Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000163g0300 Nicotiana tabacum HOM05D007725 ORTHO05D009774 8.1e-165 584.3 469 100.0
Nitab4.5_0002517g0030 Nicotiana tabacum HOM05D007725 ORTHO05D009774 8.2e-157 557.8 469 86.6
Peaxi162Scf00955g00014 Petunia axillaris HOM05D007725 ORTHO05D009774 3.0e-135 486.1 467 79.4
Sopen12g007550 Solanum pennellii HOM05D007725 ORTHO05D009774 1.7e-133 480.3 468 78.6
PGSC0003DMG402029798 Solanum tuberosum HOM05D007725 ORTHO05D009774 2.8e-133 479.6 468 78.6
Solyc12g015650.3 Solanum lycopersicum HOM05D007725 ORTHO05D009774 4.1e-132 475.7 468 78.2
Lj1P886T16 Lonicera japonica HOM05D007725 ORTHO05D009774 5.4e-92 342.4 460 72.6
CSS0027076 Camellia sinensis var. sinensis HOM05D007725 ORTHO05D009774 6.2e-88 328.9 464 62.5
Cc05_g14730 Coffea canephora HOM05D007725 ORTHO05D009774 1.3e-82 311.2 461 67.9
MSTRG.15782 Avicennia marina HOM05D007725 ORTHO05D009774 1.5e-81 307.8 469 65.7
COL.COLO4_09791 Corchorus olitorius HOM05D007725 ORTHO05D009774 4.9e-77 292.7 456 64.9
VMungo0540G1375 Vigna mungo HOM05D007725 ORTHO05D009774 1.3e-74 284.6 458 62.4
Glyma.08G326100 Glycine max HOM05D007725 ORTHO05D009774 6.6e-74 282.3 457 62.1
Dinv10315 Davidia involucrata HOM05D007725 ORTHO05D009774 4.0e-71 273.1 445 67.4
TAR624G0507 Trochodendron aralioides HOM05D007725 ORTHO05D009774 3.2e-68 263.5 469 62.7
Duzib170G0716 Durio zibethinus HOM05D007725 ORTHO05D009774 5.4e-68 262.7 448 57.1
Nn1g03245 Nelumbo nucifera HOM05D007725 ORTHO05D009774 9.3e-68 261.9 471 57.1
DCAR_022605 Daucus carota HOM05D007725 ORTHO05D009774 1.2e-67 261.5 447 54.8
ClCG09G021110 Citrullus lanatus HOM05D007725 ORTHO05D009774 2.1e-67 260.8 461 61.4
Hma1.2p1_2796F.1_g328670 Hydrangea macrophylla HOM05D007725 ORTHO05D009774 5.1e-66 256.1 464 62.7
Migut.M01753 Erythranthe guttata HOM05D007725 ORTHO05D009774 6.6e-66 255.8 448 65.0
GSVIVG01037784001 Vitis vinifera HOM05D007725 ORTHO05D009774 1.5e-62 244.6 476 57.6
Medtr3g056580 Medicago truncatula HOM05D007725 ORTHO05D009774 9.9e-62 241.9 459 44.9
PSO478G1598 Papaver somniferum HOM05D007725 ORTHO05D009774 9.9e-62 241.9 456 62.3
GSVIVG01037783001 Vitis vinifera HOM05D007725 ORTHO05D009774 2.2e-61 240.7 453 55.6
SalBow8G2031 Salvia bowleyana HOM05D007725 ORTHO05D009774 8.4e-61 238.8 430 65.8
HanXRQChr11g0333971 Helianthus annuus HOM05D007725 ORTHO05D009774 1.1e-60 238.4 458 50.0
Gohir.A11G277300 Gossypium hirsutum HOM05D007725 ORTHO05D009774 5.4e-60 236.1 449 50.3
Ciclev10008214m.g Citrus clementina HOM05D007725 ORTHO05D009774 7.1e-60 235.7 457 57.1
Cfa020227 Carpinus fangiana HOM05D007725 ORTHO05D009774 1.2e-59 235.0 474 57.8
Gorai.007G311000 Gossypium raimondii HOM05D007725 ORTHO05D009774 2.1e-59 234.2 449 46.8
MELO3C024908.2 Cucumis melo HOM05D007725 ORTHO05D009774 1.0e-58 231.9 441 59.4
Cpa.g.sc12.189 Carica papaya HOM05D007725 ORTHO05D009774 8.7e-58 228.8 468 56.0
Nn1g03425 Nelumbo nucifera HOM05D007725 ORTHO05D009774 1.5e-57 228.0 453 61.8
Nn1g07446 Nelumbo nucifera HOM05D007725 ORTHO05D009774 3.3e-57 226.9 459 51.0
CsaV3_7G018510 Cucumis sativus L. HOM05D007725 ORTHO05D009774 5.6e-57 226.1 464 57.3
Sed0002917 Sechium edule HOM05D007725 ORTHO05D009774 9.6e-57 225.3 468 58.1
Haze_09790 Corylus avellana HOM05D007725 ORTHO05D009774 1.6e-56 224.6 470 59.4
Ca_26464_v3 Cicer arietinum L. HOM05D007725 ORTHO05D009774 2.8e-56 223.8 449 51.4
Manes.03G138100 Manihot esculenta HOM05D007725 ORTHO05D009774 4.0e-55 219.9 454 59.5
TPR.G1953 Trifolium pratense HOM05D007725 ORTHO05D009774 5.3e-55 219.5 457 34.4
CARHR095760 Cardamine hirsuta HOM05D007725 ORTHO05D009774 2.6e-54 217.2 458 57.9
AL3G33870 Arabidopsis lyrata HOM05D007725 ORTHO05D009774 3.4e-54 216.9 454 57.7
Oeu005490.1 Olea europaea HOM05D007725 ORTHO05D009774 3.4e-54 216.9 332 62.7
Psat5g175640 Pisum sativum HOM05D007725 ORTHO05D009774 4.5e-54 216.5 454 58.4
Carub.0003s2010 Capsella rubella HOM05D007725 ORTHO05D009774 7.6e-54 215.7 463 58.1
arahy.Tifrunner.gnm1.ann1.TWJV4J Arachis hypogaea HOM05D007725 ORTHO05D009774 2.4e-52 210.7 437 58.1
AT3G20170 Arabidopsis thaliana HOM05D007725 ORTHO05D009774 5.4e-52 209.5 457 58.2
SEGI_22467 Sequoiadendron giganteum HOM05D007725 ORTHO05D009774 7.1e-52 209.1 442 59.0
Gohir.D11G287700 Gossypium hirsutum HOM05D007725 ORTHO05D009774 1.6e-51 208.0 449 43.0
ATR1149G149 Amborella trichopoda HOM05D007725 ORTHO05D009774 6.0e-51 206.1 453 59.4
C05p44210 Brassica napus HOM05D007725 ORTHO05D009774 1.0e-50 205.3 459 56.9
Sp3g18200 Schrenkiella parvula HOM05D007725 ORTHO05D009774 1.3e-50 204.9 458 56.6
BcaB04g19094 Brassica carinata HOM05D007725 ORTHO05D009774 1.8e-50 204.5 479 56.4
arahy.Tifrunner.gnm1.ann1.LCTM2T Arachis hypogaea HOM05D007725 ORTHO05D009774 2.3e-50 204.1 437 57.7
Aa31LG8G7000 Aethionema arabicum HOM05D007725 ORTHO05D009774 3.9e-50 203.4 464 56.7
BolC5t33143H Brassica oleracea HOM05D007725 ORTHO05D009774 6.7e-50 202.6 459 56.6
QL08p005480 Quercus lobata HOM05D007725 ORTHO05D009774 8.7e-50 202.2 455 53.8
BolC3t17381H Brassica oleracea HOM05D007725 ORTHO05D009774 1.1e-49 201.8 463 56.4
SGA_v2.0_scaffold168G38532 Striga asiatica HOM05D007725 ORTHO05D009774 1.5e-49 201.4 450 32.9
arahy.Tifrunner.gnm1.ann1.Q8DMES Arachis hypogaea HOM05D007725 ORTHO05D009774 4.3e-49 199.9 439 59.5
C03p50970 Brassica napus HOM05D007725 ORTHO05D009774 4.3e-49 199.9 463 56.2
A05p28800 Brassica napus HOM05D007725 ORTHO05D009774 1.3e-48 198.4 459 56.4
A03p41610 Brassica napus HOM05D007725 ORTHO05D009774 1.6e-48 198.0 462 56.1
BraA03t13314Z Brassica rapa HOM05D007725 ORTHO05D009774 1.6e-48 198.0 462 56.1
Thhalv10020642m.g Eutrema salsugineum HOM05D007725 ORTHO05D009774 2.8e-48 197.2 459 56.9
EL10Ac4g07611 Beta vulgaris HOM05D007725 ORTHO05D009774 8.1e-48 195.7 351 55.8
Phvul.006G053700 Phaseolus vulgaris HOM05D007725 ORTHO05D009774 1.1e-47 195.3 363 65.3
AUR62040655 Chenopodium quinoa HOM05D007725 ORTHO05D009774 2.7e-43 180.6 465 54.8
PGR031G2940 Punica granatum HOM05D007725 ORTHO05D009774 1.0e-42 178.7 479 42.4
AUR62017062 Chenopodium quinoa HOM05D007725 ORTHO05D009774 2.3e-42 177.6 467 54.2
Lj6g0016094 Lotus japonicus HOM05D007725 ORTHO05D009774 1.6e-40 171.4 453 52.8
Lj6g0024671 Lotus japonicus HOM05D007725 ORTHO05D009774 1.9e-36 157.9 460 50.7
Lj2g0017250 Lotus japonicus HOM05D007725 ORTHO05D009774 2.5e-36 157.5 457 38.1
COL.COLO4_09793 Corchorus olitorius HOM05D007725 ORTHO05D009774 3.9e-34 150.2 193 46.1
Lj6g0003901 Lotus japonicus HOM05D007725 ORTHO05D009774 6.7e-34 149.4 346 48.6
Thecc.07G022000 Theobroma cacao HOM05D007725 ORTHO05D009774 2.7e-27 127.5 167 44.9
HPP92_006089 Vanilla planifolia HOM05D007725 ORTHO05D009774 4.6e-27 126.7 455 48.8
BraA05t21757Z Brassica rapa HOM05D007725 ORTHO05D009774 5.7e-25 119.8 204 38.7
BcaC01g03576 Brassica carinata HOM05D007725 ORTHO05D009774 3.1e-15 87.4 140 39.3
TPR.G1910 Trifolium pratense HOM05D007725 ORTHO05D009774 4.1e-15 87.0 76 57.9
BcaC02g11617 Brassica carinata HOM05D007725 ORTHO05D009774 2.2e-08 64.7 48 66.7


User provided reference genes

Program Settings