Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000154g0050 Nicotiana tabacum HOM05D000926 ORTHO05D000707 4.9e-39 164.1 87 100.0
Peaxi162Scf00479g00101 Petunia axillaris HOM05D000926 ORTHO05D000707 2.9e-23 111.7 84 72.6
PGSC0003DMG400001476 Solanum tuberosum HOM05D000926 ORTHO05D000707 5.1e-20 100.9 88 63.6
Nitab4.5_0003384g0050 Nicotiana tabacum HOM05D000926 ORTHO05D000707 7.3e-19 97.1 58 86.2
Solyc02g089450.1 Solanum lycopersicum HOM05D000926 ORTHO05D000707 6.2e-18 94.0 81 61.7
Nitab4.5_0009468g0010 Nicotiana tabacum HOM05D000926 ORTHO05D000707 2.2e-15 85.5 91 54.9
Medtr6g016480 Medicago truncatula HOM05D000926 ORTHO05D000707 2.8e-10 68.6 79 45.6
CiPaw.03G080200 Carya illinoinensis HOM05D000926 ORTHO05D000707 3.6e-10 68.2 77 44.2
Cfa007730 Carpinus fangiana HOM05D000926 ORTHO05D000707 4.8e-10 67.8 80 50.0
Ciclev10013138m.g Citrus clementina HOM05D000926 ORTHO05D000707 6.2e-10 67.4 80 50.0
Lj1g0009060 Lotus japonicus HOM05D000926 ORTHO05D000707 8.1e-10 67.0 75 49.3
TAR374G1048 Trochodendron aralioides HOM05D000926 ORTHO05D000707 8.1e-10 67.0 75 52.0
Cfa007729 Carpinus fangiana HOM05D000926 ORTHO05D000707 1.4e-09 66.2 75 48.0
Psat1g064720 Pisum sativum HOM05D000926 ORTHO05D000707 1.8e-09 65.9 79 41.8
Potri.004G108440 Populus trichocarpa HOM05D000926 ORTHO05D000707 1.8e-09 65.9 75 46.7
Lalb_Chr10g0092481 Lupinus albus HOM05D000926 ORTHO05D000707 2.4e-09 65.5 78 44.9
TPR.G15947 Trifolium pratense HOM05D000926 ORTHO05D000707 2.4e-09 65.5 79 46.8
Eucgr.J01435 Eucalyptus grandis HOM05D000926 ORTHO05D000707 3.1e-09 65.1 78 46.2
Phvul.001G043500 Phaseolus vulgaris HOM05D000926 ORTHO05D000707 3.1e-09 65.1 85 48.2
arahy.Tifrunner.gnm1.ann1.DUC516 Arachis hypogaea HOM05D000926 ORTHO05D000707 4.0e-09 64.7 80 47.5
Duzib211G0100 Durio zibethinus HOM05D000926 ORTHO05D000707 4.0e-09 64.7 75 48.0
EL10Ac2g04400 Beta vulgaris HOM05D000926 ORTHO05D000707 5.3e-09 64.3 79 49.4
CiPaw.03G080100 Carya illinoinensis HOM05D000926 ORTHO05D000707 5.3e-09 64.3 81 48.1
Lj1g0010988 Lotus japonicus HOM05D000926 ORTHO05D000707 5.3e-09 64.3 82 45.1
Medtr0542s0020 Medicago truncatula HOM05D000926 ORTHO05D000707 6.9e-09 63.9 78 47.4
Eucgr.J01438 Eucalyptus grandis HOM05D000926 ORTHO05D000707 9.0e-09 63.5 83 44.6
Manes.01G105800 Manihot esculenta HOM05D000926 ORTHO05D000707 9.0e-09 63.5 78 47.4
VMungo0647G0297 Vigna mungo HOM05D000926 ORTHO05D000707 9.0e-09 63.5 83 47.0
AUR62023120 Chenopodium quinoa HOM05D000926 ORTHO05D000707 1.5e-08 62.8 78 47.4
Psat0s1897g0040 Pisum sativum HOM05D000926 ORTHO05D000707 1.5e-08 62.8 75 45.3
Potri.017G107400 Populus trichocarpa HOM05D000926 ORTHO05D000707 1.5e-08 62.8 75 41.3
Sabra17G0090100 Salix brachista HOM05D000926 ORTHO05D000707 1.5e-08 62.8 75 48.0
HanXRQChr09g0263311 Helianthus annuus HOM05D000926 ORTHO05D000707 2.0e-08 62.4 82 41.5
TPR.G3253 Trifolium pratense HOM05D000926 ORTHO05D000707 2.0e-08 62.4 81 40.7
Phvul.004G046300 Phaseolus vulgaris HOM05D000926 ORTHO05D000707 2.6e-08 62.0 79 43.0
Psat3g193960 Pisum sativum HOM05D000926 ORTHO05D000707 2.6e-08 62.0 78 42.3
Sabra04G0074000 Salix brachista HOM05D000926 ORTHO05D000707 2.6e-08 62.0 75 44.0
TAR629G1973 Trochodendron aralioides HOM05D000926 ORTHO05D000707 2.6e-08 62.0 76 50.0
Potri.004G108680 Populus trichocarpa HOM05D000926 ORTHO05D000707 3.4e-08 61.6 75 45.3
Thecc.04G113000 Theobroma cacao HOM05D000926 ORTHO05D000707 3.4e-08 61.6 75 45.3
AUR62009442 Chenopodium quinoa HOM05D000926 ORTHO05D000368 4.4e-08 61.2 77 50.6
ECA232G3566 Erigeron canadensis HOM05D000926 ORTHO05D000707 4.4e-08 61.2 82 42.7
Eucgr.J01436 Eucalyptus grandis HOM05D000926 ORTHO05D000707 4.4e-08 61.2 75 46.7
Eucgr.J01437 Eucalyptus grandis HOM05D000926 ORTHO05D000707 4.4e-08 61.2 75 45.3
Glyma.18G277600 Glycine max HOM05D000926 ORTHO05D000707 4.4e-08 61.2 78 44.9
Gohir.D03G099400 Gossypium hirsutum HOM05D000926 ORTHO05D000707 4.4e-08 61.2 75 44.0
Gorai.003G104400 Gossypium raimondii HOM05D000926 ORTHO05D000707 4.4e-08 61.2 75 44.0
Potri.004G108800 Populus trichocarpa HOM05D000926 ORTHO05D000707 4.4e-08 61.2 76 46.1
Duzib133G0632 Durio zibethinus HOM05D000926 ORTHO05D000707 5.8e-08 60.8 87 39.1
PGR004G2735 Punica granatum HOM05D000926 ORTHO05D000707 5.8e-08 60.8 78 38.5
Thecc.04G112900 Theobroma cacao HOM05D000926 ORTHO05D000707 5.8e-08 60.8 78 46.2
Medtr7g018090 Medicago truncatula HOM05D000926 ORTHO05D000707 7.6e-08 60.5 83 38.6
FAN05G2979 Fragaria x ananassa HOM05D000926 ORTHO05D000707 9.9e-08 60.1 77 45.5
Glyma.08G254800 Glycine max HOM05D000926 ORTHO05D000707 9.9e-08 60.1 80 45.0
Hma1.2p1_0588F.1_g184540 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 9.9e-08 60.1 76 46.1
Hma1.2p1_0588F.1_g184550 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 9.9e-08 60.1 76 47.4
Manes.02G062400 Manihot esculenta HOM05D000926 ORTHO05D000707 9.9e-08 60.1 75 44.0
Ah.16g100770 Amaranthus hybridus HOM05D000926 ORTHO05D000707 1.3e-07 59.7 81 43.2
HanXRQChr09g0263271 Helianthus annuus HOM05D000926 ORTHO05D000707 1.3e-07 59.7 82 42.7
Phvul.008G023400 Phaseolus vulgaris HOM05D000926 ORTHO05D000707 1.3e-07 59.7 79 44.3
Psat1g064600 Pisum sativum HOM05D000926 ORTHO05D000707 1.3e-07 59.7 79 41.8
Thecc.03G112300 Theobroma cacao HOM05D000926 ORTHO05D000707 1.3e-07 59.7 75 45.3
Gohir.A03G072800 Gossypium hirsutum HOM05D000926 ORTHO05D000707 2.2e-07 58.9 75 42.7
Lalb_Chr10g0092471 Lupinus albus HOM05D000926 ORTHO05D000707 2.2e-07 58.9 79 39.2
QL02p063891 Quercus lobata HOM05D000926 ORTHO05D000707 2.2e-07 58.9 79 43.0
Atru.chr9.649 Acer truncatum HOM05D000926 ORTHO05D000707 2.9e-07 58.5 91 38.5
Ciclev10023021m.g Citrus clementina HOM05D000926 ORTHO05D000707 2.9e-07 58.5 79 45.6
Dinv34883 Davidia involucrata HOM05D000926 ORTHO05D000707 2.9e-07 58.5 78 39.7
Glyma.19G038700 Glycine max HOM05D000926 ORTHO05D000707 2.9e-07 58.5 79 43.0
PGR044G0045 Punica granatum HOM05D000926 ORTHO05D000707 2.9e-07 58.5 88 45.5
Solyc02g089480.1 Solanum lycopersicum HOM05D000926 ORTHO05D000707 2.9e-07 58.5 86 45.3
Sopen02g034220 Solanum pennellii HOM05D000926 ORTHO05D000707 2.9e-07 58.5 86 45.3
Cfa007731 Carpinus fangiana HOM05D000926 ORTHO05D000707 3.8e-07 58.2 83 43.4
Duzib138G1671 Durio zibethinus HOM05D000926 ORTHO05D000707 3.8e-07 58.2 79 46.8
TPR.G38905 Trifolium pratense HOM05D000926 ORTHO05D000707 3.8e-07 58.2 79 44.3
Aqoxy3G03796 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 4.9e-07 57.8 78 44.9
Gohir.D07G185000 Gossypium hirsutum HOM05D000926 ORTHO05D000707 4.9e-07 57.8 89 40.4
Gorai.001G205500 Gossypium raimondii HOM05D000926 ORTHO05D000707 4.9e-07 57.8 89 40.4
Oeu032854.1 Olea europaea HOM05D000926 ORTHO05D000707 4.9e-07 57.8 80 41.2
Psat1g064800 Pisum sativum HOM05D000926 ORTHO05D000707 4.9e-07 57.8 79 40.5
PGR042G0931 Punica granatum HOM05D000926 ORTHO05D000707 4.9e-07 57.8 79 49.4
Sabra04G0073900 Salix brachista HOM05D000926 ORTHO05D000707 4.9e-07 57.8 76 48.7
Gohir.D07G082340 Gossypium hirsutum HOM05D000926 ORTHO05D000707 6.4e-07 57.4 84 41.7
Gorai.001G087900 Gossypium raimondii HOM05D000926 ORTHO05D000707 6.4e-07 57.4 84 41.7
Manes.01G105900 Manihot esculenta HOM05D000926 ORTHO05D000707 6.4e-07 57.4 77 46.8
Manes.05G115600 Manihot esculenta HOM05D000926 ORTHO05D000707 6.4e-07 57.4 76 40.8
MSTRG.2959 Avicennia marina HOM05D000926 ORTHO05D000707 8.4e-07 57.0 75 42.7
Hma1.2p1_2231F.1_g317580 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 8.4e-07 57.0 75 45.3
Potri.017G107200 Populus trichocarpa HOM05D000926 ORTHO05D000707 8.4e-07 57.0 75 46.7
Potri.017G107300 Populus trichocarpa HOM05D000926 ORTHO05D000707 8.4e-07 57.0 76 44.7
SEGI_12639 Sequoiadendron giganteum HOM05D000926 ORTHO05D000707 8.4e-07 57.0 86 38.4
PGSC0003DMG400001479 Solanum tuberosum HOM05D000926 ORTHO05D000707 8.4e-07 57.0 86 43.0
PGSC0003DMG400029541 Solanum tuberosum HOM05D000926 ORTHO05D000707 8.4e-07 57.0 86 43.0
A06p39650 Brassica napus HOM05D000926 ORTHO05D000707 1.1e-06 56.6 84 44.0
BraA06t26880Z Brassica rapa HOM05D000926 ORTHO05D000707 1.1e-06 56.6 84 44.0
COL.COLO4_33437 Corchorus olitorius HOM05D000926 ORTHO05D000707 1.1e-06 56.6 76 40.8
ECA232G0239 Erigeron canadensis HOM05D000926 ORTHO05D000707 1.1e-06 56.6 82 41.5
Rhsim08G0078900 Rhododendron simsii HOM05D000926 ORTHO05D000707 1.1e-06 56.6 75 41.3
Sabra04G0073800 Salix brachista HOM05D000926 ORTHO05D000707 1.1e-06 56.6 80 40.0
Sabra17G0090200 Salix brachista HOM05D000926 ORTHO05D000707 1.1e-06 56.6 77 44.2
GSVIVG01036505001 Vitis vinifera HOM05D000926 ORTHO05D000707 1.1e-06 56.6 75 46.7
CARHR233210 Cardamine hirsuta HOM05D000926 ORTHO05D000707 1.4e-06 56.2 76 43.4
Duzib084G1204 Durio zibethinus HOM05D000926 ORTHO05D000707 1.4e-06 56.2 75 41.3
Medtr4g110130 Medicago truncatula HOM05D021696 ORTHO05D022751 1.4e-06 56.2 78 43.6
Potri.017G107100 Populus trichocarpa HOM05D000926 ORTHO05D000707 1.4e-06 56.2 91 40.7
QL02p063866 Quercus lobata HOM05D000926 ORTHO05D000707 1.4e-06 56.2 75 45.3
RcHm_v2.0_Chr2g0164101 Rosa chinensis HOM05D000926 ORTHO05D000707 1.4e-06 56.2 76 40.8
EL10Ac2g02434 Beta vulgaris HOM05D000926 ORTHO05D000707 1.9e-06 55.8 88 40.9
Cpa.g.sc23.52 Carica papaya HOM05D000926 ORTHO05D000707 1.9e-06 55.8 84 41.7
CiPaw.03G077200 Carya illinoinensis HOM05D000926 ORTHO05D000707 1.9e-06 55.8 80 42.5
CiPaw.03G080300 Carya illinoinensis HOM05D000926 ORTHO05D000707 1.9e-06 55.8 84 42.9
Lsat_1_v5_gn_4_174621 Lactuca sativa HOM05D000926 ORTHO05D000707 1.9e-06 55.8 82 39.0
Manes.01G106100 Manihot esculenta HOM05D000926 ORTHO05D000707 1.9e-06 55.8 81 43.2
Nitab4.5_0005612g0030 Nicotiana tabacum HOM05D000926 ORTHO05D000707 1.9e-06 55.8 79 40.5
PGR042G1069 Punica granatum HOM05D000926 ORTHO05D000707 1.9e-06 55.8 75 42.7
Aqoxy7G02467 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 2.4e-06 55.5 80 45.0
AUR62023119 Chenopodium quinoa HOM05D000926 ORTHO05D000707 2.4e-06 55.5 90 41.1
Ca_13080_v3 Cicer arietinum L. HOM05D000926 ORTHO05D000707 2.4e-06 55.5 81 40.7
DCAR_002020 Daucus carota HOM05D000926 ORTHO05D000707 2.4e-06 55.5 77 42.9
Thhalv10026569m.g Eutrema salsugineum HOM05D000926 ORTHO05D000707 2.4e-06 55.5 76 40.8
Manes.02G062600 Manihot esculenta HOM05D000926 ORTHO05D000707 2.4e-06 55.5 77 42.9
TPR.G3243 Trifolium pratense HOM05D000926 ORTHO05D000707 2.4e-06 55.5 85 43.5
TPR.G38908 Trifolium pratense HOM05D000926 ORTHO05D000707 2.4e-06 55.5 75 41.3
ATR0580G037 Amborella trichopoda HOM05D000926 ORTHO05D000707 3.2e-06 55.1 80 43.8
Aqoxy3G00594 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 3.2e-06 55.1 78 41.0
BcaC06g32785 Brassica carinata HOM05D000926 ORTHO05D000707 3.2e-06 55.1 82 42.7
Glyma.05G017000 Glycine max HOM05D021696 ORTHO05D022751 3.2e-06 55.1 79 39.2
Gohir.A05G062600 Gossypium hirsutum HOM05D000926 ORTHO05D000707 3.2e-06 55.1 85 40.0
Gohir.D05G065100 Gossypium hirsutum HOM05D000926 ORTHO05D000707 3.2e-06 55.1 85 40.0
Aqoxy3G03797 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 4.2e-06 54.7 78 44.9
BraA03t14697Z Brassica rapa HOM05D000926 ORTHO05D000707 4.2e-06 54.7 82 42.7
Dinv33888 Davidia involucrata HOM05D000926 ORTHO05D000707 4.2e-06 54.7 85 42.4
Duzib187G1771 Durio zibethinus HOM05D000926 ORTHO05D000707 4.2e-06 54.7 85 41.2
HanXRQChr14g0447991 Helianthus annuus HOM05D000926 ORTHO05D000707 4.2e-06 54.7 82 37.8
AL7G27280 Arabidopsis lyrata HOM05D000926 ORTHO05D000707 5.4e-06 54.3 80 41.2
Medtr1g013410 Medicago truncatula HOM05D000926 ORTHO05D000707 5.4e-06 54.3 77 41.6
Nitab4.5_0002171g0020 Nicotiana tabacum HOM05D000926 ORTHO05D000707 5.4e-06 54.3 81 39.5
Oeu032515.1 Olea europaea HOM05D000926 ORTHO05D000707 5.4e-06 54.3 86 44.2
PSO170G4593 Papaver somniferum HOM05D000926 ORTHO05D000707 5.4e-06 54.3 82 43.9
Peaxi162Scf00479g00093 Petunia axillaris HOM05D000926 ORTHO05D000707 5.4e-06 54.3 89 39.3
Sp2g18220 Schrenkiella parvula HOM05D000926 ORTHO05D000707 5.4e-06 54.3 77 41.6
BcaC06g30841 Brassica carinata HOM05D000926 ORTHO05D000707 7.1e-06 53.9 84 41.7
BcaC06g33728 Brassica carinata HOM05D015998 ORTHO05D000707 7.1e-06 53.9 82 41.5
AUR62020304 Chenopodium quinoa HOM05D000926 ORTHO05D000707 7.1e-06 53.9 87 40.2
Glyma.04G058800 Glycine max HOM05D000926 ORTHO05D000707 7.1e-06 53.9 87 40.2
PSO210G5547 Papaver somniferum HOM05D000926 ORTHO05D000707 7.1e-06 53.9 82 43.9
Actinidia17614 Actinidia chinensis HOM05D000926 ORTHO05D000707 9.3e-06 53.5 78 39.7
Aa31LG11G4120 Aethionema arabicum HOM05D000926 ORTHO05D000707 9.3e-06 53.5 80 42.5
CDE04G3009 Ceratophyllum demersum HOM05D000926 ORTHO05D000707 9.3e-06 53.5 83 43.4
Ca_21193_v3 Cicer arietinum L. HOM05D000926 ORTHO05D000707 9.3e-06 53.5 91 40.7
Dinv42764 Davidia involucrata HOM05D000926 ORTHO05D000707 9.3e-06 53.5 84 41.7
Gohir.A07G178200 Gossypium hirsutum HOM05D000926 ORTHO05D000707 9.3e-06 53.5 89 38.2
Lalb_Chr21g0318771 Lupinus albus HOM05D000926 ORTHO05D000707 9.3e-06 53.5 78 41.0
PSO017G6561 Papaver somniferum HOM05D000926 ORTHO05D000707 9.3e-06 53.5 87 41.4


User provided reference genes

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