Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000161g0220 Nicotiana tabacum HOM05D000253 ORTHO05D000149 6.4e-60 233.8 111 100.0
Nitab4.5_0006622g0030 Nicotiana tabacum HOM05D000253 ORTHO05D000149 1.5e-32 142.9 128 64.1
Nitab4.5_0000161g0240 Nicotiana tabacum HOM05D000253 ORTHO05D000149 5.6e-32 141.0 128 64.8
Peaxi162Scf00423g00081 Petunia axillaris HOM05D000253 ORTHO05D000149 2.0e-29 132.5 136 59.6
PGSC0003DMG400013079 Solanum tuberosum HOM05D000253 ORTHO05D000149 6.7e-25 117.5 113 56.6
Solyc05g053920.1 Solanum lycopersicum HOM05D000253 ORTHO05D000149 1.1e-22 110.2 101 59.4
PGSC0003DMG400013078 Solanum tuberosum HOM05D000253 ORTHO05D000149 1.4e-22 109.8 101 57.4
Solyc05g053910.1 Solanum lycopersicum HOM05D000253 ORTHO05D000149 2.4e-22 109.0 115 53.0
Sopen05g032390 Solanum pennellii HOM05D000253 ORTHO05D000149 3.1e-22 108.6 115 53.0
PGSC0003DMG400013074 Solanum tuberosum HOM05D000253 ORTHO05D000149 4.2e-19 98.2 101 55.4
CAN.G1473.4 Capsicum annuum HOM05D000253 ORTHO05D000149 5.5e-19 97.8 100 58.0
Ciclev10023837m.g Citrus clementina HOM05D000253 ORTHO05D000149 5.5e-19 97.8 82 63.4
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 1.2e-18 96.7 101 54.5
Dinv44061 Davidia involucrata HOM05D000253 ORTHO05D000149 3.5e-18 95.1 100 53.0
CSS0013782 Camellia sinensis var. sinensis HOM05D000253 ORTHO05D000149 7.9e-18 94.0 81 60.5
CiPaw.13G026000 Carya illinoinensis HOM05D000253 ORTHO05D000149 1.0e-17 93.6 82 56.1
Lj9P557T17 Lonicera japonica HOM05D000253 ORTHO05D000149 1.3e-17 93.2 89 57.3
SalBow5G0038 Salvia bowleyana HOM05D000253 ORTHO05D000149 1.8e-17 92.8 81 60.5
SalBow5G4230 Salvia bowleyana HOM05D000253 ORTHO05D000149 1.8e-17 92.8 81 60.5
Potri.014G047700 Populus trichocarpa HOM05D000253 ORTHO05D000149 2.3e-17 92.4 100 54.0
PGSC0003DMG400025997 Solanum tuberosum HOM05D000253 ORTHO05D000149 3.9e-17 91.7 83 62.7
Manes.05G054900 Manihot esculenta HOM05D000253 ORTHO05D000149 8.7e-17 90.5 100 51.0
Nitab4.5_0014912g0010 Nicotiana tabacum HOM05D000253 ORTHO05D000149 8.7e-17 90.5 135 43.7
Haze_02850 Corylus avellana HOM05D000253 ORTHO05D000149 1.5e-16 89.7 93 52.7
Sopen01g036010 Solanum pennellii HOM05D000253 ORTHO05D000149 1.5e-16 89.7 81 64.2
TWI59G0249 Tripterygium wilfordii HOM05D000253 ORTHO05D000149 1.5e-16 89.7 81 61.7
Duzib133G0204 Durio zibethinus HOM05D000253 ORTHO05D000149 1.9e-16 89.4 100 49.0
Actinidia12144 Actinidia chinensis HOM05D000253 ORTHO05D000149 3.3e-16 88.6 100 50.0
MSTRG.20689 Avicennia marina HOM05D000253 ORTHO05D000149 3.3e-16 88.6 85 58.8
CSS0013326 Camellia sinensis var. sinensis HOM05D000253 ORTHO05D000149 3.3e-16 88.6 100 50.0
Cfa011067 Carpinus fangiana HOM05D000253 ORTHO05D000149 3.3e-16 88.6 93 53.8
Eucgr.E01547 Eucalyptus grandis HOM05D000253 ORTHO05D000149 3.3e-16 88.6 89 55.1
Thecc.01G395200 Theobroma cacao HOM05D000253 ORTHO05D000149 4.3e-16 88.2 81 58.0
Cfa011068 Carpinus fangiana HOM05D000253 ORTHO05D000149 7.4e-16 87.4 81 56.8
Ciclev10020217m.g Citrus clementina HOM05D000253 ORTHO05D000149 7.4e-16 87.4 102 50.0
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 9.7e-16 87.0 81 63.0
Duzib133G1289 Durio zibethinus HOM05D000253 ORTHO05D000149 1.6e-15 86.3 81 60.5
Potri.014G047900 Populus trichocarpa HOM05D000253 ORTHO05D000149 1.6e-15 86.3 81 59.3
COL.COLO4_12405 Corchorus olitorius HOM05D000253 ORTHO05D000149 2.8e-15 85.5 100 48.0
Prupe.2G132000 Prunus persica HOM05D000253 ORTHO05D000149 2.8e-15 85.5 83 54.2
QL04p030261 Quercus lobata HOM05D000253 ORTHO05D000149 2.8e-15 85.5 81 58.0
Dinv43614 Davidia involucrata HOM05D000253 ORTHO05D000149 3.7e-15 85.1 100 50.0
Phvul.008G047100 Phaseolus vulgaris HOM05D000253 ORTHO05D000149 4.8e-15 84.7 81 55.6
Dinv43615 Davidia involucrata HOM05D000253 ORTHO05D000149 6.3e-15 84.3 100 49.0
Oeu024164.1 Olea europaea HOM05D000253 ORTHO05D000149 6.3e-15 84.3 81 55.6
TWI14G1213 Tripterygium wilfordii HOM05D000253 ORTHO05D000149 6.3e-15 84.3 81 58.0
Oeu063242.1 Olea europaea HOM05D000253 ORTHO05D000149 8.2e-15 84.0 81 55.6
Oeu063243.1 Olea europaea HOM05D000253 ORTHO05D000149 8.2e-15 84.0 81 55.6
Potri.002G137900 Populus trichocarpa HOM05D000253 ORTHO05D000149 8.2e-15 84.0 81 55.6
Thecc.01G395000 Theobroma cacao HOM05D000253 ORTHO05D000149 8.2e-15 84.0 81 59.3
Migut.B01534 Erythranthe guttata HOM05D000253 ORTHO05D000149 1.1e-14 83.6 86 53.5
TAR636G1768 Trochodendron aralioides HOM05D000253 ORTHO05D000149 1.1e-14 83.6 92 53.3
Sabra14G0034700 Salix brachista HOM05D000253 ORTHO05D000149 1.4e-14 83.2 100 51.0
TAR636G1080 Trochodendron aralioides HOM05D000253 ORTHO05D000149 1.8e-14 82.8 82 57.3
PGR004G2714 Punica granatum HOM05D000253 ORTHO05D000149 3.1e-14 82.0 81 53.1
COL.COLO4_12406 Corchorus olitorius HOM05D000253 ORTHO05D000149 4.1e-14 81.6 81 56.8
Manes.01G274500 Manihot esculenta HOM05D000253 ORTHO05D000149 4.1e-14 81.6 81 56.8
AT2G44810 Arabidopsis thaliana HOM05D000253 ORTHO05D000149 5.3e-14 81.3 81 51.9
Gohir.D12G100100 Gossypium hirsutum HOM05D000253 ORTHO05D000149 5.3e-14 81.3 100 48.0
Gorai.008G109000 Gossypium raimondii HOM05D000253 ORTHO05D000149 5.3e-14 81.3 100 48.0
Lalb_Chr03g0040401 Lupinus albus HOM05D000253 ORTHO05D000149 5.3e-14 81.3 83 50.6
A05p04980 Brassica napus HOM05D000253 ORTHO05D000149 6.9e-14 80.9 81 54.3
BraA05t19471Z Brassica rapa HOM05D000253 ORTHO05D000149 6.9e-14 80.9 81 54.3
Haze_02849 Corylus avellana HOM05D000253 ORTHO05D000149 6.9e-14 80.9 81 55.6
Prupe.2G132100 Prunus persica HOM05D000253 ORTHO05D000149 6.9e-14 80.9 96 50.0
C04p05810 Brassica napus HOM05D000253 ORTHO05D000149 9.0e-14 80.5 81 54.3
Gohir.A12G097200 Gossypium hirsutum HOM05D000253 ORTHO05D000149 9.0e-14 80.5 100 48.0
Lsat_1_v5_gn_4_39640 Lactuca sativa HOM05D000253 ORTHO05D000149 9.0e-14 80.5 81 51.9
SalBow5G4823 Salvia bowleyana HOM05D000253 ORTHO05D000149 9.0e-14 80.5 81 51.9
Cpa.g.sc22.75 Carica papaya HOM05D000253 ORTHO05D000149 1.2e-13 80.1 81 54.3
CiPaw.13G025900 Carya illinoinensis HOM05D000253 ORTHO05D000149 1.5e-13 79.7 85 55.3
QL04p030168 Quercus lobata HOM05D000253 ORTHO05D000149 1.5e-13 79.7 88 53.4
Sp4g26900 Schrenkiella parvula HOM05D000253 ORTHO05D000149 1.5e-13 79.7 81 53.1
VMungo1383G2280 Vigna mungo HOM05D000253 ORTHO05D000149 1.5e-13 79.7 81 53.1
GSVIVG01018283001 Vitis vinifera HOM05D000253 ORTHO05D000149 1.5e-13 79.7 81 53.1
Atru.chr5.124 Acer truncatum HOM05D000253 ORTHO05D000149 2.0e-13 79.3 85 57.6
BolC4t22210H Brassica oleracea HOM05D000253 ORTHO05D000149 2.6e-13 79.0 81 53.1
Eucgr.D01226 Eucalyptus grandis HOM05D000253 ORTHO05D000149 2.6e-13 79.0 81 48.1
vmacro13498 Vaccinium macrocarpon HOM05D000253 ORTHO05D000149 2.6e-13 79.0 84 50.0
Manes.05G055100 Manihot esculenta HOM05D000253 ORTHO05D000149 3.4e-13 78.6 81 54.3
PGR042G0403 Punica granatum HOM05D000253 ORTHO05D000149 3.4e-13 78.6 81 51.9
AL4G43890 Arabidopsis lyrata HOM05D000253 ORTHO05D000149 4.5e-13 78.2 81 50.6
Gorai.004G070200 Gossypium raimondii HOM05D000253 ORTHO05D000149 5.9e-13 77.8 81 56.8
PGR042G2840 Punica granatum HOM05D000253 ORTHO05D000149 5.9e-13 77.8 83 54.2
Carub.0004s2738 Capsella rubella HOM05D000253 ORTHO05D000149 7.6e-13 77.4 81 49.4
HanXRQChr03g0092991 Helianthus annuus HOM05D000253 ORTHO05D000149 7.6e-13 77.4 85 49.4
Thhalv10001768m.g Eutrema salsugineum HOM05D000253 ORTHO05D000149 1.0e-12 77.0 82 52.4
Gohir.D08G067500 Gossypium hirsutum HOM05D000253 ORTHO05D000149 1.0e-12 77.0 81 55.6
Manes.01G274400 Manihot esculenta HOM05D000253 ORTHO05D000149 1.0e-12 77.0 82 53.7
CARHR140020 Cardamine hirsuta HOM05D000253 ORTHO05D000149 1.3e-12 76.6 81 51.9
FAN10G0558 Fragaria x ananassa HOM05D000253 ORTHO05D000149 1.3e-12 76.6 96 44.8
FAN10G2710 Fragaria x ananassa HOM05D000253 ORTHO05D000149 1.3e-12 76.6 96 44.8
Lj1g0006843 Lotus japonicus HOM05D000253 ORTHO05D000149 1.3e-12 76.6 82 56.1
Rhsim07G0036100 Rhododendron simsii HOM05D000253 ORTHO05D000149 1.3e-12 76.6 84 48.8
CSS0029056 Camellia sinensis var. sinensis HOM05D000253 ORTHO05D000149 1.7e-12 76.3 89 51.7
Glyma.09G243000 Glycine max HOM05D000253 ORTHO05D000149 1.7e-12 76.3 81 55.6
Glyma.18G251600 Glycine max HOM05D000253 ORTHO05D000149 1.7e-12 76.3 81 53.1
Gohir.A08G058300 Gossypium hirsutum HOM05D000253 ORTHO05D000149 1.7e-12 76.3 81 54.3
Cc02_g25130 Coffea canephora HOM05D000253 ORTHO05D000149 2.2e-12 75.9 93 49.5
Ca_08065_v3 Cicer arietinum L. HOM05D000253 ORTHO05D000149 2.9e-12 75.5 95 47.4
ECA240G1565 Erigeron canadensis HOM05D000253 ORTHO05D000149 2.9e-12 75.5 82 46.3
FAN03G2671 Fragaria x ananassa HOM05D000253 ORTHO05D000149 2.9e-12 75.5 96 44.8
TWI23G0016 Tripterygium wilfordii HOM05D000253 ORTHO05D000149 2.9e-12 75.5 81 50.6
CANSAT25G2625 Cannabis sativa HOM05D000253 ORTHO05D000149 3.8e-12 75.1 83 53.0
CiPaw.14G020400 Carya illinoinensis HOM05D000253 ORTHO05D000149 3.8e-12 75.1 82 54.9
CiPaw.14G020500 Carya illinoinensis HOM05D000253 ORTHO05D000149 3.8e-12 75.1 82 54.9
ECA234G0079 Erigeron canadensis HOM05D000253 ORTHO05D000149 3.8e-12 75.1 81 50.6
Sopen05g032400 Solanum pennellii HOM05D000046 ORTHO05D000195 3.8e-12 75.1 77 53.2
FAN06G2702 Fragaria x ananassa HOM05D000253 ORTHO05D000149 5.0e-12 74.7 96 43.8
Glyma.18G251700 Glycine max HOM05D000253 ORTHO05D000149 5.0e-12 74.7 83 51.8
Oeu063244.3 Olea europaea HOM05D000253 ORTHO05D000149 5.0e-12 74.7 81 46.9
FvH4_7g10210 Fragaria vesca HOM05D000253 ORTHO05D000149 6.5e-12 74.3 96 43.8
FAN06G0287 Fragaria x ananassa HOM05D000253 ORTHO05D000149 6.5e-12 74.3 96 43.8
Lj7P547T6 Lonicera japonica HOM05D000253 ORTHO05D000149 6.5e-12 74.3 81 49.4
GSVIVG01018281001 Vitis vinifera HOM05D000253 ORTHO05D000149 6.5e-12 74.3 81 53.1
Phvul.008G047000 Phaseolus vulgaris HOM05D000253 ORTHO05D000149 8.5e-12 73.9 81 50.6
Psat3g099360 Pisum sativum HOM05D000253 ORTHO05D000149 8.5e-12 73.9 81 48.1
TAR629G0809 Trochodendron aralioides HOM05D000253 ORTHO05D000149 8.5e-12 73.9 90 48.9
Atru.chr5.125 Acer truncatum HOM05D000253 ORTHO05D000149 1.1e-11 73.6 82 53.7
THA.LOC104803081 Tarenaya hassleriana HOM05D000253 ORTHO05D000149 1.4e-11 73.2 81 54.3
FAN01G2363 Fragaria x ananassa HOM05D000253 ORTHO05D000149 1.9e-11 72.8 96 42.7
Lj1g0016370 Lotus japonicus HOM05D000253 ORTHO05D000149 1.9e-11 72.8 94 46.8
Gohir.D12G100000 Gossypium hirsutum HOM05D000253 ORTHO05D000149 2.5e-11 72.4 83 51.8
Gorai.008G108900 Gossypium raimondii HOM05D000253 ORTHO05D000149 2.5e-11 72.4 83 51.8
Lj1g0017381 Lotus japonicus HOM05D000253 ORTHO05D000149 2.5e-11 72.4 82 53.7
CANSAT25G1451 Cannabis sativa HOM05D000253 ORTHO05D000149 3.2e-11 72.0 100 42.0
Lalb_Chr03g0040391 Lupinus albus HOM05D000253 ORTHO05D000149 3.2e-11 72.0 83 54.2
Rhsim01G0140900 Rhododendron simsii HOM05D000253 ORTHO05D000149 3.2e-11 72.0 85 48.2
RcHm_v2.0_Chr1g0347941 Rosa chinensis HOM05D000253 ORTHO05D000149 3.2e-11 72.0 90 45.6
THA.LOC104817189 Tarenaya hassleriana HOM05D000253 ORTHO05D000149 3.2e-11 72.0 82 48.8
CAN.G1310.2 Capsicum annuum HOM05D000253 ORTHO05D000149 4.2e-11 71.6 73 54.8
ECA236G3443 Erigeron canadensis HOM05D000253 ORTHO05D000149 4.2e-11 71.6 82 50.0
Gohir.A12G097100 Gossypium hirsutum HOM05D000253 ORTHO05D000149 5.5e-11 71.2 83 51.8
Hma1.2p1_0098F.1_g048450 Hydrangea macrophylla HOM05D000253 ORTHO05D000149 5.5e-11 71.2 84 48.8
MELO3C005944.2 Cucumis melo HOM05D000253 ORTHO05D000149 7.2e-11 70.9 89 41.6
Nn6g33822 Nelumbo nucifera HOM05D000253 ORTHO05D000149 7.2e-11 70.9 91 48.4
Medtr7g081620 Medicago truncatula HOM05D000253 ORTHO05D000149 9.4e-11 70.5 84 44.0
THA.LOC104827682 Tarenaya hassleriana HOM05D000253 ORTHO05D000149 9.4e-11 70.5 86 47.7
Aa31LG1G26350 Aethionema arabicum HOM05D000253 ORTHO05D000149 1.2e-10 70.1 81 50.6
HanXRQChr16g0521341 Helianthus annuus HOM05D000253 ORTHO05D000149 1.2e-10 70.1 81 48.1
MD02G1213100 Malus domestica HOM05D000253 ORTHO05D000149 1.2e-10 70.1 98 44.9
Migut.B01533 Erythranthe guttata HOM05D000253 ORTHO05D000149 1.6e-10 69.7 89 43.8
PGSC0003DMG400026637 Solanum tuberosum HOM05D000253 ORTHO05D000149 1.6e-10 69.7 81 48.1
DCAR_025065 Daucus carota HOM05D000253 ORTHO05D000149 2.1e-10 69.3 81 43.2
Nitab4.5_0000899g0010 Nicotiana tabacum HOM05D000253 ORTHO05D000149 2.1e-10 69.3 81 48.1
Glyma.09G243100 Glycine max HOM05D000253 ORTHO05D000149 2.7e-10 68.9 90 43.3
HanXRQChr03g0092971 Helianthus annuus HOM05D000253 ORTHO05D000149 2.7e-10 68.9 85 47.1
Nitab4.5_0001325g0010 Nicotiana tabacum HOM05D000253 ORTHO05D000149 2.7e-10 68.9 81 48.1
Sc26g0001590 Simmondsia chinensis HOM05D000253 ORTHO05D000149 2.7e-10 68.9 81 45.7
Sed0019534 Sechium edule HOM05D000253 ORTHO05D000149 3.6e-10 68.6 83 44.6
HanXRQChr04g0106061 Helianthus annuus HOM05D000253 ORTHO05D000149 4.6e-10 68.2 82 51.2
Nn1g00843 Nelumbo nucifera HOM05D000253 ORTHO05D000149 4.6e-10 68.2 98 45.9
SalBow5G4024 Salvia bowleyana HOM05D000253 ORTHO05D000149 4.6e-10 68.2 89 44.9
unitig_899.g14943 Utricularia gibba HOM05D000253 ORTHO05D000149 6.1e-10 67.8 81 48.1
SGA_v2.0_scaffold153G36901 Striga asiatica HOM05D000253 ORTHO05D000149 7.9e-10 67.4 81 45.7
SGA_v2.0_scaffold340G49323 Striga asiatica HOM05D000253 ORTHO05D000149 7.9e-10 67.4 100 40.0
Glyma.03G110600 Glycine max HOM05D000253 ORTHO05D000149 1.0e-09 67.0 81 48.1
PSO782G4183 Papaver somniferum HOM05D000253 ORTHO05D000149 1.0e-09 67.0 83 47.0
Peaxi162Scf00103g00067 Petunia axillaris HOM05D000253 ORTHO05D000149 1.0e-09 67.0 81 46.9
TPR.G14108 Trifolium pratense HOM05D000253 ORTHO05D000149 1.4e-09 66.6 84 46.4
CsaV3_3G007230 Cucumis sativus L. HOM05D000253 ORTHO05D000149 2.3e-09 65.9 81 43.2
Lsat_1_v5_gn_7_12001 Lactuca sativa HOM05D000253 ORTHO05D000149 2.3e-09 65.9 82 46.3
Dinv44060 Davidia involucrata HOM05D000253 ORTHO05D000149 3.0e-09 65.5 53 62.3
Oeu063246.1 Olea europaea HOM05D000253 ORTHO05D000149 3.0e-09 65.5 81 44.4
Aqoxy3G02711 Aquilegia oxysepala HOM05D000253 ORTHO05D000149 5.1e-09 64.7 81 44.4
Duzib138G1051 Durio zibethinus HOM05D000253 ORTHO05D000149 5.1e-09 64.7 79 49.4
Phvul.008G047200 Phaseolus vulgaris HOM05D000253 ORTHO05D000149 5.1e-09 64.7 92 42.4
unitig_0.g1354 Utricularia gibba HOM05D000253 ORTHO05D000149 8.8e-09 63.9 89 42.7
Solyc10g038170.1 Solanum lycopersicum HOM05D000253 ORTHO05D000149 1.1e-08 63.5 81 45.7
MD07G1109300 Malus domestica HOM05D000253 ORTHO05D000149 1.9e-08 62.8 98 40.8
HanXRQChr06g0168351 Helianthus annuus HOM05D000253 ORTHO05D000149 3.3e-08 62.0 83 48.2
Glyma.18G251500 Glycine max HOM05D000253 ORTHO05D000149 4.3e-08 61.6 92 41.3
VMungo1383G3185 Vigna mungo HOM05D000253 ORTHO05D000149 5.7e-08 61.2 90 37.8
HanXRQChr06g0167901 Helianthus annuus HOM05D000253 ORTHO05D000149 7.4e-08 60.8 82 47.6
Actinidia12644 Actinidia chinensis HOM05D000253 ORTHO05D000149 9.7e-08 60.5 82 46.3
VMungo1383G2814 Vigna mungo HOM05D000253 ORTHO05D000149 1.3e-07 60.1 92 39.1
ATR0057G125 Amborella trichopoda HOM05D000253 ORTHO05D000149 2.8e-07 58.9 80 41.2
Phvul.010G049800 Phaseolus vulgaris HOM05D000253 ORTHO05D000149 4.8e-07 58.2 90 38.9
unitig_0.g1353 Utricularia gibba HOM05D000253 ORTHO05D000149 1.4e-06 56.6 81 45.7
Lj9P556T7 Lonicera japonica HOM05D000253 ORTHO05D000149 2.4e-06 55.8 81 44.4


User provided reference genes

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