955 9.2e-07 57.4 36 75.0
Rhsim10G0049400 Rhododendron simsii HOM05D001034 ORTHO05D000955 9.2e-07 57.4 36 72.2
MD15G1302500 Malus domestica HOM05D001034 ORTHO05D000955 1.2e-06 57.0 36 72.2
CDE04G0326 Ceratophyllum demersum HOM05D001034 ORTHO05D000955 1.6e-06 56.6 36 72.2
MELO3C007664.2 Cucumis melo HOM05D001034 ORTHO05D000955 1.6e-06 56.6 36 72.2
MD02G1191100 Malus domestica HOM05D001034 ORTHO05D000955 1.6e-06 56.6 36 72.2
MD02G1191300 Malus domestica HOM05D001034 ORTHO05D000955 1.6e-06 56.6 36 72.2
unitig_748.g8381 Utricularia gibba HOM05D001034 ORTHO05D000955 1.6e-06 56.6 36 72.2
DCAR_014322 Daucus carota HOM05D001034 ORTHO05D000955 2.0e-06 56.2 36 69.4
Manes.12G118700 Manihot esculenta HOM05D001034 ORTHO05D000955 2.0e-06 56.2 36 72.2
Potri.007G008000 Populus trichocarpa HOM05D001034 ORTHO05D000955 2.0e-06 56.2 36 69.4
Gohir.A12G073933 Gossypium hirsutum HOM05D001034 ORTHO05D000955 2.7e-06 55.8 36 69.4
Gohir.D12G077901 Gossypium hirsutum HOM05D001034 ORTHO05D000955 2.7e-06 55.8 36 69.4
Gorai.008G086600 Gossypium raimondii HOM05D001034 ORTHO05D000955 2.7e-06 55.8 36 69.4
Hma1.2p1_0477F.1_g161040 Hydrangea macrophylla HOM05D001034 ORTHO05D000955 2.7e-06 55.8 36 72.2
SGA_v2.0_scaffold269G46266 Striga asiatica HOM05D001034 ORTHO05D000955 2.7e-06 55.8 36 75.0
Thecc.01G078300 Theobroma cacao HOM05D001034 ORTHO05D000955 2.7e-06 55.8 36 72.2
VMungo1215G1643 Vigna mungo HOM05D001034 ORTHO05D000955 2.7e-06 55.8 36 69.4
Solyc03g043880.3 Solanum lycopersicum HOM05D001034 ORTHO05D000955 3.5e-06 55.5 36 69.4
Sopen03g007690 Solanum pennellii HOM05D001034 ORTHO05D000955 3.5e-06 55.5 36 69.4
PGSC0003DMG400017100 Solanum tuberosum HOM05D001034 ORTHO05D000955 3.5e-06 55.5 36 69.4
Cpa.g.sc129.58 Carica papaya HOM05D001034 ORTHO05D000955 4.5e-06 55.1 36 69.4
Ciclev10001439m.g Citrus clementina HOM05D001034 ORTHO05D000955 4.5e-06 55.1 93 35.5
Sed0027381 Sechium edule HOM05D001034 ORTHO05D000955 4.5e-06 55.1 36 72.2
Sc03g0000730 Simmondsia chinensis HOM05D001034 ORTHO05D000955 4.5e-06 55.1 36 69.4
THA.LOC104801908 Tarenaya hassleriana HOM05D001034 ORTHO05D000955 4.5e-06 55.1 36 72.2
THA.LOC104808469 Tarenaya hassleriana HOM05D001034 ORTHO05D000955 4.5e-06 55.1 36 72.2
THA.LOC104821218 Tarenaya hassleriana HOM05D001034 ORTHO05D000955 4.5e-06 55.1 36 72.2
vmacro16487 Vaccinium macrocarpon HOM05D001034 ORTHO05D000955 4.5e-06 55.1 36 69.4
Ah.03g139510 Amaranthus hybridus HOM05D001034 ORTHO05D000955 5.9e-06 54.7 36 63.9
AUR62007978 Chenopodium quinoa HOM05D001034 ORTHO05D000955 5.9e-06 54.7 36 63.9
DCAR_025831 Daucus carota HOM05D001034 ORTHO05D000955 5.9e-06 54.7 33 72.7
Dinv24375 Davidia involucrata HOM05D001034 ORTHO05D000955 5.9e-06 54.7 36 72.2
Glyma.01G196300 Glycine max HOM05D001034 ORTHO05D000955 5.9e-06 54.7 36 69.4
Glyma.11G045300 Glycine max HOM05D001034 ORTHO05D000955 5.9e-06 54.7 36 69.4
PSO017G0879 Papaver somniferum HOM05D001034 ORTHO05D000955 5.9e-06 54.7 35 71.4
PSO170G0075 Papaver somniferum HOM05D001034 ORTHO05D000955 5.9e-06 54.7 35 71.4
Atru.chr3.1078 Acer truncatum HOM05D001034 ORTHO05D000955 7.7e-06 54.3 36 69.4
Phvul.002G008700 Phaseolus vulgaris HOM05D001034 ORTHO05D000955 7.7e-06 54.3 36 66.7
QL06p038426 Quercus lobata HOM05D001034 ORTHO05D000955 7.7e-06 54.3 36 66.7


User provided reference genes

Program Settings