Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000151g0420 Nicotiana tabacum HOM05D000003 ORTHO05D011611 1.0e-165 586.6 293 100.0
Nitab4.5_0005442g0030 Nicotiana tabacum HOM05D000003 ORTHO05D011611 2.0e-36 157.1 166 48.2
Nitab4.5_0001519g0110 Nicotiana tabacum HOM05D000003 ORTHO05D000007 6.0e-33 145.6 135 53.3
Nitab4.5_0004011g0050 Nicotiana tabacum HOM05D000003 ORTHO05D011611 8.7e-32 141.7 167 47.3
Nitab4.5_0005861g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000007 2.5e-31 140.2 202 45.0
Nitab4.5_0000151g0430 Nicotiana tabacum HOM05D000003 ORTHO05D011611 3.8e-27 126.3 136 45.6
Sopen07g022300 Solanum pennellii HOM05D000003 ORTHO05D000007 1.4e-26 124.4 222 35.1
Nitab4.5_0005640g0020 Nicotiana tabacum HOM05D000003 ORTHO05D011611 3.5e-25 119.8 233 32.6
EL10Ac1g01948 Beta vulgaris HOM05D000003 ORTHO05D000006 7.9e-25 118.6 213 33.8
EL10Ac2g03240 Beta vulgaris HOM05D000045 ORTHO05D000695 3.0e-24 116.7 296 28.4
Nitab4.5_0003024g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000007 5.1e-24 115.9 216 35.6
EL10Ac6g14322 Beta vulgaris HOM05D000003 ORTHO05D000007 7.4e-23 112.1 215 28.8
CANSAT25G2390 Cannabis sativa HOM05D000003 ORTHO05D011611 2.2e-22 110.5 197 34.5
EL10Ac6g14081 Beta vulgaris HOM05D000003 ORTHO05D000007 3.7e-22 109.8 128 43.8
EL10Ac8g19433 Beta vulgaris HOM05D000003 ORTHO05D000007 6.3e-22 109.0 216 30.1
EL10Ac7g17172 Beta vulgaris HOM05D000003 ORTHO05D000007 1.8e-21 107.5 219 32.9
EL10Ac5g11620 Beta vulgaris HOM05D000003 ORTHO05D000007 2.4e-21 107.1 216 28.7
EL10Ac6g13827 Beta vulgaris HOM05D000003 ORTHO05D000007 2.4e-21 107.1 193 32.1
EL10Ac3g06546 Beta vulgaris HOM05D000003 ORTHO05D000007 9.0e-21 105.1 333 24.3
EL10Ac8g19445 Beta vulgaris HOM05D000003 ORTHO05D000007 1.5e-20 104.4 216 31.9
EL10Ac9g22997 Beta vulgaris HOM05D000003 ORTHO05D000007 4.5e-20 102.8 217 30.4
EL10Ac6g13748 Beta vulgaris HOM05D000003 ORTHO05D000007 5.9e-20 102.4 132 37.1
EL10Ac4g09212 Beta vulgaris HOM05D000003 ORTHO05D000007 7.7e-20 102.1 251 29.1
EL10Ac3g06400 Beta vulgaris HOM05D000003 ORTHO05D000007 1.0e-19 101.7 193 31.6
CANSAT11G0988 Cannabis sativa HOM05D000003 ORTHO05D000007 8.5e-19 98.6 200 32.5
EL10Ac1g02104 Beta vulgaris HOM05D000003 ORTHO05D011611 3.2e-18 96.7 72 62.5
CANSAT78G1995 Cannabis sativa HOM05D000003 ORTHO05D000007 4.2e-18 96.3 84 51.2
CANSAT01G1392 Cannabis sativa HOM05D000003 ORTHO05D000004 7.2e-18 95.5 341 24.6
CANSAT11G0526 Cannabis sativa HOM05D000003 ORTHO05D000007 9.4e-18 95.1 349 24.6
Ah.13g067160 Amaranthus hybridus HOM05D017406 ORTHO05D000007 1.2e-17 94.7 155 34.2
EL10Ac1g02040 Beta vulgaris HOM05D000003 ORTHO05D000007 1.6e-17 94.4 98 41.8
EL10Ac8g19738 Beta vulgaris HOM05D000003 ORTHO05D000007 1.6e-17 94.4 143 39.2
EL10As3g23356 Beta vulgaris HOM05D000003 ORTHO05D000007 1.6e-17 94.4 84 47.6
EL10Ac7g17199 Beta vulgaris HOM05D000003 ORTHO05D000007 2.1e-17 94.0 191 32.5
Hund08810 Selenicereus undatus HOM05D000003 ORTHO05D000007 2.7e-17 93.6 235 26.4
CANSAT21G1545 Cannabis sativa HOM05D000003 ORTHO05D000007 3.6e-17 93.2 264 25.4
CANSAT01G2288 Cannabis sativa HOM05D000003 ORTHO05D000006 4.6e-17 92.8 212 27.4
Hund10220 Selenicereus undatus HOM05D000003 ORTHO05D000007 7.9e-17 92.0 169 31.4
CANSAT01G0784 Cannabis sativa HOM05D000003 ORTHO05D000007 1.4e-16 91.3 84 47.6
EL10Ac8g19497 Beta vulgaris HOM05D000003 ORTHO05D000007 1.8e-16 90.9 91 42.9
CANSAT54G1048 Cannabis sativa HOM05D000003 ORTHO05D000007 1.8e-16 90.9 215 26.5
Ah.14g080910 Amaranthus hybridus HOM05D000003 ORTHO05D000007 2.3e-16 90.5 120 36.7
CANSAT01G0243 Cannabis sativa HOM05D000003 ORTHO05D000007 2.3e-16 90.5 140 35.0
CANSAT25G1254 Cannabis sativa HOM05D000003 ORTHO05D000007 2.3e-16 90.5 140 35.0
CANSAT56G3933 Cannabis sativa HOM05D000003 ORTHO05D000007 2.3e-16 90.5 104 40.4
CANSAT54G2202 Cannabis sativa HOM05D000003 ORTHO05D000007 5.1e-16 89.4 89 44.9
EL10Ac1g01965 Beta vulgaris HOM05D000003 ORTHO05D000007 8.8e-16 88.6 185 31.4
CANSAT01G0517 Cannabis sativa HOM05D000003 ORTHO05D000007 8.8e-16 88.6 84 41.7
CANSAT64G2710 Cannabis sativa HOM05D000003 ORTHO05D000007 8.8e-16 88.6 90 40.0
CANSAT78G1658 Cannabis sativa HOM05D000003 ORTHO05D000007 1.1e-15 88.2 78 51.3
CANSAT11G1056 Cannabis sativa HOM05D000003 ORTHO05D000007 1.5e-15 87.8 84 48.8
CANSAT25G3759 Cannabis sativa HOM05D000003 ORTHO05D000007 1.5e-15 87.8 84 48.8
Ah.12g063330 Amaranthus hybridus HOM05D000003 ORTHO05D000007 2.5e-15 87.0 83 45.8
EL10Ac5g11879 Beta vulgaris HOM05D000003 ORTHO05D000007 2.5e-15 87.0 252 25.0
Ah.08g222830 Amaranthus hybridus HOM05D005119 ORTHO05D006338 3.3e-15 86.7 83 45.8
CANSAT54G2456 Cannabis sativa HOM05D000003 ORTHO05D000007 3.3e-15 86.7 156 34.6
Ah.10g029790 Amaranthus hybridus HOM05D000003 ORTHO05D000007 5.7e-15 85.9 84 44.0
Ah.12g061560 Amaranthus hybridus HOM05D000003 ORTHO05D000007 5.7e-15 85.9 217 25.3
CANSAT54G2645 Cannabis sativa HOM05D000003 ORTHO05D000007 5.7e-15 85.9 84 41.7
Nitab4.5_0002525g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000007 5.7e-15 85.9 54 68.5
Hund31250 Selenicereus undatus HOM05D014118 ORTHO05D011611 5.7e-15 85.9 83 44.6
EL10Ac6g14808 Beta vulgaris HOM05D000003 ORTHO05D000007 1.7e-14 84.3 107 35.5
CANSAT25G1407 Cannabis sativa HOM05D000003 ORTHO05D000007 1.7e-14 84.3 84 47.6
CANSAT35G0925 Cannabis sativa HOM05D000003 ORTHO05D000007 2.2e-14 84.0 84 45.2
EL10Ac6g14497 Beta vulgaris HOM05D000003 ORTHO05D000007 3.7e-14 83.2 168 30.4
CANSAT80G0090 Cannabis sativa HOM05D000003 ORTHO05D000007 3.7e-14 83.2 90 42.2
CAN.G1463.3 Capsicum annuum HOM05D000479 ORTHO05D000007 3.7e-14 83.2 83 42.2
Hund10169 Selenicereus undatus HOM05D000185 ORTHO05D000105 4.8e-14 82.8 123 37.4
EL10Ac3g06704 Beta vulgaris HOM05D000003 ORTHO05D000007 8.2e-14 82.0 84 45.2
CANSAT25G2441 Cannabis sativa HOM05D000003 ORTHO05D000007 8.2e-14 82.0 266 27.4
Ah.03g143450 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.1e-13 81.6 199 24.6
CANSAT65G0002 Cannabis sativa HOM05D000003 ORTHO05D000007 1.1e-13 81.6 262 25.6
Ah.10g026810 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.4e-13 81.3 100 35.0
CAN.G551.108 Capsicum annuum HOM05D002280 ORTHO05D011611 1.8e-13 80.9 83 39.8
CANSAT11G0663 Cannabis sativa HOM05D000004 ORTHO05D000034 3.1e-13 80.1 71 47.9
Ah.15g097110 Amaranthus hybridus HOM05D000003 ORTHO05D000007 4.1e-13 79.7 263 24.7
Sopen03g020920 Solanum pennellii HOM05D015165 ORTHO05D017089 4.1e-13 79.7 123 37.4
PGSC0003DMG400035899 Solanum tuberosum HOM05D000003 ORTHO05D000007 5.3e-13 79.3 82 42.7
Hund23554 Selenicereus undatus HOM05D000003 ORTHO05D011611 6.9e-13 79.0 78 46.2
Ah.04g159630 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.2e-12 78.2 97 37.1
CANSAT56G0142 Cannabis sativa HOM05D000003 ORTHO05D000007 1.2e-12 78.2 67 47.8
Solyc03g078190.1 Solanum lycopersicum HOM05D015165 ORTHO05D017089 1.2e-12 78.2 123 36.6
CANSAT11G2544 Cannabis sativa HOM05D000003 ORTHO05D000007 1.5e-12 77.8 184 26.1
CAN.G265.4 Capsicum annuum HOM05D015165 ORTHO05D011611 2.0e-12 77.4 150 29.3
CANSAT01G1178 Cannabis sativa HOM05D000003 ORTHO05D000007 3.4e-12 76.6 90 38.9
EL10Ac1g02231 Beta vulgaris HOM05D000003 ORTHO05D000007 7.7e-12 75.5 69 49.3
Dinv18035 Davidia involucrata HOM05D000003 ORTHO05D000006 7.7e-12 75.5 193 30.6
Nitab4.5_0009090g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.7e-11 74.3 160 31.2
EL10Ac3g05991 Beta vulgaris HOM05D015602 ORTHO05D006373 3.8e-11 73.2 78 44.9
Ah.11g040280 Amaranthus hybridus HOM05D000003 ORTHO05D011611 8.5e-11 72.0 65 47.7
EL10Ac1g01519 Beta vulgaris HOM05D000003 ORTHO05D000007 8.5e-11 72.0 79 40.5
EL10Ac2g02962 Beta vulgaris HOM05D000003 ORTHO05D000007 1.1e-10 71.6 107 35.5
EL10Ac6g14708 Beta vulgaris HOM05D000003 ORTHO05D000007 1.9e-10 70.9 122 34.4
EL10Ac7g17161 Beta vulgaris HOM05D000003 ORTHO05D000007 5.5e-10 69.3 182 25.8
EL10Ac1g01488 Beta vulgaris HOM05D000003 ORTHO05D000007 9.4e-10 68.6 215 22.8
Ah.02g122310 Amaranthus hybridus HOM05D000003 ORTHO05D000007 2.7e-09 67.0 86 33.7
CANSAT35G1564 Cannabis sativa HOM05D000003 ORTHO05D000007 2.7e-09 67.0 90 32.2
Solyc10g075080.1 Solanum lycopersicum HOM05D015165 ORTHO05D011611 2.7e-09 67.0 125 32.8
AUR62043420 Chenopodium quinoa HOM05D000003 ORTHO05D000007 3.6e-09 66.6 255 22.7
EL10As3g23362 Beta vulgaris HOM05D000003 ORTHO05D000007 4.7e-09 66.2 174 25.3
Dinv11629 Davidia involucrata HOM05D000003 ORTHO05D000007 1.8e-08 64.3 235 24.7
Lj5C183T7 Lonicera japonica HOM05D001140 ORTHO05D000470 1.8e-08 64.3 161 26.1
Nitab4.5_0000960g0200 Nicotiana tabacum HOM05D010714 ORTHO05D000007 2.3e-08 63.9 140 33.6
Sopen05g026260 Solanum pennellii HOM05D000003 ORTHO05D000007 3.9e-08 63.2 144 27.1
Dinv23885 Davidia involucrata HOM05D000003 ORTHO05D000007 6.7e-08 62.4 116 31.0
Nitab4.5_0003087g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000007 6.7e-08 62.4 74 47.3
Dinv20159 Davidia involucrata HOM05D000041 ORTHO05D000007 1.1e-07 61.6 78 37.2
Lj3A1025T53 Lonicera japonica HOM05D000003 ORTHO05D000007 1.1e-07 61.6 141 33.3
Sabra01G0088000 Salix brachista HOM05D000003 ORTHO05D000007 1.5e-07 61.2 145 27.6
Dinv18497 Davidia involucrata HOM05D000003 ORTHO05D000007 2.6e-07 60.5 84 34.5
Dinv39840 Davidia involucrata HOM05D000003 ORTHO05D000007 2.6e-07 60.5 90 34.4
Dinv08220 Davidia involucrata HOM05D015957 ORTHO05D000007 3.3e-07 60.1 166 28.3
Dinv18316 Davidia involucrata HOM05D000003 ORTHO05D000007 3.3e-07 60.1 211 25.1
Dinv31264 Davidia involucrata HOM05D000003 ORTHO05D000007 3.3e-07 60.1 78 34.6
Dinv36847 Davidia involucrata HOM05D000003 ORTHO05D000007 3.3e-07 60.1 148 29.1
Nitab4.5_0000005g0160 Nicotiana tabacum HOM05D000003 ORTHO05D284394 3.3e-07 60.1 69 42.0
Dinv19394 Davidia involucrata HOM05D000243 ORTHO05D000007 4.4e-07 59.7 135 30.4
Hund10601 Selenicereus undatus HOM05D010531 ORTHO05D000105 5.7e-07 59.3 52 55.8
EL10Ac2g03788 Beta vulgaris HOM05D000003 ORTHO05D000007 9.7e-07 58.5 53 45.3
Peaxi162Scf00087g00091 Petunia axillaris HOM05D000003 ORTHO05D000007 1.3e-06 58.2 211 20.9
Dinv10255 Davidia involucrata HOM05D000003 ORTHO05D000007 1.7e-06 57.8 76 36.8
Dinv44147 Davidia involucrata HOM05D000003 ORTHO05D000007 1.7e-06 57.8 134 29.9
ECA238G2727 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.7e-06 57.8 224 26.3
ECA238G3988 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.2e-06 57.4 224 25.9
EL10Ac4g08483 Beta vulgaris HOM05D000003 ORTHO05D000007 2.8e-06 57.0 69 40.6
Hund00727 Selenicereus undatus HOM05D063244 ORTHO05D011611 3.7e-06 56.6 43 48.8
Nitab4.5_0001335g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000007 4.8e-06 56.2 80 32.5
Nitab4.5_0003690g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000007 6.3e-06 55.8 167 24.0


User provided reference genes

Program Settings