Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000162g0020 Nicotiana tabacum HOM05D004408 ORTHO05D005486 1.0e-126 456.8 248 100.0
Nitab4.5_0000921g0020 Nicotiana tabacum HOM05D004408 ORTHO05D005486 8.0e-119 430.6 263 91.6
CAN.G167.11 Capsicum annuum HOM05D004408 ORTHO05D005486 7.0e-115 417.5 263 88.2
Peaxi162Scf01827g00009 Petunia axillaris HOM05D004408 ORTHO05D005486 9.1e-115 417.2 263 87.8
Sopen09g011530 Solanum pennellii HOM05D004408 ORTHO05D005486 7.2e-112 407.5 263 86.3
Solyc09g018340.2 Solanum lycopersicum HOM05D004408 ORTHO05D005486 9.4e-112 407.1 263 86.3
GSVIVG01021873001 Vitis vinifera HOM05D004408 ORTHO05D005486 9.4e-104 380.6 263 79.1
Rhsim05G0150300 Rhododendron simsii HOM05D004408 ORTHO05D005486 5.2e-102 374.8 279 75.6
CSS0006895 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 6.8e-102 374.4 270 78.5
CSS0009913 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 6.8e-102 374.4 270 78.5
Ciclev10000022m.g Citrus clementina HOM05D004408 ORTHO05D005486 7.5e-101 370.9 263 76.8
DCAR_001927 Daucus carota HOM05D004408 ORTHO05D005486 9.8e-101 370.5 263 77.6
TAR365G0706 Trochodendron aralioides HOM05D004408 ORTHO05D005486 1.3e-100 370.2 263 76.8
Migut.B01071 Erythranthe guttata HOM05D004408 ORTHO05D005486 1.8e-99 366.3 262 76.3
SalBow8G3789 Salvia bowleyana HOM05D004408 ORTHO05D005486 2.4e-99 365.9 262 77.1
MSTRG.20441 Avicennia marina HOM05D004408 ORTHO05D005486 9.1e-99 364.0 262 76.0
ECA232G0933 Erigeron canadensis HOM05D004408 ORTHO05D005486 1.2e-98 363.6 263 75.3
COL.COLO4_15257 Corchorus olitorius HOM05D004408 ORTHO05D005486 1.6e-98 363.2 263 74.9
Ca_10066_v3 Cicer arietinum L. HOM05D004408 ORTHO05D005486 3.5e-98 362.1 263 75.3
TWI56G0724 Tripterygium wilfordii HOM05D004408 ORTHO05D005486 5.9e-98 361.3 263 75.3
HanXRQChr11g0322991 Helianthus annuus HOM05D004408 ORTHO05D005486 1.7e-97 359.8 263 74.5
TPR.G11136 Trifolium pratense HOM05D004408 ORTHO05D005486 1.7e-97 359.8 263 74.9
Medtr1g081710 Medicago truncatula HOM05D004408 ORTHO05D005486 3.8e-97 358.6 263 74.1
Thecc.05G290600 Theobroma cacao HOM05D004408 ORTHO05D005486 6.6e-97 357.8 263 74.9
Sabra13G0034100 Salix brachista HOM05D004408 ORTHO05D005486 8.6e-97 357.5 263 76.0
Potri.013G035100 Populus trichocarpa HOM05D004408 ORTHO05D005486 1.1e-96 357.1 263 76.0
Duzib177G0039 Durio zibethinus HOM05D004408 ORTHO05D005486 2.5e-96 355.9 263 75.3
Nn1g02333 Nelumbo nucifera HOM05D004408 ORTHO05D005486 5.5e-96 354.8 266 74.4
arahy.Tifrunner.gnm1.ann1.4PM453 Arachis hypogaea HOM05D004408 ORTHO05D005486 7.2e-96 354.4 263 75.3
Glyma.10G159500 Glycine max HOM05D004408 ORTHO05D005486 9.5e-96 354.0 263 74.1
Aqoxy2G03396 Aquilegia oxysepala HOM05D004408 ORTHO05D005486 1.6e-95 353.2 263 71.9
PSO761G0213 Papaver somniferum HOM05D004408 ORTHO05D005486 1.6e-95 353.2 263 72.6
Lj5g0005673 Lotus japonicus HOM05D004408 ORTHO05D005486 2.1e-95 352.8 263 74.5
PSO210G7697 Papaver somniferum HOM05D004408 ORTHO05D005486 2.8e-95 352.4 263 72.6
Phvul.007G184950 Phaseolus vulgaris HOM05D004408 ORTHO05D005486 6.1e-95 351.3 263 74.1
MD04G1218000 Malus domestica HOM05D004408 ORTHO05D005486 8.0e-95 350.9 263 74.5
Gorai.007G286000 Gossypium raimondii HOM05D004408 ORTHO05D005486 1.8e-94 349.7 263 74.5
Cc02_g31380 Coffea canephora HOM05D004408 ORTHO05D005486 2.3e-94 349.4 313 65.8
Glyma.20G229100 Glycine max HOM05D004408 ORTHO05D005486 5.2e-94 348.2 263 74.1
Prupe.6G338000 Prunus persica HOM05D004408 ORTHO05D005486 6.8e-94 347.8 263 74.1
Eucgr.B01725 Eucalyptus grandis HOM05D004408 ORTHO05D005486 1.5e-93 346.7 263 73.0
VMungo0720G1928 Vigna mungo HOM05D004408 ORTHO05D005486 2.0e-93 346.3 263 72.6
Lsat_1_v5_gn_4_142681 Lactuca sativa HOM05D004408 ORTHO05D005486 4.4e-93 345.1 260 74.2
Hund06994 Selenicereus undatus HOM05D004408 ORTHO05D005486 7.5e-93 344.4 263 73.8
Lalb_Chr06g0167911 Lupinus albus HOM05D004408 ORTHO05D005486 4.9e-92 341.7 263 72.2
RcHm_v2.0_Chr3g0461321 Rosa chinensis HOM05D004408 ORTHO05D005486 1.1e-91 340.5 263 74.1
CANSAT54G0296 Cannabis sativa HOM05D004408 ORTHO05D005486 1.4e-91 340.1 263 72.6
FvH4_6g10420 Fragaria vesca HOM05D004408 ORTHO05D005486 4.1e-91 338.6 263 74.1
Manes.09G157400 Manihot esculenta HOM05D004408 ORTHO05D005486 4.1e-91 338.6 263 74.5
FAN02G3979 Fragaria x ananassa HOM05D004408 ORTHO05D005486 2.0e-90 336.3 263 73.4
Lalb_Chr21g0310861 Lupinus albus HOM05D004408 ORTHO05D005486 2.0e-90 336.3 263 71.5
FAN05G2697 Fragaria x ananassa HOM05D004408 ORTHO05D005486 4.5e-90 335.1 263 73.4
FAN09G0115 Fragaria x ananassa HOM05D004408 ORTHO05D005486 4.5e-90 335.1 263 73.4
CsaV3_1G039670 Cucumis sativus L. HOM05D004408 ORTHO05D005486 3.8e-89 332.0 263 69.6
ClCG03G016280 Citrullus lanatus HOM05D004408 ORTHO05D005486 5.0e-89 331.6 263 69.6
Ah.04g162440 Amaranthus hybridus HOM05D004408 ORTHO05D005486 5.6e-88 328.2 263 69.6
AUR62005003 Chenopodium quinoa HOM05D004408 ORTHO05D005486 9.5e-88 327.4 265 69.1
MELO3C015391.2 Cucumis melo HOM05D004408 ORTHO05D005486 9.5e-88 327.4 263 68.8
HPP92_012131 Vanilla planifolia HOM05D004408 ORTHO05D005486 1.6e-87 326.6 263 71.9
Sc06g0003710 Simmondsia chinensis HOM05D004408 ORTHO05D005486 1.8e-86 323.2 263 68.8
ATR0697G205 Amborella trichopoda HOM05D004408 ORTHO05D005486 2.4e-83 312.8 263 68.8
THA.LOC104818650 Tarenaya hassleriana HOM05D004408 ORTHO05D005486 1.6e-82 310.1 263 66.5
arahy.Tifrunner.gnm1.ann1.6Q424B Arachis hypogaea HOM05D004408 ORTHO05D005486 2.3e-81 306.2 244 73.0
Cfa006478 Carpinus fangiana HOM05D004408 ORTHO05D005486 3.9e-81 305.4 263 67.3
EL10Ac4g09198 Beta vulgaris HOM05D004408 ORTHO05D005486 3.3e-80 302.4 263 65.8
PGR083G2727 Punica granatum HOM05D004408 ORTHO05D005486 9.5e-80 300.8 263 66.9
A02p38480 Brassica napus HOM05D004408 ORTHO05D005486 2.1e-79 299.7 263 65.4
AL6G40140 Arabidopsis lyrata HOM05D004408 ORTHO05D005486 3.6e-79 298.9 263 65.0
BcaB07g34188 Brassica carinata HOM05D004408 ORTHO05D005486 6.2e-79 298.1 263 64.6
Sp2g20340 Schrenkiella parvula HOM05D004408 ORTHO05D005486 6.2e-79 298.1 263 65.0
C02p57800 Brassica napus HOM05D004408 ORTHO05D005486 8.0e-79 297.7 263 65.0
BcaC03g17767 Brassica carinata HOM05D004408 ORTHO05D005486 1.8e-78 296.6 263 64.6
Thhalv10003510m.g Eutrema salsugineum HOM05D004408 ORTHO05D005486 5.2e-78 295.0 263 65.0
AT5G27970 Arabidopsis thaliana HOM05D004408 ORTHO05D005486 6.8e-78 294.7 263 64.6
Carub.0006s2545 Capsella rubella HOM05D004408 ORTHO05D005486 1.2e-77 293.9 263 64.3
BraA02t08826Z Brassica rapa HOM05D004408 ORTHO05D005486 8.3e-76 287.7 283 60.8
A06p37770 Brassica napus HOM05D004408 ORTHO05D005486 9.2e-75 284.3 267 62.9
BolC2t11853H Brassica oleracea HOM05D004408 ORTHO05D005486 1.2e-74 283.9 295 58.6
CiPaw.07G007800 Carya illinoinensis HOM05D004408 ORTHO05D005486 2.7e-74 282.7 263 62.7
BraA06t26696Z Brassica rapa HOM05D004408 ORTHO05D005486 1.0e-73 280.8 287 58.5
BcaNung04259 Brassica carinata HOM05D004408 ORTHO05D005486 1.3e-73 280.4 274 61.3
C07p40460 Brassica napus HOM05D004408 ORTHO05D005486 1.7e-73 280.0 285 59.3
BolC7t44581H Brassica oleracea HOM05D004408 ORTHO05D005486 1.7e-73 280.0 285 59.3
AagrBONN_evm.TU.Sc2ySwM_228.3627 Anthoceros agrestis HOM05D004408 ORTHO05D005486 1.1e-72 277.3 264 59.5
Psat6g147640 Pisum sativum HOM05D004408 ORTHO05D005486 3.3e-72 275.8 204 74.5
unitig_0.g2223 Utricularia gibba HOM05D004408 ORTHO05D005486 6.2e-71 271.6 243 63.8
SHI08350 Sapria himalayana HOM05D004408 ORTHO05D005486 5.2e-70 268.5 266 57.9
Mapoly0167s0007 Marchantia polymorpha HOM05D004408 ORTHO05D005486 5.8e-69 265.0 264 56.4
Gohir.A11G256300 Gossypium hirsutum HOM05D004408 ORTHO05D005486 9.9e-69 264.2 207 70.5
Gohir.D11G266000 Gossypium hirsutum HOM05D004408 ORTHO05D005486 1.3e-68 263.8 207 71.0
MBI05_g21270_MAGBIO Magnolia biondii HOM05D004408 ORTHO05D005486 2.2e-68 263.1 212 69.8
vmacro19680 Vaccinium macrocarpon HOM05D004408 ORTHO05D005486 5.4e-67 258.5 182 79.1
SMO169G0216 Selaginella moellendorffii HOM05D004408 ORTHO05D005486 2.3e-65 253.1 263 54.8
Aa31LG11G8830 Aethionema arabicum HOM05D004408 ORTHO05D005486 1.5e-64 250.4 247 60.7
QL03p022358 Quercus lobata HOM05D004408 ORTHO05D005486 4.3e-64 248.8 211 65.9
AUR62000963 Chenopodium quinoa HOM05D004408 ORTHO05D005486 9.5e-64 247.7 263 56.3
CDE10G0751 Ceratophyllum demersum HOM05D004408 ORTHO05D005486 2.8e-63 246.1 263 56.3
CBR_g18881 Chara braunii HOM05D004408 ORTHO05D005486 6.2e-63 245.0 263 51.0
Actinidia17457 Actinidia chinensis HOM05D004408 ORTHO05D005486 1.8e-62 243.4 180 73.9
Zm00001eb151860 Zea mays HOM05D004408 ORTHO05D005486 1.7e-60 236.9 201 65.7
CBR_g23067 Chara braunii HOM05D004408 ORTHO05D005486 1.5e-56 223.8 264 51.5
Pp3c17_790 Physcomitrium patens HOM05D004408 ORTHO05D005486 4.0e-54 215.7 266 48.5
Cpa.g.sc117.56 Carica papaya HOM05D004408 ORTHO05D005486 5.1e-49 198.7 324 44.1
Atru.chr2.667 Acer truncatum HOM05D004408 ORTHO05D005486 8.7e-49 198.0 147 74.8
Oeu060841.3 Olea europaea HOM05D004408 ORTHO05D005486 2.4e-46 189.9 137 73.7
Sed0014385 Sechium edule HOM05D004408 ORTHO05D005486 4.6e-42 175.6 137 69.3
SEGI_03716 Sequoiadendron giganteum HOM05D004408 ORTHO05D005486 1.1e-38 164.5 127 70.9
SEGI_41322 Sequoiadendron giganteum HOM05D004408 ORTHO05D005486 1.4e-35 154.1 133 63.9
SMO116G0400 Selaginella moellendorffii HOM05D004408 ORTHO05D005486 1.9e-24 117.1 126 52.4
Os01g0772700 Oryza sativa ssp. japonica HOM05D004408 ORTHO05D005486 3.3e-24 116.3 213 39.9
Dinv05121 Davidia involucrata HOM05D004408 ORTHO05D005486 6.1e-18 95.5 54 87.0
Cre13.g575250 Chlamydomonas reinhardtii HOM05D004408 ORTHO05D005486 1.0e-17 94.7 187 35.8
Atru.chr2.666 Acer truncatum HOM05D004408 ORTHO05D005486 5.7e-16 89.0 64 68.8
Psat6g147760 Pisum sativum HOM05D004408 ORTHO05D005486 6.7e-09 65.5 156 37.8
Gohir.D11G265950 Gossypium hirsutum HOM05D004408 ORTHO05D005486 1.7e-07 60.8 36 88.9
MBI05_g21273_MAGBIO Magnolia biondii HOM05D004408 ORTHO05D005486 3.7e-07 59.7 35 88.6


User provided reference genes

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