Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000169g0180 Nicotiana tabacum HOM05D005742 ORTHO05D001888 1.9e-148 529.3 293 100.0
Nitab4.5_0002218g0040 Nicotiana tabacum HOM05D005742 ORTHO05D001888 1.3e-115 420.2 270 89.3
CAN.G244.7 Capsicum annuum HOM05D005742 ORTHO05D001888 2.5e-71 273.1 271 59.8
PGSC0003DMG400021845 Solanum tuberosum HOM05D005742 ORTHO05D001888 2.8e-70 269.6 302 55.0
Solyc01g059940.2 Solanum lycopersicum HOM05D005742 ORTHO05D001888 9.9e-68 261.2 302 52.6
Sopen01g026080 Solanum pennellii HOM05D005742 ORTHO05D001888 1.6e-62 243.8 268 54.1
Peaxi162Scf00228g00024 Petunia axillaris HOM05D005742 ORTHO05D001888 6.8e-61 238.4 230 64.8
Lj6P690T34 Lonicera japonica HOM05D005742 ORTHO05D001888 1.6e-33 147.5 157 48.4
DCAR_027000 Daucus carota HOM05D005742 ORTHO05D001888 1.6e-30 137.5 147 46.3
Cc03_g00920 Coffea canephora HOM05D005742 ORTHO05D001888 3.1e-29 133.3 153 45.1
MSTRG.24819 Avicennia marina HOM05D005742 ORTHO05D001888 1.9e-26 124.0 196 41.8
Migut.N00045 Erythranthe guttata HOM05D005742 ORTHO05D001888 1.9e-26 124.0 144 42.4
Actinidia18454 Actinidia chinensis HOM05D005742 ORTHO05D001888 2.5e-26 123.6 146 45.2
Actinidia40376 Actinidia chinensis HOM05D005742 ORTHO05D001888 2.5e-26 123.6 146 45.2
Oeu003757.1 Olea europaea HOM05D005742 ORTHO05D001888 3.2e-26 123.2 148 43.2
Actinidia15607 Actinidia chinensis HOM05D005742 ORTHO05D001888 4.2e-26 122.9 147 44.9
CSS0018184 Camellia sinensis var. sinensis HOM05D005742 ORTHO05D001888 1.2e-25 121.3 290 35.9
CSS0026509 Camellia sinensis var. sinensis HOM05D005742 ORTHO05D001888 1.2e-25 121.3 290 35.9
Migut.G00051 Erythranthe guttata HOM05D005742 ORTHO05D001888 2.7e-25 120.2 170 40.6
Oeu032017.1 Olea europaea HOM05D005742 ORTHO05D001888 2.7e-25 120.2 190 38.9
unitig_0.g2583 Utricularia gibba HOM05D005742 ORTHO05D001888 3.5e-25 119.8 146 42.5
Hma1.2p1_0013F.1_g008650 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 4.6e-25 119.4 150 44.0
Dinv44293 Davidia involucrata HOM05D005742 ORTHO05D001888 3.0e-24 116.7 162 40.7
Rhsim02G0004500 Rhododendron simsii HOM05D005742 ORTHO05D001888 3.0e-24 116.7 152 41.4
MSTRG.21772 Avicennia marina HOM05D005742 ORTHO05D001888 2.5e-23 113.6 212 36.3
Dinv15186 Davidia involucrata HOM05D001340 ORTHO05D002318 3.3e-23 113.2 120 48.3
SalBow8G0437 Salvia bowleyana HOM05D005742 ORTHO05D001888 9.7e-23 111.7 212 37.3
CANSAT78G0521 Cannabis sativa HOM05D005742 ORTHO05D001888 1.3e-22 111.3 145 42.8
SalBow8G4915 Salvia bowleyana HOM05D005742 ORTHO05D001888 1.6e-22 110.9 188 38.8
Rhsim04G0235100 Rhododendron simsii HOM05D005742 ORTHO05D001888 2.2e-22 110.5 151 39.7
SGA_v2.0_scaffold473G52104 Striga asiatica HOM05D005742 ORTHO05D001888 3.7e-22 109.8 160 38.8
TAR362G0759 Trochodendron aralioides HOM05D005742 ORTHO05D001888 3.7e-22 109.8 149 42.3
MSTRG.3861 Avicennia marina HOM05D005742 ORTHO05D001888 6.3e-22 109.0 152 36.2
CiPaw.02G075500 Carya illinoinensis HOM05D005742 ORTHO05D001888 6.3e-22 109.0 143 44.1
TWI09G1381 Tripterygium wilfordii HOM05D005742 ORTHO05D001888 8.2e-22 108.6 156 35.9
vmacro08056 Vaccinium macrocarpon HOM05D001258 ORTHO05D000158 3.1e-21 106.7 145 38.6
Cpa.g.sc9.68 Carica papaya HOM05D005742 ORTHO05D001888 6.9e-21 105.5 143 37.8
Duzib052G0264 Durio zibethinus HOM05D005742 ORTHO05D001888 3.4e-20 103.2 159 34.6
TAR633G1530 Trochodendron aralioides HOM05D005742 ORTHO05D001888 7.7e-20 102.1 146 40.4
DCAR_023352 Daucus carota HOM05D005742 ORTHO05D001888 1.0e-19 101.7 193 33.2
unitig_22.g6961 Utricularia gibba HOM05D005742 ORTHO05D001888 1.0e-19 101.7 150 35.3
Haze_01291 Corylus avellana HOM05D005742 ORTHO05D001888 1.3e-19 101.3 143 41.3
Sabra14G0088400 Salix brachista HOM05D008182 ORTHO05D001888 8.5e-19 98.6 154 37.7
Gohir.D02G058775 Gossypium hirsutum HOM05D005742 ORTHO05D001888 1.1e-18 98.2 152 37.5
Gorai.005G066500 Gossypium raimondii HOM05D005742 ORTHO05D001888 1.1e-18 98.2 152 37.5
TWI53G1179 Tripterygium wilfordii HOM05D005742 ORTHO05D001888 1.1e-18 98.2 234 30.3
vmacro15186 Vaccinium macrocarpon HOM05D005742 ORTHO05D001888 1.4e-18 97.8 294 33.0
CDE02G2547 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 1.9e-18 97.4 147 35.4
MBI19_g03227_MAGBIO Magnolia biondii HOM05D005742 ORTHO05D001888 7.2e-18 95.5 187 33.7
Manes.05G004700 Manihot esculenta HOM05D008182 ORTHO05D001888 1.2e-17 94.7 147 35.4
Cfa015324 Carpinus fangiana HOM05D005742 ORTHO05D001888 1.6e-17 94.4 212 33.5
QL06p011856 Quercus lobata HOM05D005742 ORTHO05D001888 1.6e-17 94.4 267 34.5
MBI18_g17308_MAGBIO Magnolia biondii HOM05D005742 ORTHO05D001888 2.7e-17 93.6 147 32.0
Prupe.1G118800 Prunus persica HOM05D005742 ORTHO05D001888 7.9e-17 92.0 298 31.2
Ah.04g157100 Amaranthus hybridus HOM05D005742 ORTHO05D001888 1.0e-16 91.7 152 34.2
Ciclev10007183m.g Citrus clementina HOM05D005742 ORTHO05D001888 1.0e-16 91.7 151 37.7
Manes.01G228700 Manihot esculenta HOM05D008182 ORTHO05D001888 1.0e-16 91.7 200 33.5
ATR0796G165 Amborella trichopoda HOM05D005742 ORTHO05D001888 2.3e-16 90.5 150 33.3
Duzib151G0239 Durio zibethinus HOM05D005742 ORTHO05D001888 3.9e-16 89.7 160 33.1
Thecc.04G299300 Theobroma cacao HOM05D005742 ORTHO05D001888 6.7e-16 89.0 159 31.4
Gohir.A02G054001 Gossypium hirsutum HOM05D005742 ORTHO05D001888 2.0e-15 87.4 146 34.9
SGA_v2.0_scaffold104G30095 Striga asiatica HOM05D005742 ORTHO05D001888 2.0e-15 87.4 122 41.8
Potri.014G119200 Populus trichocarpa HOM05D008182 ORTHO05D001888 3.3e-15 86.7 146 35.6
HPP92_027565 Vanilla planifolia HOM05D005742 ORTHO05D001888 3.3e-15 86.7 144 35.4
HPP92_017245 Vanilla planifolia HOM05D005742 ORTHO05D001888 4.3e-15 86.3 144 35.4
Sabra02G0161800 Salix brachista HOM05D008182 ORTHO05D001888 5.7e-15 85.9 149 34.9
Glyma.09G036200 Glycine max HOM05D005742 ORTHO05D001888 7.4e-15 85.5 195 32.8
Duzib211G0330 Durio zibethinus HOM05D008182 ORTHO05D001888 1.7e-14 84.3 148 33.8
FvH4_4g19570 Fragaria vesca HOM05D005742 ORTHO05D001888 1.7e-14 84.3 145 31.7
unitig_749.g13364 Utricularia gibba HOM05D005742 ORTHO05D001888 1.7e-14 84.3 188 32.4
Eucgr.H01005 Eucalyptus grandis HOM05D005742 ORTHO05D001888 2.8e-14 83.6 144 33.3
RcHm_v2.0_Chr4g0424831 Rosa chinensis HOM05D005742 ORTHO05D001888 2.8e-14 83.6 304 29.9
Glyma.15G141100 Glycine max HOM05D005742 ORTHO05D001888 3.7e-14 83.2 246 30.9
Nn4g25584 Nelumbo nucifera HOM05D005742 ORTHO05D001888 8.2e-14 82.0 149 32.2
THA.LOC104802706 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 8.2e-14 82.0 145 31.7
Sp3g05640 Schrenkiella parvula HOM05D005742 ORTHO05D001888 1.1e-13 81.6 146 35.6
Carub.0004s3006 Capsella rubella HOM05D026554 ORTHO05D001888 1.8e-13 80.9 161 32.3
MD16G1155100 Malus domestica HOM05D005742 ORTHO05D001888 2.4e-13 80.5 294 32.0
Lsat_1_v5_gn_1_41021 Lactuca sativa HOM05D005742 ORTHO05D001888 5.3e-13 79.3 114 38.6
Phvul.006G117500 Phaseolus vulgaris HOM05D005742 ORTHO05D001888 5.3e-13 79.3 150 36.0
Potri.002G194800 Populus trichocarpa HOM05D008182 ORTHO05D001888 1.2e-12 78.2 178 33.1
BcaC05g30549 Brassica carinata HOM05D005742 ORTHO05D001888 1.5e-12 77.8 146 37.0
TWI75G0476 Tripterygium wilfordii HOM05D008182 ORTHO05D001888 1.5e-12 77.8 149 32.9
Gohir.D08G050500 Gossypium hirsutum HOM05D008182 ORTHO05D001888 2.0e-12 77.4 148 31.8
Hma1.2p1_0129F.1_g060190 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 2.0e-12 77.4 82 50.0
Potri.002G194900 Populus trichocarpa HOM05D008182 ORTHO05D001888 2.0e-12 77.4 178 33.1
Gohir.A11G108700 Gossypium hirsutum HOM05D008182 ORTHO05D001888 2.6e-12 77.0 145 31.0
VMungo0540G2083 Vigna mungo HOM05D005742 ORTHO05D001888 3.4e-12 76.6 152 33.6
Hma1.2p1_0293F.1_g116340 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 4.5e-12 76.3 82 50.0
Actinidia06790 Actinidia chinensis HOM05D005742 ORTHO05D001888 5.9e-12 75.9 75 48.0
AL3G17770 Arabidopsis lyrata HOM05D005742 ORTHO05D001888 5.9e-12 75.9 183 32.2
Duzib138G0624 Durio zibethinus HOM05D008182 ORTHO05D001888 5.9e-12 75.9 185 30.3
Gohir.A08G040400 Gossypium hirsutum HOM05D008182 ORTHO05D001888 5.9e-12 75.9 148 32.4
Gohir.A09G224800 Gossypium hirsutum HOM05D008182 ORTHO05D001888 5.9e-12 75.9 141 31.2
Gorai.004G050100 Gossypium raimondii HOM05D008182 ORTHO05D001888 5.9e-12 75.9 148 31.1
Nn3g21713 Nelumbo nucifera HOM05D005742 ORTHO05D001888 5.9e-12 75.9 189 31.7
BcaC09g47911 Brassica carinata HOM05D005742 ORTHO05D001888 7.7e-12 75.5 147 34.0
BolC1t05594H Brassica oleracea HOM05D005742 ORTHO05D001888 7.7e-12 75.5 147 34.0
Ca_01851_v3 Cicer arietinum L. HOM05D005742 ORTHO05D001888 7.7e-12 75.5 118 37.3
FAN12G0951 Fragaria x ananassa HOM05D001258 ORTHO05D000158 1.0e-11 75.1 213 28.6
Os12g0561500 Oryza sativa ssp. japonica HOM05D005742 ORTHO05D001888 1.0e-11 75.1 146 32.9
Atru.chr4.3013 Acer truncatum HOM05D005742 ORTHO05D001888 2.2e-11 73.9 137 32.8
VMungo0540G0961 Vigna mungo HOM05D005742 ORTHO05D001888 2.2e-11 73.9 153 30.7
Aa31LG5G17240 Aethionema arabicum HOM05D005742 ORTHO05D001888 2.9e-11 73.6 146 32.2
Thecc.01G314800 Theobroma cacao HOM05D008182 ORTHO05D001888 2.9e-11 73.6 146 31.5
Actinidia21348 Actinidia chinensis HOM05D008182 ORTHO05D001888 3.8e-11 73.2 141 31.2
BNapus_Darmor_BZH_scaffold_118p00010 Brassica napus HOM05D005742 ORTHO05D001888 3.8e-11 73.2 147 33.3
BraA01t04423Z Brassica rapa HOM05D005742 ORTHO05D001888 3.8e-11 73.2 147 33.3
AT2G47340 Arabidopsis thaliana HOM05D026554 ORTHO05D001888 6.5e-11 72.4 164 29.9
Hma1.2p1_0375F.1_g139000 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 8.5e-11 72.0 82 47.6
Hma1.2p1_0400F.1_g144500 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 8.5e-11 72.0 80 48.8
PGR083G2154 Punica granatum HOM05D008182 ORTHO05D001888 8.5e-11 72.0 150 32.0
CsaV3_4G001290 Cucumis sativus L. HOM05D005742 ORTHO05D001888 1.1e-10 71.6 170 28.2
QL12p019526 Quercus lobata HOM05D005742 ORTHO05D001888 1.1e-10 71.6 134 29.1
Zm00001eb136950 Zea mays HOM05D005742 ORTHO05D001888 1.1e-10 71.6 149 30.2
Actinidia13362 Actinidia chinensis HOM05D005742 ORTHO05D001888 1.4e-10 71.2 113 34.5
Carub.0003s0617 Capsella rubella HOM05D005742 ORTHO05D001888 1.9e-10 70.9 188 34.0
AL4G46900 Arabidopsis lyrata HOM05D026554 ORTHO05D001888 4.2e-10 69.7 231 27.7
AT3G36659 Arabidopsis thaliana HOM05D005742 ORTHO05D001888 4.2e-10 69.7 184 33.2
Hma1.2p1_0419F.1_g149380 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 4.2e-10 69.7 82 45.1
Potri.014G119400 Populus trichocarpa HOM05D008182 ORTHO05D001888 4.2e-10 69.7 145 27.6
THA.LOC104818886 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 5.5e-10 69.3 287 26.1
Zm00001eb028480 Zea mays HOM05D005742 ORTHO05D001888 5.5e-10 69.3 149 31.5
Gohir.A11G108900 Gossypium hirsutum HOM05D008182 ORTHO05D001888 9.4e-10 68.6 145 27.6
Hma1.2p1_0170F.1_g075030 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 9.4e-10 68.6 82 43.9
Sabra14G0088500 Salix brachista HOM05D008182 ORTHO05D001888 1.2e-09 68.2 145 28.3
ClCG10G011490 Citrullus lanatus HOM05D005742 ORTHO05D001888 2.1e-09 67.4 219 29.7
Duzib251G0841 Durio zibethinus HOM05D008070 ORTHO05D001888 2.1e-09 67.4 142 33.1
CARHR081260 Cardamine hirsuta HOM05D005742 ORTHO05D001888 2.7e-09 67.0 195 31.3
Medtr2g034220 Medicago truncatula HOM05D005742 ORTHO05D001888 2.7e-09 67.0 151 31.1
Gohir.A09G224750 Gossypium hirsutum HOM05D008182 ORTHO05D001888 3.6e-09 66.6 152 27.0
THA.LOC104817455 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 6.1e-09 65.9 257 26.8
Gohir.D08G140500 Gossypium hirsutum HOM05D008182 ORTHO05D001888 1.4e-08 64.7 149 26.8
Gohir.D09G226500 Gossypium hirsutum HOM05D008182 ORTHO05D001888 1.4e-08 64.7 145 27.6
Gorai.004G144600 Gossypium raimondii HOM05D008182 ORTHO05D001888 1.4e-08 64.7 149 26.8
LjContig00081g0023529 Lotus japonicus HOM05D005742 ORTHO05D001888 1.4e-08 64.7 159 26.4
Psat1g160600 Pisum sativum HOM05D005742 ORTHO05D001888 1.4e-08 64.7 231 31.2
AL1G11880 Arabidopsis lyrata HOM05D008182 ORTHO05D001888 1.8e-08 64.3 146 30.1
TWI36G0098 Tripterygium wilfordii HOM05D008070 ORTHO05D001888 1.8e-08 64.3 138 30.4
arahy.Tifrunner.gnm1.ann1.X5UH65 Arachis hypogaea HOM05D005742 ORTHO05D001888 2.3e-08 63.9 257 24.9
Gohir.A11G109000 Gossypium hirsutum HOM05D008182 ORTHO05D001888 2.3e-08 63.9 211 27.5
Thhalv10022426m.g Eutrema salsugineum HOM05D005742 ORTHO05D001888 3.9e-08 63.2 213 28.6
Gorai.006G248100 Gossypium raimondii HOM05D008182 ORTHO05D001888 3.9e-08 63.2 145 27.6
MD03G1299200 Malus domestica HOM05D005742 ORTHO05D001888 3.9e-08 63.2 172 27.3
MELO3C017910.2 Cucumis melo HOM05D005742 ORTHO05D001888 8.8e-08 62.0 238 26.9
CsaV3_2G024840 Cucumis sativus L. HOM05D008070 ORTHO05D001888 1.1e-07 61.6 136 28.7
Glyma.02G011500 Glycine max HOM05D008489 ORTHO05D010677 1.5e-07 61.2 148 27.0
Gohir.D11G113400 Gossypium hirsutum HOM05D008182 ORTHO05D001888 1.5e-07 61.2 213 26.8
AT1G02550 Arabidopsis thaliana HOM05D008182 ORTHO05D001888 2.0e-07 60.8 157 28.0
CDE06G2294 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 2.0e-07 60.8 183 27.3
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 2.0e-07 60.8 143 26.6
Gorai.007G122100 Gossypium raimondii HOM05D008182 ORTHO05D001888 2.6e-07 60.5 211 24.6
Lalb_Chr15g0089211 Lupinus albus HOM05D005742 ORTHO05D001888 2.6e-07 60.5 123 31.7
Lalb_Chr15g0089221 Lupinus albus HOM05D005742 ORTHO05D001888 2.6e-07 60.5 123 31.7
Rhsim01G0293400 Rhododendron simsii HOM05D008182 ORTHO05D001888 2.6e-07 60.5 152 28.3
CARHR142730 Cardamine hirsuta HOM05D026554 ORTHO05D001888 3.3e-07 60.1 249 25.3
Gohir.A09G224700 Gossypium hirsutum HOM05D008182 ORTHO05D001888 4.4e-07 59.7 174 27.0
Aa31LG1G9980 Aethionema arabicum HOM05D008182 ORTHO05D001888 5.7e-07 59.3 228 25.4
arahy.Tifrunner.gnm1.ann1.4I2GBK Arachis hypogaea HOM05D008489 ORTHO05D010677 5.7e-07 59.3 187 27.3
Carub.0003s0619 Capsella rubella HOM05D005742 ORTHO05D001888 5.7e-07 59.3 141 32.6
CARHR001860 Cardamine hirsuta HOM05D008182 ORTHO05D001888 5.7e-07 59.3 157 27.4
Gohir.D11G113500 Gossypium hirsutum HOM05D008182 ORTHO05D001888 5.7e-07 59.3 220 24.5
VMungo0720G2810 Vigna mungo HOM05D008489 ORTHO05D010677 5.7e-07 59.3 148 26.4
VMungo1383G1128 Vigna mungo HOM05D008489 ORTHO05D010677 5.7e-07 59.3 164 28.7
Atru.chr11.2085 Acer truncatum HOM05D008070 ORTHO05D001888 7.4e-07 58.9 151 31.1
Atru.chr11.2086 Acer truncatum HOM05D008070 ORTHO05D001888 7.4e-07 58.9 151 31.1
Carub.0001s0161 Capsella rubella HOM05D008182 ORTHO05D001888 7.4e-07 58.9 157 28.7
Cpa.g.sc18.59 Carica papaya HOM05D008182 ORTHO05D001888 9.7e-07 58.5 234 27.4
ATR0796G103 Amborella trichopoda HOM05D005742 ORTHO05D001888 1.3e-06 58.2 162 26.5
CANSAT01G1404 Cannabis sativa HOM05D008070 ORTHO05D001888 1.3e-06 58.2 140 28.6
COL.COLO4_34630 Corchorus olitorius HOM05D005742 ORTHO05D001888 1.3e-06 58.2 176 27.3
Hma1.2p1_0178F.1_g078280 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 1.3e-06 58.2 59 52.5
Hma1.2p1_0178F.1_g078313 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 1.3e-06 58.2 59 52.5
arahy.Tifrunner.gnm1.ann1.E1ZLD6 Arachis hypogaea HOM05D008489 ORTHO05D010677 1.7e-06 57.8 187 26.7
CDE07G0552 Ceratophyllum demersum HOM05D001445 ORTHO05D003404 1.7e-06 57.8 147 26.5
MELO3C010682.2 Cucumis melo HOM05D008070 ORTHO05D001888 1.7e-06 57.8 136 27.2
CANSAT25G2213 Cannabis sativa HOM05D005742 ORTHO05D001888 2.8e-06 57.0 128 29.7
ECA248G1830 Erigeron canadensis HOM05D005742 ORTHO05D001888 2.8e-06 57.0 137 29.9
Gohir.D09G222700 Gossypium hirsutum HOM05D008182 ORTHO05D001888 3.7e-06 56.6 190 28.4
Gorai.006G244000 Gossypium raimondii HOM05D008182 ORTHO05D001888 3.7e-06 56.6 190 28.4
CDE07G0112 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 4.8e-06 56.2 181 27.6
ATR1149G037 Amborella trichopoda HOM05D003556 ORTHO05D003404 6.3e-06 55.8 149 30.2
ClCG08G017790 Citrullus lanatus HOM05D008070 ORTHO05D001888 6.3e-06 55.8 142 28.2
Phvul.007G213550 Phaseolus vulgaris HOM05D008489 ORTHO05D010677 8.2e-06 55.5 148 26.4


User provided reference genes

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