Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000154g0090 Nicotiana tabacum HOM05D003495 ORTHO05D004159 2.2e-216 755.4 383 100.0
Nitab4.5_0001397g0040 Nicotiana tabacum HOM05D003495 ORTHO05D004159 3.4e-209 731.5 379 98.2
Peaxi162Scf00479g01011 Petunia axillaris HOM05D003495 ORTHO05D004159 3.4e-201 704.9 383 93.5
CAN.G563.4 Capsicum annuum HOM05D003495 ORTHO05D004159 2.8e-195 685.3 383 90.6
Sopen03g010670 Solanum pennellii HOM05D003495 ORTHO05D004159 6.2e-195 684.1 383 90.3
Solyc03g046450.3 Solanum lycopersicum HOM05D003495 ORTHO05D004159 3.7e-192 674.9 382 89.5
Nitab4.5_0002171g0110 Nicotiana tabacum HOM05D003495 ORTHO05D004159 9.9e-185 650.2 383 86.9
Nitab4.5_0002978g0060 Nicotiana tabacum HOM05D003495 ORTHO05D004159 3.0e-181 638.6 383 86.2
Peaxi162Scf00020g02133 Petunia axillaris HOM05D003495 ORTHO05D004159 2.4e-178 629.0 383 84.6
CAN.G497.44 Capsicum annuum HOM05D003495 ORTHO05D004159 8.9e-178 627.1 381 85.0
Sopen02g034150 Solanum pennellii HOM05D003495 ORTHO05D004159 3.8e-176 621.7 381 84.5
Oeu062191.1 Olea europaea HOM05D003495 ORTHO05D004159 1.7e-173 612.8 381 81.4
Cc07_g04650 Coffea canephora HOM05D003495 ORTHO05D004159 2.3e-173 612.5 383 82.8
CSS0018508 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 3.0e-173 612.1 381 81.4
Dinv34893 Davidia involucrata HOM05D003495 ORTHO05D004159 1.3e-171 606.7 380 81.1
Actinidia18095 Actinidia chinensis HOM05D003495 ORTHO05D004159 1.6e-171 606.3 381 81.1
Hma1.2p1_0588F.1_g184640 Hydrangea macrophylla HOM05D003495 ORTHO05D004159 2.4e-170 602.4 381 79.5
DCAR_011000 Daucus carota HOM05D003495 ORTHO05D004159 6.9e-170 600.9 381 79.5
CSS0004216 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 2.6e-169 599.0 380 79.5
Oeu032840.1 Olea europaea HOM05D003495 ORTHO05D004159 3.4e-169 598.6 381 80.8
GSVIVG01036514001 Vitis vinifera HOM05D003495 ORTHO05D004159 4.4e-169 598.2 381 80.6
Lj4C126G12 Lonicera japonica HOM05D003495 ORTHO05D004159 4.9e-168 594.7 383 80.4
MSTRG.3380 Avicennia marina HOM05D003495 ORTHO05D004159 3.2e-167 592.0 381 78.5
RcHm_v2.0_Chr2g0164371 Rosa chinensis HOM05D003495 ORTHO05D004159 5.4e-167 591.3 381 79.8
CiPaw.03G081100 Carya illinoinensis HOM05D003495 ORTHO05D004159 1.6e-166 589.7 381 78.7
vmacro05603 Vaccinium macrocarpon HOM05D003495 ORTHO05D004159 2.1e-166 589.3 383 78.9
CSS0005441 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 1.7e-165 586.3 381 79.0
FAN02G1990 Fragaria x ananassa HOM05D003495 ORTHO05D004159 3.9e-165 585.1 377 79.3
Prupe.3G246500 Prunus persica HOM05D003495 ORTHO05D004159 5.1e-165 584.7 381 78.7
QL02p063585 Quercus lobata HOM05D003495 ORTHO05D004159 6.6e-165 584.3 381 79.0
Thecc.02G251800 Theobroma cacao HOM05D003495 ORTHO05D004159 1.1e-164 583.6 381 78.0
FAN09G4792 Fragaria x ananassa HOM05D003495 ORTHO05D004159 1.5e-164 583.2 377 79.6
Ciclev10010888m.g Citrus clementina HOM05D003495 ORTHO05D004159 2.5e-164 582.4 383 79.9
FvH4_6g46050 Fragaria vesca HOM05D003495 ORTHO05D004159 5.6e-164 581.3 377 79.3
FAN14G1484 Fragaria x ananassa HOM05D003495 ORTHO05D004159 5.6e-164 581.3 377 79.3
FAN14G3604 Fragaria x ananassa HOM05D003495 ORTHO05D004159 5.6e-164 581.3 377 79.3
TAR374G0385 Trochodendron aralioides HOM05D003495 ORTHO05D004159 1.3e-163 580.1 383 77.5
MD09G1077600 Malus domestica HOM05D003495 ORTHO05D004159 1.6e-163 579.7 380 78.2
MD17G1067900 Malus domestica HOM05D003495 ORTHO05D004159 2.8e-163 578.9 381 78.5
FAN05G3267 Fragaria x ananassa HOM05D003495 ORTHO05D004159 8.1e-163 577.4 377 79.0
COL.COLO4_24186 Corchorus olitorius HOM05D003495 ORTHO05D004159 1.4e-162 576.6 381 77.7
Gohir.A03G138900 Gossypium hirsutum HOM05D003495 ORTHO05D004159 1.8e-162 576.2 381 78.5
Gohir.D02G161820 Gossypium hirsutum HOM05D003495 ORTHO05D004159 6.9e-162 574.3 381 78.2
Atru.chr8.588 Acer truncatum HOM05D003495 ORTHO05D004159 9.0e-162 573.9 381 78.2
Migut.K00878 Erythranthe guttata HOM05D003495 ORTHO05D004159 9.0e-162 573.9 384 78.1
ClCG11G005050 Citrullus lanatus HOM05D003495 ORTHO05D004159 1.5e-161 573.2 381 78.7
HanXRQChr15g0464911 Helianthus annuus HOM05D003495 ORTHO05D004159 1.5e-161 573.2 383 76.2
Cpa.g.sc14.256 Carica papaya HOM05D003495 ORTHO05D004159 2.0e-161 572.8 381 78.0
Cfa007716 Carpinus fangiana HOM05D003495 ORTHO05D004159 3.4e-161 572.0 381 77.2
PGR004G1253 Punica granatum HOM05D003495 ORTHO05D004159 4.5e-161 571.6 381 78.7
TWI60G0296 Tripterygium wilfordii HOM05D003495 ORTHO05D004159 5.8e-161 571.2 381 78.5
Duzib248G1077 Durio zibethinus HOM05D003495 ORTHO05D004159 1.7e-160 569.7 381 76.4
Gorai.005G181800 Gossypium raimondii HOM05D003495 ORTHO05D004159 1.7e-160 569.7 381 77.7
MELO3C022060.2 Cucumis melo HOM05D003495 ORTHO05D004159 3.8e-160 568.5 382 78.0
CsaV3_5G038800 Cucumis sativus L. HOM05D003495 ORTHO05D004159 7.1e-159 564.3 382 77.7
Sed0015478 Sechium edule HOM05D003495 ORTHO05D004159 7.1e-159 564.3 382 77.2
Haze_14358 Corylus avellana HOM05D003495 ORTHO05D004159 9.3e-159 563.9 381 76.6
Duzib268G1709 Durio zibethinus HOM05D003495 ORTHO05D004159 3.5e-158 562.0 381 75.9
TAR622G0597 Trochodendron aralioides HOM05D003495 ORTHO05D004159 4.6e-158 561.6 380 74.7
CANSAT64G2734 Cannabis sativa HOM05D003495 ORTHO05D004159 7.9e-158 560.8 382 76.2
Manes.01G104801 Manihot esculenta HOM05D003495 ORTHO05D004159 1.8e-157 559.7 381 76.4
Eucgr.I02084 Eucalyptus grandis HOM05D003495 ORTHO05D004159 2.3e-157 559.3 381 74.0
HanXRQChr15g0489851 Helianthus annuus HOM05D003495 ORTHO05D004159 6.2e-155 551.2 381 75.1
Glyma.11G061700 Glycine max HOM05D003495 ORTHO05D004159 8.1e-155 550.8 381 74.8
Glyma.19G037200 Glycine max HOM05D003495 ORTHO05D004159 1.4e-154 550.1 381 74.8
Phvul.004G045000 Phaseolus vulgaris HOM05D003495 ORTHO05D004159 1.8e-154 549.7 381 74.8
Lj2g0019402 Lotus japonicus HOM05D003495 ORTHO05D004159 6.9e-154 547.7 381 74.8
ECA232G2419 Erigeron canadensis HOM05D003495 ORTHO05D004159 1.5e-153 546.6 370 75.9
Hund25028 Selenicereus undatus HOM05D003495 ORTHO05D004159 3.4e-153 545.4 381 73.0
Sed0005421 Sechium edule HOM05D003495 ORTHO05D004159 7.6e-153 544.3 382 75.9
Aqoxy5G03432 Aquilegia oxysepala HOM05D003495 ORTHO05D004159 1.0e-152 543.9 381 74.0
arahy.Tifrunner.gnm1.ann1.AQF1TQ Arachis hypogaea HOM05D003495 ORTHO05D004159 2.2e-152 542.7 384 75.0
Lalb_Chr02g0158651 Lupinus albus HOM05D003495 ORTHO05D004159 2.2e-152 542.7 381 74.3
Gohir.D01G134500 Gossypium hirsutum HOM05D003495 ORTHO05D004159 6.5e-152 541.2 380 74.2
VMungo0464G1145 Vigna mungo HOM05D003495 ORTHO05D004159 1.1e-151 540.4 382 74.3
Gorai.002G166500 Gossypium raimondii HOM05D003495 ORTHO05D004159 1.9e-151 539.7 380 74.2
C02p07920 Brassica napus HOM05D003495 ORTHO05D004159 2.1e-150 536.2 384 73.7
BolC2t06715H Brassica oleracea HOM05D003495 ORTHO05D004159 2.1e-150 536.2 384 73.7
BcaC03g18444 Brassica carinata HOM05D003495 ORTHO05D004159 2.7e-150 535.8 384 73.4
A02p03170 Brassica napus HOM05D003495 ORTHO05D004159 2.7e-150 535.8 384 73.7
BraA02t05287Z Brassica rapa HOM05D003495 ORTHO05D004159 2.7e-150 535.8 384 73.7
Medtr6g016215 Medicago truncatula HOM05D003495 ORTHO05D004159 2.7e-150 535.8 381 73.8
BcaNung02199 Brassica carinata HOM05D003495 ORTHO05D004159 4.6e-150 535.0 384 73.4
Gohir.A01G142600 Gossypium hirsutum HOM05D003495 ORTHO05D004159 7.9e-150 534.3 380 73.7
CARHR197650 Cardamine hirsuta HOM05D003495 ORTHO05D004159 2.3e-149 532.7 387 73.1
AT5G15680 Arabidopsis thaliana HOM05D003495 ORTHO05D004159 5.1e-149 531.6 387 73.1
Carub.0006s1383 Capsella rubella HOM05D003495 ORTHO05D004159 6.7e-149 531.2 387 72.9
Psat1g064160 Pisum sativum HOM05D003495 ORTHO05D004159 6.7e-149 531.2 381 73.8
AUR62002798 Chenopodium quinoa HOM05D003495 ORTHO05D004159 8.7e-149 530.8 381 71.4
Dinv33880 Davidia involucrata HOM05D003495 ORTHO05D004159 1.1e-148 530.4 334 80.5
Potri.017G106100 Populus trichocarpa HOM05D003495 ORTHO05D004159 1.1e-148 530.4 381 73.2
Sp6g28440 Schrenkiella parvula HOM05D003495 ORTHO05D004159 1.5e-148 530.0 387 72.6
Aa31LG11G13890 Aethionema arabicum HOM05D003495 ORTHO05D004159 2.5e-148 529.3 387 71.8
EL10Ac6g14290 Beta vulgaris HOM05D003495 ORTHO05D004159 5.7e-148 528.1 376 72.1
PSO063G7059 Papaver somniferum HOM05D003495 ORTHO05D004159 9.6e-148 527.3 406 70.9
AUR62014105 Chenopodium quinoa HOM05D003495 ORTHO05D004159 1.3e-147 526.9 381 70.9
AL6G26520 Arabidopsis lyrata HOM05D003495 ORTHO05D004159 1.6e-147 526.6 387 72.6
Ah.02g128180 Amaranthus hybridus HOM05D003495 ORTHO05D004159 2.1e-147 526.2 381 71.7
Thhalv10012410m.g Eutrema salsugineum HOM05D003495 ORTHO05D004159 1.1e-146 523.9 389 71.5
Sc04g0005950 Simmondsia chinensis HOM05D003495 ORTHO05D004159 1.1e-146 523.9 383 72.1
THA.LOC104820987 Tarenaya hassleriana HOM05D003495 ORTHO05D004159 1.1e-146 523.9 388 72.4
THA.LOC104802983 Tarenaya hassleriana HOM05D003495 ORTHO05D004159 2.0e-145 519.6 384 71.9
unitig_748.g7269 Utricularia gibba HOM05D003495 ORTHO05D004159 5.8e-145 518.1 385 71.4
PSO063G5616 Papaver somniferum HOM05D003495 ORTHO05D004159 5.5e-143 511.5 384 70.8
Lsat_1_v5_gn_4_173921 Lactuca sativa HOM05D003495 ORTHO05D004159 1.5e-140 503.4 385 70.6
BraA03t10052Z Brassica rapa HOM05D003495 ORTHO05D004159 1.3e-139 500.4 383 69.2
C03p08360 Brassica napus HOM05D003495 ORTHO05D004159 2.2e-139 499.6 383 69.5
BolC3t13343H Brassica oleracea HOM05D003495 ORTHO05D004159 2.2e-139 499.6 383 69.5
A03p07290 Brassica napus HOM05D003495 ORTHO05D004159 8.2e-139 497.7 383 68.7
BcaB01g05032 Brassica carinata HOM05D003495 ORTHO05D004159 2.4e-138 496.1 383 68.9
HPP92_025565 Vanilla planifolia HOM05D003495 ORTHO05D004159 1.5e-137 493.4 380 67.4
TPR.G15949 Trifolium pratense HOM05D003495 ORTHO05D004159 3.4e-137 492.3 322 78.3
RcHm_v2.0_Chr2g0117951 Rosa chinensis HOM05D003495 ORTHO05D004159 2.7e-134 482.6 306 79.7
SEGI_22880 Sequoiadendron giganteum HOM05D003495 ORTHO05D004159 3.1e-130 469.2 391 65.0
Hund20735 Selenicereus undatus HOM05D003495 ORTHO05D004159 2.0e-129 466.5 382 64.7
Zm00001eb190620 Zea mays HOM05D003495 ORTHO05D004159 7.2e-127 458.0 391 63.4
CDE04G3053 Ceratophyllum demersum HOM05D003495 ORTHO05D004159 7.4e-124 448.0 382 63.9
ECA238G4655 Erigeron canadensis HOM05D003495 ORTHO05D004159 5.9e-121 438.3 383 61.4
Os02g0830900 Oryza sativa ssp. japonica HOM05D003495 ORTHO05D004159 1.7e-120 436.8 378 63.2
HanXRQChr14g0447961 Helianthus annuus HOM05D003495 ORTHO05D004159 8.2e-115 417.9 389 57.8
ATR0618G126 Amborella trichopoda HOM05D003495 ORTHO05D004159 4.1e-114 415.6 386 61.4
SMO351G0561 Selaginella moellendorffii HOM05D003495 ORTHO05D004159 1.1e-111 407.5 387 58.9
AagrBONN_evm.TU.Sc2ySwM_228.311 Anthoceros agrestis HOM05D003495 ORTHO05D004159 5.5e-111 405.2 398 58.0
Mapoly0124s0011 Marchantia polymorpha HOM05D003495 ORTHO05D004159 4.7e-110 402.1 403 57.3
SHI33626 Sapria himalayana HOM05D003495 ORTHO05D004159 2.0e-108 396.7 386 56.7
Lsat_1_v5_gn_2_85980 Lactuca sativa HOM05D003495 ORTHO05D004159 1.6e-102 377.1 388 55.4
Pp3c13_5370 Physcomitrium patens HOM05D003495 ORTHO05D004159 2.6e-100 369.8 417 51.8
Pp3c12_3160 Physcomitrium patens HOM05D003495 ORTHO05D004159 3.7e-99 365.9 418 51.2
Pp3c3_1860 Physcomitrium patens HOM05D003495 ORTHO05D004159 9.2e-98 361.3 416 51.4
CAN.G497.63 Capsicum annuum HOM05D003495 ORTHO05D004159 4.1e-82 309.3 375 55.2
Ca_20757_v3 Cicer arietinum L. HOM05D003495 ORTHO05D004159 2.9e-75 286.6 212 71.7
SEGI_11817 Sequoiadendron giganteum HOM05D003495 ORTHO05D004159 1.5e-71 274.2 317 53.3
CBR_g31516 Chara braunii HOM05D003495 ORTHO05D004159 1.4e-66 257.7 446 38.8
Solyc02g089390.3 Solanum lycopersicum HOM05D003495 ORTHO05D004159 2.0e-60 237.3 151 84.1
CAN.G497.68 Capsicum annuum HOM05D003495 ORTHO05D015025 3.1e-45 186.8 147 68.7
Psat6g133600 Pisum sativum HOM05D003495 ORTHO05D004159 7.9e-41 172.2 140 70.0
CAN.G497.66 Capsicum annuum HOM05D003495 ORTHO05D004159 1.4e-37 161.4 170 58.8
Actinidia36279 Actinidia chinensis HOM05D003495 ORTHO05D004159 2.3e-24 117.5 185 41.1
Ca_20758_v3 Cicer arietinum L. HOM05D003495 ORTHO05D004159 3.1e-13 80.5 56 76.8
SGA_v2.0_scaffold148G36460 Striga asiatica HOM05D003495 ORTHO05D004159 9.1e-13 79.0 81 54.3
BcaB08g36895 Brassica carinata HOM05D003495 ORTHO05D004159 3.7e-06 57.0 37 75.7


User provided reference genes

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