Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000167g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.4e-43 179.1 81 100.0
Sopen11g019660 Solanum pennellii HOM05D000003 ORTHO05D000004 8.9e-11 70.1 74 39.2
QL05p062582 Quercus lobata HOM05D000003 ORTHO05D000004 4.9e-09 64.3 73 43.8
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-08 62.0 53 54.7
CiPaw.02G126800 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.1e-08 61.2 71 40.8
CAN.G144.16 Capsicum annuum HOM05D000181 ORTHO05D008575 5.4e-08 60.8 66 42.4
CiPaw.05G173100 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.4e-08 60.8 53 52.8
CiPaw.08G057000 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.4e-08 60.8 52 51.9
CiPaw.01G225900 Carya illinoinensis HOM05D000003 ORTHO05D000006 7.1e-08 60.5 53 50.9
QL04p046247 Quercus lobata HOM05D000003 ORTHO05D000006 7.1e-08 60.5 77 40.3
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 9.2e-08 60.1 80 35.0
PGSC0003DMG400032795 Solanum tuberosum HOM05D000003 ORTHO05D000004 9.2e-08 60.1 66 39.4
PGSC0003DMG400043524 Solanum tuberosum HOM05D008032 ORTHO05D000006 1.6e-07 59.3 65 38.5
QL04p049443 Quercus lobata HOM05D000279 ORTHO05D000957 2.7e-07 58.5 53 52.8
PGSC0003DMG400001135 Solanum tuberosum HOM05D000003 ORTHO05D000006 2.7e-07 58.5 73 38.4
CiPaw.16G055100 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.6e-07 57.8 79 34.2
CiPaw.06G060200 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.0e-07 57.4 53 47.2
CiPaw.07G008100 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.0e-07 57.4 61 45.9
CiPaw.12G097200 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.0e-07 57.4 53 47.2
QL06p035637 Quercus lobata HOM05D000141 ORTHO05D004993 7.8e-07 57.0 80 33.8
Sopen01g037960 Solanum pennellii HOM05D000003 ORTHO05D000004 7.8e-07 57.0 65 38.5
QL12p004923 Quercus lobata HOM05D000142 ORTHO05D003173 1.0e-06 56.6 74 36.5
Sopen11g009770 Solanum pennellii HOM05D000003 ORTHO05D000006 1.0e-06 56.6 65 35.4
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.0e-06 56.6 71 35.2
CiPaw.11G155500 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.3e-06 56.2 59 42.4
QL01p048324 Quercus lobata HOM05D002615 ORTHO05D002913 1.3e-06 56.2 72 37.5
CiPaw.03G101600 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.7e-06 55.8 72 37.5
QL04p042086 Quercus lobata HOM05D000003 ORTHO05D000006 1.7e-06 55.8 65 43.1
Sopen10g025380 Solanum pennellii HOM05D000003 ORTHO05D000006 1.7e-06 55.8 71 32.4
CiPaw.05G158600 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.3e-06 55.5 60 43.3
Sopen01g010010 Solanum pennellii HOM05D000003 ORTHO05D001349 2.3e-06 55.5 59 40.7
PGSC0003DMG400020312 Solanum tuberosum HOM05D000003 ORTHO05D000006 2.3e-06 55.5 55 38.2
CiPaw.15G041600 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.0e-06 55.1 58 46.6
CiPaw.01G031000 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.9e-06 54.7 58 46.6
CiPaw.02G049700 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.9e-06 54.7 58 46.6
CiPaw.09G047300 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.9e-06 54.7 63 39.7
CSS0013558 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.1e-06 54.3 53 45.3
CiPaw.06G068000 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.1e-06 54.3 58 41.4
CiPaw.06G165800 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.1e-06 54.3 58 43.1
QL02p047771 Quercus lobata HOM05D000003 ORTHO05D000006 5.1e-06 54.3 65 36.9
QL11p025188 Quercus lobata HOM05D000005 ORTHO05D000012 5.1e-06 54.3 66 37.9
CSS0032143 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.6e-06 53.9 61 41.0
CiPaw.01G254900 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.6e-06 53.9 58 39.7
CiPaw.06G024700 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.6e-06 53.9 58 43.1
CiPaw.11G196100 Carya illinoinensis HOM05D000024 ORTHO05D000006 6.6e-06 53.9 59 44.1
QL06p009415 Quercus lobata HOM05D001406 ORTHO05D000006 6.6e-06 53.9 74 35.1
QL06p026501 Quercus lobata HOM05D000003 ORTHO05D000006 6.6e-06 53.9 65 41.5
CSS0035318 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 8.6e-06 53.5 66 39.4
QL02p026579 Quercus lobata HOM05D003230 ORTHO05D003680 8.6e-06 53.5 72 38.9


User provided reference genes

Program Settings