Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000165g0050 Nicotiana tabacum HOM05D002350 ORTHO05D000091 2.5e-80 302.0 147 100.0
Nitab4.5_0001354g0030 Nicotiana tabacum HOM05D002350 ORTHO05D000091 2.5e-67 258.8 130 96.9
Solyc06g051190.3 Solanum lycopersicum HOM05D002350 ORTHO05D000091 3.6e-58 228.4 138 81.9
Sopen06g017040 Solanum pennellii HOM05D002350 ORTHO05D000091 3.6e-58 228.4 138 81.9
Peaxi162Scf00824g00113 Petunia axillaris HOM05D002350 ORTHO05D000091 2.4e-54 215.7 137 79.6
CAN.G160.38 Capsicum annuum HOM05D002350 ORTHO05D000091 1.5e-48 196.4 121 85.1
Dinv41662 Davidia involucrata HOM05D002350 ORTHO05D000091 1.8e-46 189.5 131 66.4
CSS0048603 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 5.9e-45 184.5 131 64.9
Actinidia32657 Actinidia chinensis HOM05D002350 ORTHO05D000091 5.0e-44 181.4 135 63.7
Lj4C392G1 Lonicera japonica HOM05D002350 ORTHO05D000091 2.0e-40 169.5 131 61.1
Rhsim03G0237500 Rhododendron simsii HOM05D002350 ORTHO05D000091 4.4e-40 168.3 129 64.3
Lj7C663T4 Lonicera japonica HOM05D002350 ORTHO05D000091 2.2e-39 166.0 131 61.1
vmacro06244 Vaccinium macrocarpon HOM05D002350 ORTHO05D000091 1.8e-38 162.9 136 63.2
Lj4C391G5 Lonicera japonica HOM05D002350 ORTHO05D000091 1.6e-37 159.8 130 59.2
COL.COLO4_34763 Corchorus olitorius HOM05D002350 ORTHO05D000091 4.5e-37 158.3 129 55.0
SGA_v2.0_scaffold501G52502 Striga asiatica HOM05D002350 ORTHO05D000091 1.0e-36 157.1 128 55.5
Sopen12g003370 Solanum pennellii HOM05D002350 ORTHO05D000091 1.7e-36 156.4 123 62.6
Cc06_g10350 Coffea canephora HOM05D002350 ORTHO05D000091 2.2e-36 156.0 128 57.0
Migut.N01382 Erythranthe guttata HOM05D002350 ORTHO05D000091 2.2e-36 156.0 129 58.1
HanXRQChr16g0507611 Helianthus annuus HOM05D002350 ORTHO05D000091 8.5e-36 154.1 128 57.0
Oeu064188.1 Olea europaea HOM05D002350 ORTHO05D000091 8.5e-36 154.1 127 58.3
PGSC0003DMG402000361 Solanum tuberosum HOM05D002350 ORTHO05D000091 8.5e-36 154.1 123 61.8
HanXRQChr16g0503771 Helianthus annuus HOM05D002350 ORTHO05D000091 1.1e-35 153.7 128 57.0
Lsat_1_v5_gn_5_144600 Lactuca sativa HOM05D002350 ORTHO05D000091 1.1e-35 153.7 129 60.5
Peaxi162Scf00665g00310 Petunia axillaris HOM05D002350 ORTHO05D000091 5.5e-35 151.4 131 58.8
Duzib168G2169 Durio zibethinus HOM05D002350 ORTHO05D000091 7.2e-35 151.0 131 55.0
HanXRQChr16g0503801 Helianthus annuus HOM05D002350 ORTHO05D000091 7.2e-35 151.0 131 55.7
Nitab4.5_0011131g0010 Nicotiana tabacum HOM05D002350 ORTHO05D000091 7.2e-35 151.0 125 59.2
Cfa003194 Carpinus fangiana HOM05D002350 ORTHO05D000091 9.4e-35 150.6 131 55.7
Nitab4.5_0000566g0160 Nicotiana tabacum HOM05D002350 ORTHO05D000091 9.4e-35 150.6 125 59.2
Atru.chr7.1447 Acer truncatum HOM05D002350 ORTHO05D000091 1.2e-34 150.2 131 56.5
Duzib168G1106 Durio zibethinus HOM05D002350 ORTHO05D000091 1.2e-34 150.2 131 53.4
Thecc.09G101800 Theobroma cacao HOM05D002350 ORTHO05D000091 2.1e-34 149.4 131 55.7
Cfa003192 Carpinus fangiana HOM05D002350 ORTHO05D000091 8.0e-34 147.5 131 54.2
Haze_25814 Corylus avellana HOM05D002350 ORTHO05D000091 8.0e-34 147.5 131 54.2
TAR624G0594 Trochodendron aralioides HOM05D002350 ORTHO05D000091 8.0e-34 147.5 121 59.5
CAN.G1642.9 Capsicum annuum HOM05D002350 ORTHO05D000091 1.0e-33 147.1 130 57.7
ECA234G0874 Erigeron canadensis HOM05D002350 ORTHO05D000091 1.4e-33 146.7 128 57.0
Cc06_g10360 Coffea canephora HOM05D002350 ORTHO05D000091 2.3e-33 146.0 138 54.3
Duzib150G1289 Durio zibethinus HOM05D002350 ORTHO05D000091 2.3e-33 146.0 129 52.7
MSTRG.10607 Avicennia marina HOM05D002350 ORTHO05D000091 8.8e-33 144.1 128 52.3
DCAR_018431 Daucus carota HOM05D002350 ORTHO05D000091 1.2e-32 143.7 131 56.5
PSO832G0190 Papaver somniferum HOM05D002350 ORTHO05D000091 2.0e-32 142.9 132 53.0
Nn8g39091 Nelumbo nucifera HOM05D002350 ORTHO05D000091 1.3e-31 140.2 123 56.9
TAR624G0664 Trochodendron aralioides HOM05D002350 ORTHO05D000091 2.2e-31 139.4 121 57.9
Haze_25813 Corylus avellana HOM05D002350 ORTHO05D000091 3.7e-31 138.7 129 53.5
C07p01760 Brassica napus HOM05D002350 ORTHO05D000091 6.3e-31 137.9 130 49.2
arahy.Tifrunner.gnm1.ann1.2RFB5Y Arachis hypogaea HOM05D002350 ORTHO05D000091 1.8e-30 136.3 121 52.9
BraA07t27873Z Brassica rapa HOM05D002350 ORTHO05D000091 1.8e-30 136.3 136 47.1
ECA236G2339 Erigeron canadensis HOM05D002350 ORTHO05D000091 1.8e-30 136.3 129 51.9
BcaC06g36656 Brassica carinata HOM05D002350 ORTHO05D000091 2.4e-30 136.0 130 48.5
BolC7t40580H Brassica oleracea HOM05D002350 ORTHO05D000091 2.4e-30 136.0 130 48.5
Migut.K00531 Erythranthe guttata HOM05D002350 ORTHO05D000091 2.4e-30 136.0 128 50.0
Ciclev10007331m.g Citrus clementina HOM05D002350 ORTHO05D000091 4.1e-30 135.2 135 51.1
arahy.Tifrunner.gnm1.ann1.7X0VYH Arachis hypogaea HOM05D002350 ORTHO05D000091 9.1e-30 134.0 121 52.1
DCAR_010692 Daucus carota HOM05D002350 ORTHO05D000091 9.1e-30 134.0 124 54.0
GSVIVG01015313001 Vitis vinifera HOM05D002350 ORTHO05D000091 2.0e-29 132.9 127 53.5
BcaC06g36654 Brassica carinata HOM05D002350 ORTHO05D000091 2.7e-29 132.5 129 45.7
C07p01790 Brassica napus HOM05D002350 ORTHO05D000091 2.7e-29 132.5 129 45.7
BolC7t40582H Brassica oleracea HOM05D002350 ORTHO05D000091 2.7e-29 132.5 129 45.7
DCAR_018379 Daucus carota HOM05D002350 ORTHO05D000091 2.7e-29 132.5 126 53.2
A07p00780 Brassica napus HOM05D002350 ORTHO05D000091 3.5e-29 132.1 129 45.7
A10p17220 Brassica napus HOM05D002350 ORTHO05D000091 3.5e-29 132.1 133 46.6
BraA07t27876Z Brassica rapa HOM05D002350 ORTHO05D000091 3.5e-29 132.1 129 45.7
Thhalv10001897m.g Eutrema salsugineum HOM05D002350 ORTHO05D000091 3.5e-29 132.1 129 45.0
CiPaw.03G226000 Carya illinoinensis HOM05D002350 ORTHO05D000091 4.5e-29 131.7 131 49.6
Sp3g33240 Schrenkiella parvula HOM05D002350 ORTHO05D000091 5.9e-29 131.3 132 47.0
BcaB03g16778 Brassica carinata HOM05D002350 ORTHO05D000091 7.7e-29 131.0 127 47.2
BcaB03g16779 Brassica carinata HOM05D002350 ORTHO05D000091 1.3e-28 130.2 132 46.2
BraA10t43806Z Brassica rapa HOM05D002350 ORTHO05D000091 1.3e-28 130.2 123 48.8
arahy.Tifrunner.gnm1.ann1.HAD3B9 Arachis hypogaea HOM05D002350 ORTHO05D000091 1.7e-28 129.8 121 52.1
A09p59080 Brassica napus HOM05D002350 ORTHO05D000091 2.2e-28 129.4 127 45.7
BraA09t41291Z Brassica rapa HOM05D002350 ORTHO05D000091 2.9e-28 129.0 127 45.7
CARHR110370 Cardamine hirsuta HOM05D002350 ORTHO05D000091 2.9e-28 129.0 129 48.1
C08p42360 Brassica napus HOM05D002350 ORTHO05D000091 3.8e-28 128.6 127 46.5
Aqoxy7G03876 Aquilegia oxysepala HOM05D002350 ORTHO05D000091 5.0e-28 128.3 129 52.7
CSS0049937 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 5.0e-28 128.3 77 74.0
BolC7t40573H Brassica oleracea HOM05D002350 ORTHO05D000091 6.5e-28 127.9 134 46.3
BraA07t27871Z Brassica rapa HOM05D002350 ORTHO05D000091 6.5e-28 127.9 134 47.0
BcaB08g34892 Brassica carinata HOM05D002350 ORTHO05D000091 1.1e-27 127.1 127 45.7
CSS0029567 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 1.1e-27 127.1 99 60.6
CSS0045169 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 1.1e-27 127.1 99 60.6
Prupe.7G221200 Prunus persica HOM05D002350 ORTHO05D000091 1.1e-27 127.1 131 49.6
SalBow5G3880 Salvia bowleyana HOM05D002350 ORTHO05D000091 1.1e-27 127.1 128 47.7
VMungo0464G0493 Vigna mungo HOM05D002350 ORTHO05D000091 1.1e-27 127.1 137 47.4
Gorai.001G008800 Gossypium raimondii HOM05D002350 ORTHO05D000091 1.5e-27 126.7 130 49.2
Oeu064190.1 Olea europaea HOM05D002350 ORTHO05D000091 1.5e-27 126.7 126 52.4
Phvul.004G176400 Phaseolus vulgaris HOM05D002350 ORTHO05D000091 1.9e-27 126.3 137 47.4
Aa31LG8G16870 Aethionema arabicum HOM05D002350 ORTHO05D000091 2.5e-27 125.9 129 47.3
AL3G48290 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 2.5e-27 125.9 126 46.0
BcaC06g36662 Brassica carinata HOM05D002350 ORTHO05D000091 2.5e-27 125.9 129 45.7
BcaC07g41231 Brassica carinata HOM05D002350 ORTHO05D000091 2.5e-27 125.9 126 46.0
MELO3C015406.2 Cucumis melo HOM05D002350 ORTHO05D000091 2.5e-27 125.9 127 51.2
Carub.0003s3418 Capsella rubella HOM05D002350 ORTHO05D000091 4.2e-27 125.2 132 47.0
QL02p042039 Quercus lobata HOM05D002350 ORTHO05D000091 4.2e-27 125.2 129 49.6
ATR0705G139 Amborella trichopoda HOM05D002350 ORTHO05D000091 5.5e-27 124.8 133 48.9
AL3G48270 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 7.2e-27 124.4 133 43.6
CsaV3_1G039730 Cucumis sativus L. HOM05D002350 ORTHO05D000091 7.2e-27 124.4 127 50.4
Gohir.D07G008700 Gossypium hirsutum HOM05D002350 ORTHO05D000091 7.2e-27 124.4 130 48.5
Thhalv10001896m.g Eutrema salsugineum HOM05D002350 ORTHO05D000091 9.4e-27 124.0 129 45.0
arahy.Tifrunner.gnm1.ann1.9LQV7C Arachis hypogaea HOM05D002350 ORTHO05D000091 1.2e-26 123.6 121 50.4
MD15G1195400 Malus domestica HOM05D002350 ORTHO05D000091 1.6e-26 123.2 131 48.9
AT2G19920 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 2.7e-26 122.5 129 44.2
AL3G48310 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 3.6e-26 122.1 129 43.4
AT2G19910 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 3.6e-26 122.1 129 43.4
Sed0013258 Sechium edule HOM05D002350 ORTHO05D000091 3.6e-26 122.1 123 49.6
AT2G19930 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 4.7e-26 121.7 129 43.4
CANSAT56G1437 Cannabis sativa HOM05D002350 ORTHO05D000091 6.1e-26 121.3 135 45.9
PGR102G2642 Punica granatum HOM05D002350 ORTHO05D000091 8.0e-26 120.9 125 47.2
Gohir.A07G008300 Gossypium hirsutum HOM05D002350 ORTHO05D000091 1.8e-25 119.8 130 47.7
Potri.007G081300 Populus trichocarpa HOM05D002350 ORTHO05D000091 2.3e-25 119.4 131 45.0
Glyma.01G008700 Glycine max HOM05D002350 ORTHO05D000091 4.0e-25 118.6 128 46.1
Manes.16G110000 Manihot esculenta HOM05D002350 ORTHO05D000091 5.2e-25 118.2 131 46.6
PSO210G2001 Papaver somniferum HOM05D002350 ORTHO05D000091 5.2e-25 118.2 121 50.4
PSO210G7085 Papaver somniferum HOM05D002350 ORTHO05D000091 5.2e-25 118.2 121 50.4
FAN19G1217 Fragaria x ananassa HOM05D002350 ORTHO05D000091 6.8e-25 117.9 130 48.5
Lalb_Chr14g0371831 Lupinus albus HOM05D002350 ORTHO05D000091 6.8e-25 117.9 129 48.1
C07p01730 Brassica napus HOM05D002350 ORTHO05D000091 1.5e-24 116.7 135 40.7
FvH4_1g05980 Fragaria vesca HOM05D002350 ORTHO05D000091 2.0e-24 116.3 130 47.7
Sc08g0007950 Simmondsia chinensis HOM05D002350 ORTHO05D000091 2.6e-24 115.9 131 46.6
RcHm_v2.0_Chr2g0091711 Rosa chinensis HOM05D002350 ORTHO05D000091 5.7e-24 114.8 129 47.3
Potri.006G164400 Populus trichocarpa HOM05D002350 ORTHO05D000091 1.3e-23 113.6 131 44.3
Lsat_1_v5_gn_8_96860 Lactuca sativa HOM05D002350 ORTHO05D000091 2.2e-23 112.8 129 46.5
Lj2g0003052 Lotus japonicus HOM05D002350 ORTHO05D000091 2.8e-23 112.5 132 42.4
CANSAT56G4254 Cannabis sativa HOM05D002350 ORTHO05D000091 3.7e-23 112.1 138 40.6
Carub.0003s3417 Capsella rubella HOM05D002350 ORTHO05D000091 3.7e-23 112.1 124 43.5
Eucgr.C03764 Eucalyptus grandis HOM05D002350 ORTHO05D000091 3.7e-23 112.1 115 50.4
EL10Ac8g18397 Beta vulgaris HOM05D002350 ORTHO05D000091 6.3e-23 111.3 132 42.4
CSS0030372 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 6.3e-23 111.3 93 57.0
MBI04_g30106_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 6.3e-23 111.3 151 42.4
Psat1g046880 Pisum sativum HOM05D002350 ORTHO05D000091 6.3e-23 111.3 125 45.6
Sabra06G0125300 Salix brachista HOM05D002350 ORTHO05D000091 6.3e-23 111.3 133 42.1
SEGI_17992 Sequoiadendron giganteum HOM05D002350 ORTHO05D000091 6.3e-23 111.3 115 50.4
CSS0049796 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 1.1e-22 110.5 118 44.9
SEGI_05646 Sequoiadendron giganteum HOM05D002350 ORTHO05D000091 1.1e-22 110.5 130 46.2
FAN26G1444 Fragaria x ananassa HOM05D002350 ORTHO05D000091 1.4e-22 110.2 129 45.7
FAN26G3334 Fragaria x ananassa HOM05D002350 ORTHO05D000091 1.4e-22 110.2 129 45.7
AUR62021426 Chenopodium quinoa HOM05D002350 ORTHO05D000091 2.4e-22 109.4 129 45.0
MD02G1064400 Malus domestica HOM05D002350 ORTHO05D000091 5.4e-22 108.2 128 45.3
THA.LOC104808318 Tarenaya hassleriana HOM05D002350 ORTHO05D000091 7.0e-22 107.8 164 36.0
EL10Ac8g18396 Beta vulgaris HOM05D002350 ORTHO05D000091 2.0e-21 106.3 133 44.4
RcHm_v2.0_Chr2g0091721 Rosa chinensis HOM05D002350 ORTHO05D000091 2.0e-21 106.3 135 43.7
TPR.G21372 Trifolium pratense HOM05D002350 ORTHO05D000091 3.5e-21 105.5 135 42.2
Ah.14g083290 Amaranthus hybridus HOM05D002350 ORTHO05D000091 4.5e-21 105.1 128 43.8
Cpa.g.sc40.69 Carica papaya HOM05D002350 ORTHO05D000091 4.5e-21 105.1 135 44.4
ClCG03G016200 Citrullus lanatus HOM05D002350 ORTHO05D000091 4.5e-21 105.1 127 45.7
Aqoxy6G02290 Aquilegia oxysepala HOM05D002350 ORTHO05D000091 1.0e-20 104.0 82 63.4
Medtr6g088660 Medicago truncatula HOM05D002350 ORTHO05D000091 1.7e-20 103.2 118 45.8
RcHm_v2.0_Chr5g0014401 Rosa chinensis HOM05D002350 ORTHO05D000091 1.7e-20 103.2 158 41.1
Hund26256 Selenicereus undatus HOM05D002350 ORTHO05D000091 1.1e-19 100.5 131 39.7
FvH4_1g05990 Fragaria vesca HOM05D002350 ORTHO05D000091 4.2e-19 98.6 131 38.9
FAN19G2534 Fragaria x ananassa HOM05D002350 ORTHO05D000091 4.2e-19 98.6 131 38.9
FAN23G2545 Fragaria x ananassa HOM05D002350 ORTHO05D000091 4.2e-19 98.6 131 38.2
Hund09132 Selenicereus undatus HOM05D002350 ORTHO05D000091 2.8e-18 95.9 98 49.0
Sabra06G0136400 Salix brachista HOM05D002350 ORTHO05D000091 1.4e-17 93.6 129 38.0
A07p00750 Brassica napus HOM05D002350 ORTHO05D000091 5.2e-17 91.7 95 45.3
AUR62010903 Chenopodium quinoa HOM05D002350 ORTHO05D000091 2.6e-16 89.4 132 39.4
AUR62042309 Chenopodium quinoa HOM05D002350 ORTHO05D000091 1.7e-15 86.7 83 54.2
Ca_25564_v3 Cicer arietinum L. HOM05D002350 ORTHO05D000091 2.2e-15 86.3 104 43.3
BcaB03g16780 Brassica carinata HOM05D002350 ORTHO05D000091 6.3e-15 84.7 79 50.6
Lj4P404T2 Lonicera japonica HOM05D002350 ORTHO05D000091 1.0e-12 77.4 78 50.0
AagrBONN_evm.TU.Sc2ySwM_344.1644 Anthoceros agrestis HOM05D002042 ORTHO05D003928 8.6e-12 74.3 126 34.9
AagrBONN_evm.TU.Sc2ySwM_368.2512 Anthoceros agrestis HOM05D002350 ORTHO05D000091 8.6e-12 74.3 83 43.4
QL04p081705 Quercus lobata HOM05D002350 ORTHO05D000091 1.5e-11 73.6 82 51.2
Pp3c5_20740 Physcomitrium patens HOM05D002350 ORTHO05D000091 2.1e-10 69.7 130 30.0
Pp3c6_8520 Physcomitrium patens HOM05D002350 ORTHO05D000091 2.8e-10 69.3 130 31.5
AUR62010902 Chenopodium quinoa HOM05D002350 ORTHO05D000091 4.7e-10 68.6 61 57.4
AUR62021424 Chenopodium quinoa HOM05D002350 ORTHO05D000091 1.0e-09 67.4 92 38.0
Mapoly0048s0033 Marchantia polymorpha HOM05D002350 ORTHO05D000091 1.4e-09 67.0 130 33.1
Pp3c6_8521 Physcomitrium patens HOM05D002350 ORTHO05D000091 1.4e-09 67.0 112 33.9
CDE05G2422 Ceratophyllum demersum HOM05D002350 ORTHO05D000091 2.3e-09 66.2 54 55.6
RcHm_v2.0_Chr2g0091681 Rosa chinensis HOM05D002350 ORTHO05D000091 6.8e-09 64.7 49 55.1
AagrBONN_evm.TU.Sc2ySwM_117.901 Anthoceros agrestis HOM05D000349 ORTHO05D000620 2.6e-08 62.8 129 32.6
COL.COLO4_34762 Corchorus olitorius HOM05D002350 ORTHO05D000091 1.3e-07 60.5 50 50.0
AagrBONN_evm.TU.Sc2ySwM_117.903 Anthoceros agrestis HOM05D002350 ORTHO05D000091 2.9e-07 59.3 128 30.5
A01p33760 Brassica napus HOM05D002350 ORTHO05D000091 3.2e-06 55.8 52 46.2
BolC8t51797H Brassica oleracea HOM05D002350 ORTHO05D000091 5.4e-06 55.1 49 49.0
MBI04_g40931_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 7.0e-06 54.7 42 57.1
MBI04_g17296_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 9.2e-06 54.3 42 57.1
MBI04_g40929_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 9.2e-06 54.3 41 58.5


User provided reference genes

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