Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.8e-153 545.8 270 100.0
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.2e-122 442.6 278 82.7
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 8.4e-106 387.5 278 73.7
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 8.1e-101 370.9 281 72.2
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 6.9e-92 341.3 291 64.3
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 6.7e-87 324.7 289 62.6
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 1.3e-85 320.5 284 61.3
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 3.7e-85 318.9 287 61.3
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 9.0e-84 314.3 291 61.9
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 3.7e-69 265.8 234 59.8
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 3.5e-67 259.2 237 58.6
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 2.5e-65 253.1 188 66.5
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 2.5e-65 253.1 231 59.7
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 4.2e-65 252.3 236 56.4
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 9.4e-65 251.1 208 60.6
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 1.6e-64 250.4 231 59.7
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 2.7e-64 249.6 185 66.5
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 4.7e-64 248.8 239 54.8
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 1.4e-63 247.3 237 56.1
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 4.0e-63 245.7 267 49.4
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 4.0e-63 245.7 267 49.4
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 6.7e-63 245.0 228 61.4
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 8.8e-63 244.6 247 55.5
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 8.8e-63 244.6 238 56.7
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 8.8e-63 244.6 282 51.8
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 1.5e-62 243.8 256 51.2
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 2.6e-62 243.0 277 50.5
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 4.4e-62 242.3 277 50.5
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 7.4e-62 241.5 192 62.0
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 7.4e-62 241.5 224 56.2
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 7.4e-62 241.5 277 51.6
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 9.7e-62 241.1 241 56.0
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 1.3e-61 240.7 203 61.1
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 4.8e-61 238.8 188 62.8
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 1.8e-60 236.9 194 63.4
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 2.4e-60 236.5 186 64.0
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 3.1e-60 236.1 201 60.7
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 3.1e-60 236.1 231 55.4
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 4.1e-60 235.7 203 60.6
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 5.3e-60 235.3 246 54.9
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 5.3e-60 235.3 243 55.6
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 5.3e-60 235.3 238 53.4
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 9.1e-60 234.6 234 55.1
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 9.1e-60 234.6 246 49.6
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 1.2e-59 234.2 238 53.8
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.6e-59 233.8 231 55.8
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.0e-59 233.4 231 54.5
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 2.6e-59 233.0 187 62.6
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 2.6e-59 233.0 247 49.4
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 3.5e-59 232.6 184 62.5
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 3.5e-59 232.6 193 62.2
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 3.5e-59 232.6 246 52.0
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 4.5e-59 232.3 238 52.5
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 4.5e-59 232.3 215 56.3
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 4.5e-59 232.3 251 53.4
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 5.9e-59 231.9 215 56.3
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 5.9e-59 231.9 220 59.1
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.0e-58 231.1 231 54.5
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.0e-58 231.1 233 54.9
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.7e-58 230.3 231 54.5
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 1.7e-58 230.3 216 57.4
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 2.2e-58 229.9 241 52.7
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 2.2e-58 229.9 234 54.3
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 2.2e-58 229.9 188 60.1
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 3.8e-58 229.2 240 53.3
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 3.2e-57 226.1 189 59.3
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 4.2e-57 225.7 218 54.6
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 2.1e-56 223.4 194 57.7
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 8.0e-56 221.5 189 63.0
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 1.0e-55 221.1 184 61.4
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 1.5e-54 217.2 234 51.3
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 2.0e-54 216.9 180 59.4
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 2.6e-54 216.5 229 50.2
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 7.5e-54 214.9 229 50.2
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 7.5e-54 214.9 229 50.2
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 1.7e-53 213.8 231 50.6
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 6.3e-53 211.8 199 54.3
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 8.3e-53 211.5 197 54.3
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 1.8e-52 210.3 240 47.1
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 2.4e-52 209.9 199 53.8
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 9.1e-52 208.0 231 49.8
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 9.1e-52 208.0 240 47.5
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 1.2e-51 207.6 188 57.4
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 2.0e-51 206.8 249 49.4
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 2.0e-51 206.8 229 48.0
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 3.5e-51 206.1 199 53.3
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 7.7e-51 204.9 197 53.3
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 7.7e-51 204.9 253 46.2
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 1.0e-50 204.5 158 60.1
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 1.3e-50 204.1 187 55.6
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 2.9e-50 203.0 244 50.4
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 3.8e-50 202.6 238 45.8
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 1.9e-49 200.3 187 54.5
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.9e-49 200.3 243 46.5
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 3.2e-49 199.5 212 54.2
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 2.1e-48 196.8 241 46.5
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 2.7e-43 179.9 144 61.1
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 3.5e-43 179.5 146 61.6
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 5.9e-43 178.7 185 49.2
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 2.3e-42 176.8 207 46.9
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 1.1e-36 157.9 111 68.5
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 1.2e-32 144.4 224 41.1
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 2.1e-32 143.7 277 37.2
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 5.2e-31 139.0 147 55.1
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 5.8e-30 135.6 131 54.2
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 7.5e-30 135.2 146 52.7
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 9.8e-30 134.8 173 44.5
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 4.9e-29 132.5 116 59.5
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 1.3e-26 124.4 141 51.1
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 5.0e-26 122.5 163 46.6
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.4e-23 114.4 128 51.6
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 1.8e-23 114.0 168 41.1
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 4.0e-23 112.8 123 52.8
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 6.8e-23 112.1 140 45.0
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.5e-22 110.9 111 53.2
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 8.3e-21 105.1 114 44.7
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 7.1e-20 102.1 126 46.8
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 5.1e-18 95.9 95 55.8
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 4.9e-13 79.3 76 52.6
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 1.1e-12 78.2 121 41.3
MCO16G519 Micromonas commoda HOM05D006270 ORTHO05D007755 1.1e-07 61.6 85 36.5
SEGI_16930 Sequoiadendron giganteum HOM05D005733 ORTHO05D007442 3.1e-07 60.1 88 33.0
Cre16.g657150 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 1.2e-06 58.2 81 44.4
Ca_21184_v3 Cicer arietinum L. HOM05D005733 ORTHO05D007442 2.0e-06 57.4 78 32.1
SEGI_09763 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 4.4e-06 56.2 64 50.0
Psat4g048120 Pisum sativum HOM05D005733 ORTHO05D007442 5.8e-06 55.8 78 30.8
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 9.9e-06 55.1 90 34.4


User provided reference genes

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