Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000157g0270 Nicotiana tabacum HOM05D001400 ORTHO05D286563 6.8e-75 283.9 141 100.0
Nitab4.5_0000157g0380 Nicotiana tabacum HOM05D001400 ORTHO05D001795 2.0e-42 176.0 115 81.7
Peaxi162Scf00342g00925 Petunia axillaris HOM05D000611 ORTHO05D000809 2.5e-08 62.8 65 55.4
Sopen01g004660 Solanum pennellii HOM05D000611 ORTHO05D000809 9.4e-08 60.8 67 50.7
Peaxi162Scf00342g01014 Petunia axillaris HOM05D000611 ORTHO05D000809 1.0e-06 57.4 60 53.3
Solyc01g009190.3 Solanum lycopersicum HOM05D000611 ORTHO05D000809 1.0e-06 57.4 67 49.3
CAN.G794.13 Capsicum annuum HOM05D001400 ORTHO05D001795 1.4e-06 57.0 62 50.0
Ca_16262_v3 Cicer arietinum L. HOM05D001400 ORTHO05D001795 1.4e-06 57.0 62 50.0
Glyma.13G028400 Glycine max HOM05D001400 ORTHO05D001795 1.4e-06 57.0 62 50.0
Glyma.20G055900 Glycine max HOM05D001400 ORTHO05D001795 1.4e-06 57.0 62 50.0
Lj6g0019346 Lotus japonicus HOM05D001400 ORTHO05D001795 1.4e-06 57.0 62 50.0
Nitab4.5_0000428g0190 Nicotiana tabacum HOM05D001400 ORTHO05D001795 1.4e-06 57.0 62 50.0
Nitab4.5_0009617g0020 Nicotiana tabacum HOM05D001400 ORTHO05D001795 1.4e-06 57.0 62 50.0
Psat5g113080 Pisum sativum HOM05D001400 ORTHO05D001795 1.4e-06 57.0 62 50.0
Rhsim03G0053000 Rhododendron simsii HOM05D001400 ORTHO05D001795 1.4e-06 57.0 62 50.0
Solyc01g009180.4 Solanum lycopersicum HOM05D001400 ORTHO05D001795 1.4e-06 57.0 62 50.0
Sopen01g004650 Solanum pennellii HOM05D001400 ORTHO05D001795 1.4e-06 57.0 62 50.0
QL01p007259 Quercus lobata HOM05D001400 ORTHO05D001795 2.3e-06 56.2 62 48.4
Cfa010242 Carpinus fangiana HOM05D001400 ORTHO05D001795 3.0e-06 55.8 62 48.4
CiPaw.13G127100 Carya illinoinensis HOM05D001400 ORTHO05D001795 3.0e-06 55.8 62 48.4
Haze_23632 Corylus avellana HOM05D001400 ORTHO05D001795 3.0e-06 55.8 62 48.4
Lalb_Chr20g0116101 Lupinus albus HOM05D001400 ORTHO05D001795 3.0e-06 55.8 62 48.4
Medtr3g079640 Medicago truncatula HOM05D001400 ORTHO05D001795 3.0e-06 55.8 62 48.4
Sed0015849 Sechium edule HOM05D001400 ORTHO05D001795 3.0e-06 55.8 64 46.9
Sed0018038 Sechium edule HOM05D001400 ORTHO05D001795 3.0e-06 55.8 64 46.9
Sed0018685 Sechium edule HOM05D001400 ORTHO05D001795 3.0e-06 55.8 64 46.9
TPR.G37915 Trifolium pratense HOM05D001400 ORTHO05D001795 3.0e-06 55.8 62 48.4
Peaxi162Scf00342g00928 Petunia axillaris HOM05D001400 ORTHO05D001795 4.0e-06 55.5 62 48.4
Aqoxy2G00600 Aquilegia oxysepala HOM05D001400 ORTHO05D001795 5.2e-06 55.1 62 48.4
CAN.G128.147 Capsicum annuum HOM05D001400 ORTHO05D001795 5.2e-06 55.1 62 48.4
Hma1.2p1_0106F.1_g051080 Hydrangea macrophylla HOM05D001400 ORTHO05D001795 5.2e-06 55.1 62 48.4
Nitab4.5_0000387g0090 Nicotiana tabacum HOM05D001400 ORTHO05D001795 5.2e-06 55.1 62 48.4
Nitab4.5_0001606g0040 Nicotiana tabacum HOM05D001400 ORTHO05D001795 5.2e-06 55.1 62 48.4
Nitab4.5_0002087g0040 Nicotiana tabacum HOM05D001400 ORTHO05D001795 5.2e-06 55.1 62 48.4
Potri.004G190900 Populus trichocarpa HOM05D001400 ORTHO05D001795 5.2e-06 55.1 62 48.4
Potri.009G152800 Populus trichocarpa HOM05D001400 ORTHO05D001795 5.2e-06 55.1 62 48.4
Solyc10g081510.2 Solanum lycopersicum HOM05D001400 ORTHO05D001795 5.2e-06 55.1 62 48.4
Sopen10g032020 Solanum pennellii HOM05D001400 ORTHO05D001795 5.2e-06 55.1 62 48.4
vmacro07557 Vaccinium macrocarpon HOM05D001400 ORTHO05D001795 5.2e-06 55.1 62 48.4
Actinidia03939 Actinidia chinensis HOM05D001400 ORTHO05D001795 6.7e-06 54.7 62 48.4
Actinidia06202 Actinidia chinensis HOM05D001400 ORTHO05D001795 6.7e-06 54.7 62 48.4
Aqoxy2G00595 Aquilegia oxysepala HOM05D001400 ORTHO05D001795 6.7e-06 54.7 62 48.4
CANSAT78G0630 Cannabis sativa HOM05D001400 ORTHO05D001795 6.7e-06 54.7 62 48.4
ClCG03G014400 Citrullus lanatus HOM05D001400 ORTHO05D001795 6.7e-06 54.7 62 48.4
MELO3C015586.2 Cucumis melo HOM05D001400 ORTHO05D001795 6.7e-06 54.7 62 48.4
MELO3C026604.2 Cucumis melo HOM05D001400 ORTHO05D001795 6.7e-06 54.7 64 45.3
CsaV3_1G041720 Cucumis sativus L. HOM05D001400 ORTHO05D001795 6.7e-06 54.7 62 48.4
CsaV3_3G043020 Cucumis sativus L. HOM05D001400 ORTHO05D001795 6.7e-06 54.7 64 45.3
Dinv05570 Davidia involucrata HOM05D001400 ORTHO05D001795 6.7e-06 54.7 62 48.4
Dinv25110 Davidia involucrata HOM05D001400 ORTHO05D001795 6.7e-06 54.7 62 48.4
Prupe.7G009200 Prunus persica HOM05D001400 ORTHO05D001795 8.8e-06 54.3 62 46.8
PGSC0003DMG400008708 Solanum tuberosum HOM05D001400 ORTHO05D001795 8.8e-06 54.3 45 64.4


User provided reference genes

Program Settings