Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000167g0040 Nicotiana tabacum HOM05D004866 ORTHO05D005716 7.3e-184 647.1 334 100.0
Nitab4.5_0001579g0120 Nicotiana tabacum HOM05D004866 ORTHO05D005716 1.2e-170 603.2 330 95.2
CAN.G2.14 Capsicum annuum HOM05D004866 ORTHO05D005716 5.6e-160 567.8 330 87.9
Peaxi162Scf01013g00127 Petunia axillaris HOM05D004866 ORTHO05D005716 1.3e-159 566.6 330 87.9
Solyc11g019920.2 Solanum lycopersicum HOM05D004866 ORTHO05D005716 3.4e-157 558.5 330 87.6
PGSC0003DMG400027609 Solanum tuberosum HOM05D004866 ORTHO05D005716 4.4e-157 558.1 330 87.9
Sopen11g010040 Solanum pennellii HOM05D004866 ORTHO05D005716 9.9e-157 557.0 330 87.3
Peaxi162Scf00268g01017 Petunia axillaris HOM05D004866 ORTHO05D005716 1.7e-148 529.6 330 80.3
Nitab4.5_0006657g0010 Nicotiana tabacum HOM05D004866 ORTHO05D005716 1.4e-147 526.6 334 78.7
Nitab4.5_0000303g0220 Nicotiana tabacum HOM05D004866 ORTHO05D005716 7.9e-146 520.8 334 77.8
Sopen06g023810 Solanum pennellii HOM05D004866 ORTHO05D005716 6.9e-142 507.7 334 76.0
CAN.G199.2 Capsicum annuum HOM05D004866 ORTHO05D005716 1.4e-139 500.0 326 76.4
PGSC0003DMG400026074 Solanum tuberosum HOM05D004866 ORTHO05D005716 6.7e-137 491.1 381 67.7
Dinv15070 Davidia involucrata HOM05D004866 ORTHO05D005716 1.5e-133 479.9 331 73.4
Actinidia02574 Actinidia chinensis HOM05D004866 ORTHO05D005716 6.3e-127 458.0 331 68.6
CSS0004253 Camellia sinensis var. sinensis HOM05D004866 ORTHO05D005716 6.3e-127 458.0 331 69.5
Lj7C291G3 Lonicera japonica HOM05D004866 ORTHO05D005716 1.0e-124 450.7 331 71.0
Rhsim11G0058000 Rhododendron simsii HOM05D004866 ORTHO05D005716 1.4e-123 446.8 331 66.8
Rhsim11G0058200 Rhododendron simsii HOM05D004866 ORTHO05D005716 1.4e-123 446.8 331 66.8
Cc01_g05780 Coffea canephora HOM05D004866 ORTHO05D005716 6.1e-122 441.4 331 67.4
CiPaw.08G058600 Carya illinoinensis HOM05D004866 ORTHO05D005716 7.9e-122 441.0 333 67.3
Oeu021211.1 Olea europaea HOM05D004866 ORTHO05D005716 1.8e-121 439.9 331 68.3
Cfa013842 Carpinus fangiana HOM05D004866 ORTHO05D005716 3.3e-120 435.6 331 66.2
TAR624G1235 Trochodendron aralioides HOM05D004866 ORTHO05D005716 1.7e-119 433.3 335 65.7
TAR628G0891 Trochodendron aralioides HOM05D004866 ORTHO05D005716 4.8e-119 431.8 336 65.8
Haze_22514 Corylus avellana HOM05D004866 ORTHO05D005716 2.4e-118 429.5 330 65.5
AUR62022699 Chenopodium quinoa HOM05D004866 ORTHO05D005716 1.5e-117 426.8 326 64.1
SGA_v2.0_scaffold118G32495 Striga asiatica HOM05D004866 ORTHO05D005716 2.0e-117 426.4 330 64.2
AUR62004637 Chenopodium quinoa HOM05D004866 ORTHO05D005716 2.6e-117 426.0 326 63.5
Eucgr.C02238 Eucalyptus grandis HOM05D004866 ORTHO05D005716 2.6e-117 426.0 331 65.3
Thecc.08G185100 Theobroma cacao HOM05D004866 ORTHO05D005716 3.4e-117 425.6 332 63.3
TWI60G1141 Tripterygium wilfordii HOM05D004866 ORTHO05D005716 3.4e-117 425.6 334 64.7
Manes.02G192700 Manihot esculenta HOM05D004866 ORTHO05D005716 4.5e-117 425.2 331 65.0
PSO017G5284 Papaver somniferum HOM05D004866 ORTHO05D005716 5.9e-117 424.9 335 62.7
FAN04G1244 Fragaria x ananassa HOM05D004866 ORTHO05D005716 2.2e-116 422.9 332 64.2
EL10Ac1g00092 Beta vulgaris HOM05D004866 ORTHO05D005716 2.9e-116 422.5 326 62.9
FvH4_5g30970 Fragaria vesca HOM05D004866 ORTHO05D005716 6.5e-116 421.4 332 64.2
Potri.013G111400 Populus trichocarpa HOM05D004866 ORTHO05D005716 6.5e-116 421.4 331 64.7
Ah.05g178220 Amaranthus hybridus HOM05D004866 ORTHO05D005716 8.5e-116 421.0 326 62.6
Sabra19G0093900 Salix brachista HOM05D004866 ORTHO05D005716 8.5e-116 421.0 331 63.1
FAN08G2315 Fragaria x ananassa HOM05D004866 ORTHO05D005716 1.1e-115 420.6 332 63.9
FAN13G0537 Fragaria x ananassa HOM05D004866 ORTHO05D005716 1.9e-115 419.9 332 63.6
FAN18G3952 Fragaria x ananassa HOM05D004866 ORTHO05D005716 1.9e-115 419.9 332 63.9
FAN04G1967 Fragaria x ananassa HOM05D004866 ORTHO05D005716 2.5e-115 419.5 332 63.9
PGR042G1785 Punica granatum HOM05D004866 ORTHO05D005716 3.2e-115 419.1 333 63.1
Potri.019G082400 Populus trichocarpa HOM05D004866 ORTHO05D005716 7.2e-115 417.9 331 63.4
MSTRG.1528 Avicennia marina HOM05D004866 ORTHO05D005716 9.4e-115 417.5 329 65.3
Solyc06g065320.4 Solanum lycopersicum HOM05D004866 ORTHO05D005716 2.1e-114 416.4 242 82.6
MD08G1220700 Malus domestica HOM05D004866 ORTHO05D005716 2.7e-114 416.0 332 61.7
MD09G1249700 Malus domestica HOM05D004866 ORTHO05D005716 2.7e-114 416.0 332 61.7
MD15G1411400 Malus domestica HOM05D004866 ORTHO05D005716 4.7e-114 415.2 332 62.0
Migut.C01261 Erythranthe guttata HOM05D004866 ORTHO05D005716 7.9e-114 414.5 306 65.4
TWI34G1187 Tripterygium wilfordii HOM05D004866 ORTHO05D005716 1.0e-113 414.1 333 62.8
Ciclev10001144m.g Citrus clementina HOM05D004866 ORTHO05D005716 1.4e-113 413.7 332 61.7
SalBow7G0145 Salvia bowleyana HOM05D004866 ORTHO05D005716 1.4e-113 413.7 331 62.5
Prupe.1G557400 Prunus persica HOM05D004866 ORTHO05D005716 2.3e-113 412.9 332 62.0
Thecc.08G184800 Theobroma cacao HOM05D004866 ORTHO05D005716 3.9e-113 412.1 319 63.3
Duzib211G0074 Durio zibethinus HOM05D004866 ORTHO05D005716 5.1e-113 411.8 330 62.4
CANSAT25G2412 Cannabis sativa HOM05D004866 ORTHO05D005716 8.8e-113 411.0 333 62.5
RcHm_v2.0_Chr7g0226321 Rosa chinensis HOM05D004866 ORTHO05D005716 3.3e-112 409.1 332 62.0
MSTRG.22459 Avicennia marina HOM05D004866 ORTHO05D005716 9.7e-112 407.5 331 63.4
Gorai.006G130600 Gossypium raimondii HOM05D004866 ORTHO05D005716 2.8e-111 406.0 319 61.1
Gohir.A09G116000 Gossypium hirsutum HOM05D004866 ORTHO05D005716 8.2e-111 404.4 319 61.1
ECA247G2093 Erigeron canadensis HOM05D004866 ORTHO05D005716 1.1e-110 404.1 327 61.8
CiPaw.07G160700 Carya illinoinensis HOM05D004866 ORTHO05D005716 1.4e-110 403.7 330 63.0
Duzib211G0502 Durio zibethinus HOM05D004866 ORTHO05D005716 1.8e-110 403.3 319 62.1
Atru.chr13.1733 Acer truncatum HOM05D004866 ORTHO05D005716 2.4e-110 402.9 336 61.3
Gohir.D09G113100 Gossypium hirsutum HOM05D004866 ORTHO05D005716 2.4e-110 402.9 319 61.1
MBI09_g41429_MAGBIO Magnolia biondii HOM05D004866 ORTHO05D005716 1.2e-109 400.6 332 60.5
HanXRQChr02g0044281 Helianthus annuus HOM05D004866 ORTHO05D005716 4.5e-109 398.7 327 61.2
GSVIVG01034781001 Vitis vinifera HOM05D004866 ORTHO05D005716 4.5e-109 398.7 263 72.6
ATR0752G218 Amborella trichopoda HOM05D004866 ORTHO05D005716 7.7e-109 397.9 333 59.2
SGA_v2.0_scaffold24G10559 Striga asiatica HOM05D004866 ORTHO05D005716 7.7e-109 397.9 321 62.9
Lsat_1_v5_gn_1_12401 Lactuca sativa HOM05D004866 ORTHO05D005716 2.2e-108 396.4 331 61.0
Aqoxy5G02452 Aquilegia oxysepala HOM05D004866 ORTHO05D005716 2.5e-107 392.9 333 59.2
ClCG11G008070 Citrullus lanatus HOM05D004866 ORTHO05D005716 2.5e-107 392.9 335 58.5
MELO3C008127.2 Cucumis melo HOM05D004866 ORTHO05D005716 4.2e-107 392.1 335 58.2
Migut.N03354 Erythranthe guttata HOM05D004866 ORTHO05D005716 2.1e-106 389.8 335 60.6
CsaV3_2G033540 Cucumis sativus L. HOM05D004866 ORTHO05D005716 2.7e-106 389.4 335 57.9
unitig_0.g2131 Utricularia gibba HOM05D004866 ORTHO05D005716 2.3e-105 386.3 333 60.7
THA.LOC104816334 Tarenaya hassleriana HOM05D004866 ORTHO05D005716 2.6e-104 382.9 339 56.6
DCAR_001057 Daucus carota HOM05D004866 ORTHO05D005716 5.7e-104 381.7 427 51.1
Hund16793 Selenicereus undatus HOM05D004866 ORTHO05D005716 5.7e-104 381.7 284 62.7
Dinv41717 Davidia involucrata HOM05D004866 ORTHO05D005716 1.3e-103 380.6 227 80.6
Lj5g0015319 Lotus japonicus HOM05D004866 ORTHO05D005716 2.8e-103 379.4 333 55.9
CDE04G2694 Ceratophyllum demersum HOM05D004866 ORTHO05D005716 3.7e-103 379.0 295 62.7
Sed0013291 Sechium edule HOM05D004866 ORTHO05D005716 3.7e-103 379.0 334 55.7
COL.COLO4_23639 Corchorus olitorius HOM05D004866 ORTHO05D005716 2.4e-102 376.3 334 59.3
Hma1.2p1_0251F.1_g102520 Hydrangea macrophylla HOM05D004866 ORTHO05D005716 7.0e-102 374.8 227 79.7
Lalb_Chr06g0161961 Lupinus albus HOM05D004866 ORTHO05D005716 2.7e-101 372.9 332 55.1
BcaB03g13658 Brassica carinata HOM05D004866 ORTHO05D005716 4.5e-101 372.1 329 57.8
CARHR034420 Cardamine hirsuta HOM05D004866 ORTHO05D005716 1.0e-100 370.9 312 59.6
Carub.0001s3321 Capsella rubella HOM05D004866 ORTHO05D005716 1.7e-100 370.2 334 57.5
AT1G35620 Arabidopsis thaliana HOM05D004866 ORTHO05D005716 2.2e-100 369.8 336 57.1
C05p37040 Brassica napus HOM05D004866 ORTHO05D005716 2.2e-100 369.8 334 56.6
SalBow6G2673 Salvia bowleyana HOM05D004866 ORTHO05D005716 2.2e-100 369.8 282 63.8
vmacro12483 Vaccinium macrocarpon HOM05D004866 ORTHO05D005716 2.2e-100 369.8 227 77.1
Thhalv10010385m.g Eutrema salsugineum HOM05D004866 ORTHO05D005716 2.9e-100 369.4 334 56.9
HPP92_019370 Vanilla planifolia HOM05D004866 ORTHO05D005716 3.8e-100 369.0 338 55.0
A05p23590 Brassica napus HOM05D004866 ORTHO05D005716 5.0e-100 368.6 329 57.4
BolC5t32456H Brassica oleracea HOM05D004866 ORTHO05D005716 5.0e-100 368.6 329 57.4
BraA05t21227Z Brassica rapa HOM05D004866 ORTHO05D005716 5.0e-100 368.6 329 57.4
HanXRQChr04g0109621 Helianthus annuus HOM05D004866 ORTHO05D005716 5.0e-100 368.6 328 58.5
QL02p033402 Quercus lobata HOM05D004866 ORTHO05D005716 5.0e-100 368.6 478 45.0
BcaC05g27723 Brassica carinata HOM05D004866 ORTHO05D005716 6.5e-100 368.2 329 57.1
Gorai.009G289400 Gossypium raimondii HOM05D004866 ORTHO05D005716 6.5e-100 368.2 335 56.4
SalBow1G5438 Salvia bowleyana HOM05D004866 ORTHO05D005716 6.5e-100 368.2 298 60.4
Gohir.D05G253300 Gossypium hirsutum HOM05D004866 ORTHO05D005716 1.9e-99 366.7 294 60.2
Gohir.D05G276400 Gossypium hirsutum HOM05D004866 ORTHO05D005716 1.9e-99 366.7 335 56.4
SHI09019 Sapria himalayana HOM05D004866 ORTHO05D005716 2.5e-99 366.3 283 61.1
Gorai.009G263700 Gossypium raimondii HOM05D004866 ORTHO05D005716 9.4e-99 364.4 294 59.5
Lalb_Chr02g0141731 Lupinus albus HOM05D004866 ORTHO05D005716 9.4e-99 364.4 332 54.5
Os04g0432500 Oryza sativa ssp. japonica HOM05D004866 ORTHO05D005716 1.6e-98 363.6 290 59.7
Aa31LG6G8820 Aethionema arabicum HOM05D004866 ORTHO05D005716 2.7e-98 362.8 330 56.4
Sc01g0001820 Simmondsia chinensis HOM05D004866 ORTHO05D005716 2.7e-98 362.8 227 77.1
Medtr1g096790 Medicago truncatula HOM05D004866 ORTHO05D005716 4.7e-98 362.1 334 54.8
Sp1g30340 Schrenkiella parvula HOM05D004866 ORTHO05D005716 1.4e-97 360.5 329 55.6
VMungo0720G1828 Vigna mungo HOM05D004866 ORTHO05D005716 1.8e-97 360.1 332 54.8
COL.COLO4_38510 Corchorus olitorius HOM05D004866 ORTHO05D005716 4.0e-97 359.0 399 48.1
TPR.G15688 Trifolium pratense HOM05D004866 ORTHO05D005716 5.2e-97 358.6 334 52.4
Phvul.007G088500 Phaseolus vulgaris HOM05D004866 ORTHO05D005716 1.2e-96 357.5 335 53.1
Ca_10624_v3 Cicer arietinum L. HOM05D002761 ORTHO05D005716 1.5e-96 357.1 326 55.5
Nn1g08376 Nelumbo nucifera HOM05D004866 ORTHO05D005716 2.0e-96 356.7 227 75.3
Glyma.10G217600 Glycine max HOM05D004866 ORTHO05D005716 2.6e-96 356.3 332 53.6
arahy.Tifrunner.gnm1.ann1.YL670A Arachis hypogaea HOM05D004866 ORTHO05D005716 9.8e-96 354.4 333 52.0
arahy.Tifrunner.gnm1.ann1.AKH03T Arachis hypogaea HOM05D004866 ORTHO05D005716 1.7e-95 353.6 333 52.0
Zm00001eb082680 Zea mays HOM05D004866 ORTHO05D005716 1.1e-94 350.9 290 57.9
Cpa.g.sc66.30 Carica papaya HOM05D004866 ORTHO05D005716 4.5e-93 345.5 226 70.8
Zm00001eb243460 Zea mays HOM05D004866 ORTHO05D005716 2.7e-90 336.3 291 58.4
Gohir.A05G274200 Gossypium hirsutum HOM05D004866 ORTHO05D005716 1.8e-89 333.6 239 64.9
Lalb_Chr03g0036111 Lupinus albus HOM05D004866 ORTHO05D005716 2.3e-89 333.2 350 50.0
Os02g0550300 Oryza sativa ssp. japonica HOM05D004866 ORTHO05D005716 4.0e-89 332.4 302 54.6
Zm00001eb422640 Zea mays HOM05D004866 ORTHO05D005716 5.4e-86 322.0 224 66.1
CDE02G1426 Ceratophyllum demersum HOM05D000012 ORTHO05D000540 8.6e-84 314.7 249 60.2
Oeu037757.1 Olea europaea HOM05D004866 ORTHO05D005716 8.6e-84 314.7 263 62.0
Aa31LG9G14850 Aethionema arabicum HOM05D004866 ORTHO05D005716 4.7e-82 308.9 292 52.1
RcHm_v2.0_Chr7g0226361 Rosa chinensis HOM05D004866 ORTHO05D005716 3.3e-67 259.6 171 71.3
Mapoly0010s0028 Marchantia polymorpha HOM05D004866 ORTHO05D005716 6.6e-60 235.3 330 38.5
Rhsim06G0094600 Rhododendron simsii HOM05D004866 ORTHO05D005716 3.6e-58 229.6 208 57.7
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 7.1e-54 215.3 209 56.5
CDE07G0979 Ceratophyllum demersum HOM05D004866 ORTHO05D005716 1.9e-51 207.2 137 69.3
CDE07G1470 Ceratophyllum demersum HOM05D004866 ORTHO05D005716 2.6e-48 196.8 172 62.8
Pp3c4_15240 Physcomitrium patens HOM05D004866 ORTHO05D005716 4.4e-48 196.1 233 40.3
Pp3c3_31600 Physcomitrium patens HOM05D004866 ORTHO05D005716 1.1e-46 191.4 284 35.9
Rhsim06G0094700 Rhododendron simsii HOM05D004866 ORTHO05D005716 9.3e-46 188.3 114 76.3
Gohir.A05G250450 Gossypium hirsutum HOM05D004866 ORTHO05D005716 5.3e-41 172.6 119 68.1
SMO347G0292 Selaginella moellendorffii HOM05D004866 ORTHO05D005716 1.9e-38 164.1 298 32.2
Gohir.A05G250501 Gossypium hirsutum HOM05D004866 ORTHO05D005716 1.0e-36 158.3 192 46.4
Oeu032986.1 Olea europaea HOM05D007524 ORTHO05D009475 7.4e-35 152.1 138 60.1
MELO3C032011.2 Cucumis melo HOM05D011747 ORTHO05D014199 2.8e-18 97.1 66 66.7
vmacro12484 Vaccinium macrocarpon HOM05D004866 ORTHO05D005716 4.2e-14 83.2 105 46.7
Cpa.g.sc66.31 Carica papaya HOM05D004866 ORTHO05D005716 1.1e-11 75.1 108 39.8
SGA_v2.0_scaffold118G32519 Striga asiatica HOM05D004866 ORTHO05D005716 1.8e-09 67.8 125 36.0
AagrBONN_evm.TU.Sc2ySwM_362.199 Anthoceros agrestis HOM05D000847 ORTHO05D003278 3.1e-09 67.0 172 28.5
Os02g0100100 Oryza sativa ssp. japonica HOM05D000847 ORTHO05D003278 3.1e-09 67.0 202 29.7
SMO356G0763 Selaginella moellendorffii HOM05D000847 ORTHO05D002691 4.1e-09 66.6 275 25.8
Aa31LG4G7540 Aethionema arabicum HOM05D000847 ORTHO05D002691 4.5e-08 63.2 266 23.7
AT1G21750 Arabidopsis thaliana HOM05D000847 ORTHO05D002691 5.0e-07 59.7 264 23.1
BcaC08g47604 Brassica carinata HOM05D000847 ORTHO05D002691 5.0e-07 59.7 266 24.8
Pp3c8_20170 Physcomitrium patens HOM05D000847 ORTHO05D003278 5.0e-07 59.7 213 23.0
Sed0018546 Sechium edule HOM05D004866 ORTHO05D005716 6.5e-07 59.3 100 35.0
Glyma.14G152000 Glycine max HOM05D000847 ORTHO05D002691 1.4e-06 58.2 267 25.1
Gorai.009G283800 Gossypium raimondii HOM05D000847 ORTHO05D002691 1.9e-06 57.8 151 28.5
Zm00001eb229180 Zea mays HOM05D000847 ORTHO05D003278 1.9e-06 57.8 201 27.4
AagrBONN_evm.TU.Sc2ySwM_362.2142 Anthoceros agrestis HOM05D000847 ORTHO05D002691 2.5e-06 57.4 268 23.1
Carub.0002s2440 Capsella rubella HOM05D000847 ORTHO05D002691 2.5e-06 57.4 268 24.3
Gohir.A05G269000 Gossypium hirsutum HOM05D000847 ORTHO05D002691 2.5e-06 57.4 151 28.5
SMO144G0167 Selaginella moellendorffii HOM05D000847 ORTHO05D003278 2.5e-06 57.4 203 28.6
TWI34G0025 Tripterygium wilfordii HOM05D000847 ORTHO05D002691 2.5e-06 57.4 269 24.2
Thhalv10018420m.g Eutrema salsugineum HOM05D000847 ORTHO05D002691 3.2e-06 57.0 267 23.6
Gohir.D05G270900 Gossypium hirsutum HOM05D000847 ORTHO05D002691 3.2e-06 57.0 151 28.5
Sp5g32680 Schrenkiella parvula HOM05D000847 ORTHO05D002691 3.2e-06 57.0 269 23.0
COL.COLO4_24706 Corchorus olitorius HOM05D000847 ORTHO05D002691 4.2e-06 56.6 267 23.6
Gohir.A05G236000 Gossypium hirsutum HOM05D000847 ORTHO05D002691 4.2e-06 56.6 153 29.4
Atru.chr13.1496 Acer truncatum HOM05D000847 ORTHO05D002691 5.5e-06 56.2 268 23.1
Carub.0001s2120 Capsella rubella HOM05D000847 ORTHO05D002691 5.5e-06 56.2 264 23.1
Manes.02G164800 Manihot esculenta HOM05D000847 ORTHO05D002691 5.5e-06 56.2 268 23.5
AL1G34950 Arabidopsis lyrata HOM05D000847 ORTHO05D002691 7.2e-06 55.8 264 22.3
AT1G77510 Arabidopsis thaliana HOM05D000847 ORTHO05D002691 7.2e-06 55.8 268 24.6
C06p51610 Brassica napus HOM05D000847 ORTHO05D002691 7.2e-06 55.8 267 24.7
BolC6t40179H Brassica oleracea HOM05D000847 ORTHO05D002691 7.2e-06 55.8 267 24.7
CANSAT25G3371 Cannabis sativa HOM05D000847 ORTHO05D002691 9.4e-06 55.5 151 30.5


User provided reference genes

Program Settings