Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000164g0060 Nicotiana tabacum HOM05D000024 ORTHO05D283039 4.2e-69 264.6 138 100.0
Nitab4.5_0005500g0060 Nicotiana tabacum HOM05D000024 ORTHO05D284227 1.6e-39 166.4 135 70.4
Nitab4.5_0003397g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.8e-27 126.3 148 49.3
Nitab4.5_0000023g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-26 123.6 137 54.7
Nitab4.5_0000096g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.5e-26 120.9 80 80.0
Nitab4.5_0000500g0250 Nicotiana tabacum HOM05D000024 ORTHO05D285919 3.5e-23 112.1 73 80.8
Nitab4.5_0000404g0050 Nicotiana tabacum HOM05D000024 ORTHO05D283760 1.7e-22 109.8 75 74.7
Nitab4.5_0000106g0450 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.6e-22 107.5 73 75.3
Nitab4.5_0008160g0030 Nicotiana tabacum HOM05D000024 ORTHO05D282591 4.7e-20 101.7 90 61.1
Nitab4.5_0001375g0030 Nicotiana tabacum HOM05D000024 ORTHO05D285087 8.0e-20 100.9 71 70.4
Nitab4.5_0004658g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.5e-18 94.4 73 63.0
Nitab4.5_0000082g0230 Nicotiana tabacum HOM05D011002 ORTHO05D000006 9.2e-16 87.4 156 38.5
Nitab4.5_0006324g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.0e-14 82.4 110 48.2
Nitab4.5_0001107g0070 Nicotiana tabacum HOM05D011002 ORTHO05D000006 1.4e-11 73.6 114 43.0
Nitab4.5_0013732g0010 Nicotiana tabacum HOM05D000024 ORTHO05D283900 1.4e-11 73.6 137 38.0
Nitab4.5_0000573g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-11 73.2 40 87.5
Nitab4.5_0000370g0070 Nicotiana tabacum HOM05D012219 ORTHO05D000006 5.2e-11 71.6 135 38.5
Nitab4.5_0000379g0060 Nicotiana tabacum HOM05D011002 ORTHO05D283817 6.8e-11 71.2 149 33.6
Nitab4.5_0001123g0050 Nicotiana tabacum HOM05D011002 ORTHO05D000006 4.4e-10 68.6 118 39.8
Nitab4.5_0000640g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000006 7.5e-10 67.8 64 57.8
Nitab4.5_0000171g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-09 67.0 104 45.2
Nitab4.5_0001307g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-09 65.9 69 53.6
Nitab4.5_0000575g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-08 63.9 41 78.0
Nitab4.5_0003810g0070 Nicotiana tabacum HOM05D011002 ORTHO05D022887 7.1e-08 61.2 41 73.2
Nitab4.5_0000952g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-07 58.9 34 82.4
Nitab4.5_0000457g0450 Nicotiana tabacum HOM05D008844 ORTHO05D000006 4.6e-07 58.5 41 65.9
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-06 56.2 64 50.0
Nitab4.5_0000457g0440 Nicotiana tabacum HOM05D011002 ORTHO05D000007 8.6e-06 54.3 68 48.5
Nitab4.5_0007450g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 8.6e-06 54.3 40 65.0


User provided reference genes

Program Settings