Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 3.3e-80 301.6 145 100.0
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 1.3e-49 199.9 102 88.2
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 1.2e-45 186.8 102 81.4
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 3.4e-45 185.3 100 84.0
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 2.4e-43 179.1 102 77.5
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.7e-41 172.9 108 76.9
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 4.5e-37 158.3 88 80.7
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 3.0e-33 145.6 102 61.8
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 9.6e-32 140.6 103 60.2
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 2.8e-31 139.0 103 59.2
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.1e-30 137.1 103 60.2
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 1.1e-30 137.1 103 59.2
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 1.1e-30 137.1 103 58.3
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 2.4e-30 136.0 103 58.3
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 2.4e-30 136.0 103 57.3
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 3.1e-30 135.6 103 58.3
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 4.0e-30 135.2 103 58.3
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 5.3e-30 134.8 98 61.2
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 6.9e-30 134.4 103 57.3
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 9.0e-30 134.0 99 59.6
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 9.0e-30 134.0 96 61.5
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 1.2e-29 133.7 103 57.3
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 1.2e-29 133.7 95 61.1
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 2.0e-29 132.9 102 57.8
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 2.0e-29 132.9 103 56.3
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 2.6e-29 132.5 103 57.3
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 2.6e-29 132.5 103 58.3
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 4.5e-29 131.7 104 57.7
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 4.5e-29 131.7 104 57.7
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 5.8e-29 131.3 102 56.9
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 9.9e-29 130.6 103 57.3
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 9.9e-29 130.6 103 57.3
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 9.9e-29 130.6 103 57.3
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 9.9e-29 130.6 103 57.3
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 9.9e-29 130.6 103 56.3
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 9.9e-29 130.6 102 55.9
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 1.3e-28 130.2 97 57.7
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 1.7e-28 129.8 103 55.3
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 3.8e-28 128.6 101 56.4
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 3.8e-28 128.6 89 62.9
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 3.8e-28 128.6 103 55.3
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 3.8e-28 128.6 96 58.3
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 4.9e-28 128.3 103 56.3
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 1.1e-27 127.1 95 58.9
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 1.4e-27 126.7 92 59.8
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 1.4e-27 126.7 103 52.4
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 1.4e-27 126.7 96 54.2
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 1.9e-27 126.3 102 54.9
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 2.4e-27 125.9 101 57.4
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 4.2e-27 125.2 102 55.9
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 5.5e-27 124.8 105 54.3
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 5.5e-27 124.8 102 53.9
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 5.5e-27 124.8 103 54.4
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 9.3e-27 124.0 96 56.2
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 9.3e-27 124.0 103 55.3
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 1.2e-26 123.6 98 54.1
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 1.2e-26 123.6 96 55.2
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 1.6e-26 123.2 96 57.3
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 1.6e-26 123.2 96 57.3
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 1.6e-26 123.2 98 53.1
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 1.6e-26 123.2 98 53.1
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.6e-26 123.2 94 58.5
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 2.1e-26 122.9 106 55.7
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 2.7e-26 122.5 95 54.7
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 3.5e-26 122.1 96 56.2
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 4.6e-26 121.7 96 54.2
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 4.6e-26 121.7 98 55.1
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 4.6e-26 121.7 100 56.0
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 1.0e-25 120.6 96 56.2
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 1.0e-25 120.6 103 52.4
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 1.8e-25 119.8 98 54.1
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 3.0e-25 119.0 83 62.7
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 3.9e-25 118.6 101 54.5
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 5.1e-25 118.2 102 52.0
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 6.7e-25 117.9 98 53.1
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 6.7e-25 117.9 103 50.5
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 8.7e-25 117.5 98 52.0
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 8.7e-25 117.5 103 52.4
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 5.6e-24 114.8 98 51.0
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 7.4e-24 114.4 111 47.7
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 2.1e-23 112.8 101 52.5
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 2.1e-23 112.8 101 52.5
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 2.1e-23 112.8 103 51.5
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 3.7e-23 112.1 95 53.7
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 3.7e-23 112.1 95 53.7
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 6.2e-23 111.3 62 71.0
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 6.2e-23 111.3 55 76.4
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 1.1e-22 110.5 98 48.0
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 3.1e-22 109.0 115 45.2
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 9.0e-22 107.5 102 46.1
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 9.0e-22 107.5 97 53.6
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 1.2e-21 107.1 85 54.1
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 1.3e-20 103.6 98 48.0
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 2.2e-20 102.8 83 54.2
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 3.8e-20 102.1 90 50.0
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 4.9e-20 101.7 98 46.9
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 1.9e-19 99.8 122 43.4
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 1.9e-19 99.8 91 49.5
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 4.2e-19 98.6 74 55.4
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 7.1e-19 97.8 101 47.5
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 7.1e-19 97.8 101 47.5
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 9.3e-19 97.4 93 46.2
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 6.0e-18 94.7 89 49.4
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 1.3e-17 93.6 46 76.1
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 1.9e-16 89.7 90 47.8
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 2.5e-16 89.4 98 41.8
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 4.3e-16 88.6 45 77.8
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 5.5e-11 71.6 119 34.5
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 2.8e-07 59.3 103 32.0


User provided reference genes

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