Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 1.5e-100 369.8 222 100.0
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 3.0e-85 318.9 222 84.7
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 2.7e-70 269.2 229 63.3
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 7.5e-68 261.2 282 57.4
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 1.5e-52 210.3 125 82.4
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 4.4e-52 208.8 186 60.2
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 5.7e-52 208.4 183 61.2
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 1.1e-50 204.1 183 61.2
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 7.3e-47 191.4 216 50.0
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 1.6e-46 190.3 221 49.3
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 2.2e-43 179.9 223 44.4
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.9e-43 179.5 217 47.5
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 3.7e-43 179.1 217 47.0
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 6.4e-43 178.3 221 46.2
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 8.3e-43 177.9 213 46.9
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 5.4e-42 175.3 220 46.4
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 1.0e-40 171.0 211 44.5
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.3e-40 170.6 215 47.9
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 6.6e-40 168.3 227 44.1
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 8.6e-40 167.9 220 45.0
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 1.1e-39 167.5 215 44.7
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 1.5e-39 167.2 226 45.1
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 1.5e-39 167.2 209 45.0
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 9.5e-39 164.5 224 42.4
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 9.5e-39 164.5 225 43.1
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 9.5e-39 164.5 212 43.9
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 1.2e-38 164.1 219 44.3
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 1.6e-38 163.7 211 45.0
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 3.6e-38 162.5 212 43.9
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 3.6e-38 162.5 206 44.7
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 4.7e-38 162.2 216 43.5
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 6.2e-38 161.8 227 41.9
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 1.1e-37 161.0 239 40.2
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 5.2e-37 158.7 213 43.2
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 8.9e-37 157.9 213 41.8
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 8.9e-37 157.9 284 40.5
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 2.0e-36 156.8 297 36.0
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 2.6e-36 156.4 213 41.8
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 5.8e-36 155.2 213 41.8
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 9.8e-36 154.5 120 65.8
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 9.8e-36 154.5 216 41.2
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 9.8e-36 154.5 184 62.5
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 1.3e-35 154.1 212 43.4
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 1.3e-35 154.1 212 43.4
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 1.3e-35 154.1 203 42.9
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 2.2e-35 153.3 213 41.3
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 2.9e-35 152.9 219 41.1
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 2.9e-35 152.9 215 41.4
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 3.7e-35 152.5 206 39.8
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 3.7e-35 152.5 212 42.0
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 4.9e-35 152.1 222 41.4
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 6.4e-35 151.8 213 42.7
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 6.4e-35 151.8 119 63.0
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 1.1e-34 151.0 212 40.6
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 1.1e-34 151.0 203 44.8
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 1.1e-34 151.0 219 42.0
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 1.4e-34 150.6 213 40.8
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 2.4e-34 149.8 212 41.0
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 4.1e-34 149.1 212 40.6
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 4.1e-34 149.1 212 40.6
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 4.1e-34 149.1 212 41.5
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 4.1e-34 149.1 215 40.9
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 5.4e-34 148.7 220 39.1
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 1.6e-33 147.1 220 39.1
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 1.6e-33 147.1 211 40.8
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 1.6e-33 147.1 128 54.7
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 1.6e-33 147.1 128 60.9
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 2.1e-33 146.7 218 41.7
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 2.1e-33 146.7 213 39.9
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 2.7e-33 146.4 224 37.9
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 3.5e-33 146.0 132 58.3
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 4.6e-33 145.6 221 40.7
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 4.6e-33 145.6 216 38.4
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 7.8e-33 144.8 181 44.2
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 1.0e-32 144.4 120 62.5
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.3e-32 144.1 215 40.0
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 3.9e-32 142.5 244 37.3
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 8.6e-32 141.4 218 37.2
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 8.6e-32 141.4 210 40.0
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 1.1e-31 141.0 201 40.3
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.1e-31 141.0 191 41.9
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 2.5e-31 139.8 229 38.4
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 3.3e-31 139.4 204 41.2
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 2.1e-30 136.7 187 42.2
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 4.7e-30 135.6 213 38.0
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 6.2e-30 135.2 250 34.0
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 1.4e-29 134.0 175 42.3
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 2.3e-29 133.3 237 36.7
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 8.9e-29 131.3 216 37.5
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 2.6e-28 129.8 214 36.4
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 3.4e-28 129.4 212 36.8
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 4.4e-28 129.0 138 55.1
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 5.8e-28 128.6 141 53.9
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 4.9e-27 125.6 201 37.3
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 6.4e-27 125.2 227 34.4
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 8.4e-27 124.8 215 36.3
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 1.1e-26 124.4 107 58.9
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 1.1e-26 124.4 211 37.0
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 1.9e-26 123.6 198 37.9
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 2.4e-26 123.2 207 37.2
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 3.2e-26 122.9 120 53.3
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 7.1e-26 121.7 204 37.3
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 1.2e-25 120.9 120 55.0
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 1.2e-25 120.9 118 52.5
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 6.0e-25 118.6 236 35.2
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 5.2e-21 105.5 188 34.6
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 6.9e-21 105.1 188 34.6
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 4.4e-20 102.4 215 33.0
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 2.2e-19 100.1 207 30.0
Actinidia27187 Actinidia chinensis HOM05D006222 ORTHO05D007677 8.4e-19 98.2 130 50.0
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 4.2e-18 95.9 94 52.1
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 3.5e-17 92.8 158 35.4
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 5.6e-15 85.5 215 29.3
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 9.6e-15 84.7 127 37.0
AagrBONN_evm.TU.Sc2ySwM_362.227 Anthoceros agrestis HOM05D006222 ORTHO05D007677 9.0e-13 78.2 164 36.0
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 6.4e-11 72.0 193 30.1
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 3.5e-09 66.2 132 32.6
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 1.8e-08 63.9 86 44.2
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 3.0e-08 63.2 86 44.2
PGSC0003DMG400015763 Solanum tuberosum HOM05D006222 ORTHO05D007677 5.1e-08 62.4 43 69.8
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 6.7e-08 62.0 146 31.5
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 2.5e-07 60.1 50 46.0
A03p23980 Brassica napus HOM05D006222 ORTHO05D007677 4.8e-06 55.8 55 45.5


User provided reference genes

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