Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000170g0090 Nicotiana tabacum HOM05D005951 ORTHO05D007025 2.0e-127 459.1 232 100.0
CAN.G54.13 Capsicum annuum HOM05D005951 ORTHO05D007025 2.2e-118 429.1 232 93.5
Peaxi162Scf00474g00521 Petunia axillaris HOM05D005951 ORTHO05D007025 2.0e-116 422.5 232 93.1
PGSC0003DMG400013572 Solanum tuberosum HOM05D005951 ORTHO05D007025 4.5e-116 421.4 225 92.9
Solyc07g042570.3 Solanum lycopersicum HOM05D005951 ORTHO05D007025 7.7e-116 420.6 226 92.0
Sopen07g022260 Solanum pennellii HOM05D005951 ORTHO05D007025 3.8e-115 418.3 226 91.2
CSS0032580 Camellia sinensis var. sinensis HOM05D005951 ORTHO05D007025 2.7e-113 412.1 236 86.4
TAR383G1060 Trochodendron aralioides HOM05D005951 ORTHO05D007025 4.7e-113 411.4 232 86.6
Cpa.g.sc82.63 Carica papaya HOM05D005951 ORTHO05D007025 1.4e-112 409.8 238 84.9
Aqoxy7G04154 Aquilegia oxysepala HOM05D005951 ORTHO05D007025 1.8e-112 409.5 232 86.6
Gorai.009G038100 Gossypium raimondii HOM05D005951 ORTHO05D007025 1.5e-111 406.4 230 85.2
Duzib168G0975 Durio zibethinus HOM05D005951 ORTHO05D007025 2.0e-111 406.0 234 85.0
Dinv25506 Davidia involucrata HOM05D005951 ORTHO05D007025 2.6e-111 405.6 225 88.4
Thecc.09G070300 Theobroma cacao HOM05D005951 ORTHO05D007025 3.3e-111 405.2 236 84.3
GSVIVG01015014001 Vitis vinifera HOM05D005951 ORTHO05D007025 3.3e-111 405.2 225 88.4
Actinidia39617 Actinidia chinensis HOM05D005951 ORTHO05D007025 5.7e-111 404.4 234 85.5
Manes.16G090500 Manihot esculenta HOM05D005951 ORTHO05D007025 9.7e-111 403.7 240 84.6
Gohir.D05G037600 Gossypium hirsutum HOM05D005951 ORTHO05D007025 3.7e-110 401.7 230 84.8
Gohir.A05G036100 Gossypium hirsutum HOM05D005951 ORTHO05D007025 6.3e-110 401.0 238 82.8
MD02G1102200 Malus domestica HOM05D005951 ORTHO05D007025 6.3e-110 401.0 234 83.8
Potri.006G136500 Populus trichocarpa HOM05D005951 ORTHO05D007025 6.3e-110 401.0 236 83.9
Atru.chr7.1767 Acer truncatum HOM05D005951 ORTHO05D007025 8.2e-110 400.6 233 83.7
QL11p002956 Quercus lobata HOM05D005951 ORTHO05D007025 8.2e-110 400.6 234 83.8
Nn6g35632 Nelumbo nucifera HOM05D005951 ORTHO05D007025 1.8e-109 399.4 233 84.5
Lsat_1_v5_gn_5_138841 Lactuca sativa HOM05D005951 ORTHO05D007025 2.4e-109 399.1 233 81.5
Glyma.17G045500 Glycine max HOM05D005951 ORTHO05D007025 4.1e-109 398.3 232 83.6
Nitab4.5_0003139g0080 Nicotiana tabacum HOM05D005951 ORTHO05D007025 4.1e-109 398.3 232 89.2
RcHm_v2.0_Chr2g0095941 Rosa chinensis HOM05D005951 ORTHO05D007025 4.1e-109 398.3 225 85.3
Sed0006808 Sechium edule HOM05D005951 ORTHO05D007025 4.1e-109 398.3 233 83.7
ClCG03G014750 Citrullus lanatus HOM05D005951 ORTHO05D007025 5.3e-109 397.9 233 83.3
ATR0317G112 Amborella trichopoda HOM05D005951 ORTHO05D007025 1.2e-108 396.7 232 83.6
CiPaw.03G200400 Carya illinoinensis HOM05D005951 ORTHO05D007025 1.2e-108 396.7 232 83.6
FvH4_1g09390 Fragaria vesca HOM05D005951 ORTHO05D007025 1.6e-108 396.4 224 85.7
FAN19G2090 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.6e-108 396.4 224 85.7
Lj4g0000458 Lotus japonicus HOM05D005951 ORTHO05D007025 1.6e-108 396.4 232 83.6
CiPaw.04G140200 Carya illinoinensis HOM05D005951 ORTHO05D007025 3.5e-108 395.2 232 83.6
Cc06_g12700 Coffea canephora HOM05D005951 ORTHO05D007025 3.5e-108 395.2 230 83.9
Sabra06G0106700 Salix brachista HOM05D005951 ORTHO05D007025 3.5e-108 395.2 236 82.2
FAN26G0600 Fragaria x ananassa HOM05D005951 ORTHO05D007025 4.5e-108 394.8 224 85.3
FAN26G2189 Fragaria x ananassa HOM05D005951 ORTHO05D007025 4.5e-108 394.8 224 84.8
Prupe.7G192100 Prunus persica HOM05D005951 ORTHO05D007025 4.5e-108 394.8 233 82.4
Cfa002937 Carpinus fangiana HOM05D005951 ORTHO05D007025 5.9e-108 394.4 232 83.6
Duzib150G0422 Durio zibethinus HOM05D005951 ORTHO05D007025 5.9e-108 394.4 225 84.4
FAN28G0037 Fragaria x ananassa HOM05D005951 ORTHO05D007025 7.7e-108 394.0 224 84.8
FAN28G0822 Fragaria x ananassa HOM05D005951 ORTHO05D007025 7.7e-108 394.0 224 84.8
Potri.018G063600 Populus trichocarpa HOM05D005951 ORTHO05D007025 7.7e-108 394.0 230 84.3
CsaV3_1G041410 Cucumis sativus L. HOM05D005951 ORTHO05D007025 1.0e-107 393.7 233 83.3
Sed0027227 Sechium edule HOM05D005951 ORTHO05D007025 1.3e-107 393.3 233 82.4
Eucgr.C03197 Eucalyptus grandis HOM05D005951 ORTHO05D007025 1.7e-107 392.9 224 83.5
Eucgr.L02230 Eucalyptus grandis HOM05D005951 ORTHO05D007025 1.7e-107 392.9 224 83.5
Manes.03G044600 Manihot esculenta HOM05D005951 ORTHO05D007025 2.2e-107 392.5 235 81.7
VMungo1215G3086 Vigna mungo HOM05D005951 ORTHO05D007025 3.8e-107 391.7 232 83.2
CANSAT56G0193 Cannabis sativa HOM05D005951 ORTHO05D007025 1.5e-106 389.8 224 84.4
arahy.Tifrunner.gnm1.ann1.7AU96Q Arachis hypogaea HOM05D005951 ORTHO05D007025 1.9e-106 389.4 234 82.5
Glyma.13G114300 Glycine max HOM05D005951 ORTHO05D007025 1.9e-106 389.4 232 83.2
CANSAT56G0116 Cannabis sativa HOM05D005951 ORTHO05D007025 3.2e-106 388.7 224 84.4
PSO724G0923 Papaver somniferum HOM05D005951 ORTHO05D007025 3.2e-106 388.7 232 81.9
MD15G1223700 Malus domestica HOM05D005951 ORTHO05D007025 4.2e-106 388.3 234 81.2
Medtr4g124640 Medicago truncatula HOM05D005951 ORTHO05D007025 5.5e-106 387.9 236 83.1
arahy.Tifrunner.gnm1.ann1.JRQ3DB Arachis hypogaea HOM05D005951 ORTHO05D007025 7.2e-106 387.5 233 82.4
PSO135G0575 Papaver somniferum HOM05D005951 ORTHO05D007025 7.2e-106 387.5 232 81.5
Phvul.003G127300 Phaseolus vulgaris HOM05D005951 ORTHO05D007025 7.2e-106 387.5 232 82.8
Haze_26069 Corylus avellana HOM05D005951 ORTHO05D007025 2.1e-105 386.0 247 79.4
FAN23G1113 Fragaria x ananassa HOM05D005951 ORTHO05D007025 4.7e-105 384.8 228 82.5
MSTRG.26500 Avicennia marina HOM05D005951 ORTHO05D007025 6.1e-105 384.4 236 78.8
COL.COLO4_21208 Corchorus olitorius HOM05D005951 ORTHO05D007025 8.0e-105 384.0 230 82.2
TWI34G0930 Tripterygium wilfordii HOM05D005951 ORTHO05D007025 1.0e-104 383.6 236 80.9
MBI13_g01673_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 2.3e-104 382.5 230 81.3
Ca_21339_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002721 3.0e-104 382.1 230 82.6
Ciclev10009369m.g Citrus clementina HOM05D005951 ORTHO05D007025 3.0e-104 382.1 233 79.8
Lalb_Chr07g0181411 Lupinus albus HOM05D005951 ORTHO05D007025 2.0e-103 379.4 233 81.5
Oeu041808.1 Olea europaea HOM05D005951 ORTHO05D007025 2.0e-103 379.4 225 81.3
DCAR_028530 Daucus carota HOM05D005951 ORTHO05D007025 1.3e-102 376.7 233 79.8
Lalb_Chr13g0299191 Lupinus albus HOM05D005951 ORTHO05D007025 1.7e-102 376.3 237 79.7
ECA234G1587 Erigeron canadensis HOM05D005951 ORTHO05D007025 3.7e-102 375.2 232 75.9
Migut.J00881 Erythranthe guttata HOM05D005951 ORTHO05D007025 4.8e-102 374.8 240 77.9
TPR.G12577 Trifolium pratense HOM05D005951 ORTHO05D007025 6.3e-102 374.4 226 80.5
EL10Ac8g18966 Beta vulgaris HOM05D005951 ORTHO05D007025 1.1e-101 373.6 238 78.2
Sp7g31000 Schrenkiella parvula HOM05D005951 ORTHO05D007025 4.1e-101 371.7 232 76.7
BcaC01g01000 Brassica carinata HOM05D005951 ORTHO05D007025 5.4e-101 371.3 232 75.9
BolC3t20971H Brassica oleracea HOM05D005951 ORTHO05D007025 5.4e-101 371.3 232 75.9
HPP92_004361 Vanilla planifolia HOM05D005951 ORTHO05D007025 5.4e-101 371.3 222 79.7
BraA01t00476Z Brassica rapa HOM05D000526 ORTHO05D007025 7.0e-101 370.9 232 77.2
BraA08t33722Z Brassica rapa HOM05D005951 ORTHO05D007025 7.0e-101 370.9 233 76.4
PGR044G1586 Punica granatum HOM05D005951 ORTHO05D007025 7.0e-101 370.9 232 81.0
AUR62028321 Chenopodium quinoa HOM05D005951 ORTHO05D007025 1.2e-100 370.2 218 81.7
C03p86770 Brassica napus HOM05D005951 ORTHO05D007025 2.0e-100 369.4 233 76.4
Thhalv10026154m.g Eutrema salsugineum HOM05D005951 ORTHO05D007025 2.7e-100 369.0 232 75.9
THA.LOC104803783 Tarenaya hassleriana HOM05D005951 ORTHO05D007025 2.7e-100 369.0 232 77.6
BcaB03g12809 Brassica carinata HOM05D005951 ORTHO05D007025 4.5e-100 368.2 232 74.6
Os03g0182700 Oryza sativa ssp. japonica HOM05D005951 ORTHO05D007025 7.7e-100 367.5 226 78.8
BcaC09g52137 Brassica carinata HOM05D005951 ORTHO05D007025 1.7e-99 366.3 232 76.3
AL7G18300 Arabidopsis lyrata HOM05D005951 ORTHO05D007025 6.5e-99 364.4 232 75.4
C01p05390 Brassica napus HOM05D000526 ORTHO05D000956 1.1e-98 363.6 230 76.5
A08p17720 Brassica napus HOM05D005951 ORTHO05D007025 1.5e-98 363.2 225 76.9
CDE07G2051 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 1.5e-98 363.2 234 76.5
Zm00001eb401690 Zea mays HOM05D005951 ORTHO05D007025 1.5e-98 363.2 226 79.6
HanXRQChr10g0319821 Helianthus annuus HOM05D005951 ORTHO05D007025 2.5e-98 362.5 233 77.3
BolC1t00519H Brassica oleracea HOM05D000526 ORTHO05D007025 4.2e-98 361.7 224 77.7
SGA_v2.0_scaffold55G19875 Striga asiatica HOM05D005951 ORTHO05D007025 1.6e-97 359.8 238 76.1
Carub.0007s0721 Capsella rubella HOM05D005951 ORTHO05D007025 8.0e-97 357.5 233 74.2
Aa31LG5G9380 Aethionema arabicum HOM05D005951 ORTHO05D007025 1.4e-96 356.7 232 74.1
SEGI_21232 Sequoiadendron giganteum HOM05D005951 ORTHO05D007025 3.0e-96 355.5 233 74.7
AT4G33250 Arabidopsis thaliana HOM05D005951 ORTHO05D007025 1.5e-95 353.2 232 74.1
MELO3C015553.2 Cucumis melo HOM05D005951 ORTHO05D007025 1.5e-95 353.2 233 76.8
Lj7C692T6 Lonicera japonica HOM05D005951 ORTHO05D007025 2.6e-95 352.4 224 79.9
vmacro17078 Vaccinium macrocarpon HOM05D005951 ORTHO05D007025 9.8e-95 350.5 318 59.7
Oeu000276.3 Olea europaea HOM05D005951 ORTHO05D007025 1.7e-94 349.7 304 60.5
A03p61920 Brassica napus HOM05D000526 ORTHO05D007025 2.4e-93 345.9 256 67.2
unitig_899.g15181 Utricularia gibba HOM05D005951 ORTHO05D007025 7.0e-93 344.4 225 73.3
MBI19_g36230_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 9.2e-93 344.0 232 75.4
Actinidia30258 Actinidia chinensis HOM05D005951 ORTHO05D007025 1.6e-92 343.2 187 88.8
Mapoly0073s0056 Marchantia polymorpha HOM05D005951 ORTHO05D007025 1.5e-90 336.7 222 70.7
Hund26110 Selenicereus undatus HOM05D005951 ORTHO05D007025 1.5e-90 336.7 232 73.3
Pp3c18_14720 Physcomitrium patens HOM05D005951 ORTHO05D007025 8.9e-88 327.4 230 67.4
Pp3c21_14860 Physcomitrium patens HOM05D005951 ORTHO05D007025 4.4e-87 325.1 223 68.2
BcaNung02163 Brassica carinata HOM05D005951 ORTHO05D007025 9.8e-87 323.9 232 68.5
AUR62025338 Chenopodium quinoa HOM05D005951 ORTHO05D007025 2.9e-86 322.4 192 80.7
C07p59570 Brassica napus HOM05D005951 ORTHO05D007025 3.7e-86 322.0 232 68.5
Rhsim05G0002100 Rhododendron simsii HOM05D005951 ORTHO05D007025 1.1e-85 320.5 237 69.6
Zm00001eb401710 Zea mays HOM05D005951 ORTHO05D007025 1.6e-84 316.6 198 79.3
BraA03t15230Z Brassica rapa HOM05D005951 ORTHO05D007025 1.1e-82 310.5 191 77.5
SMO239G0051 Selaginella moellendorffii HOM05D005951 ORTHO05D007025 9.5e-82 307.4 232 61.6
CDE06G1359 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 1.4e-80 303.5 198 76.8
Zm00001eb006150 Zea mays HOM05D005951 ORTHO05D007025 4.0e-72 275.4 168 79.8
BolC7t46402H Brassica oleracea HOM05D005951 ORTHO05D007025 1.7e-70 270.0 197 67.5
Sc08g0009170 Simmondsia chinensis HOM05D005951 ORTHO05D007025 4.6e-68 261.9 154 83.1
Migut.L01596 Erythranthe guttata HOM05D005951 ORTHO05D007025 1.0e-67 260.8 224 61.6
AagrBONN_evm.TU.Sc2ySwM_117.912 Anthoceros agrestis HOM05D005951 ORTHO05D007025 1.2e-57 227.3 155 67.7
CBR_g16046 Chara braunii HOM05D005951 ORTHO05D007025 1.5e-55 220.3 218 52.3
CARHR241300 Cardamine hirsuta HOM05D005951 ORTHO05D007025 6.7e-43 178.3 119 67.2
SalBow6G6500 Salvia bowleyana HOM05D005951 ORTHO05D007025 3.2e-37 159.5 91 84.6
Cre12.g515650 Chlamydomonas reinhardtii HOM05D005951 ORTHO05D007025 1.1e-34 151.0 189 38.1
MD02G1101200 Malus domestica HOM05D005951 ORTHO05D007025 1.0e-30 137.9 97 76.3
PRCOL_00003879 Prasinoderma coloniale HOM05D005951 ORTHO05D007025 2.8e-25 119.8 209 34.0
ATR0705G105 Amborella trichopoda HOM05D005951 ORTHO05D007025 1.7e-09 67.4 40 72.5


User provided reference genes

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