Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000146g0110 Nicotiana tabacum HOM05D000641 ORTHO05D008820 1.9e-93 345.9 180 100.0
Nitab4.5_0003018g0010 Nicotiana tabacum HOM05D000641 ORTHO05D008820 1.2e-47 193.7 232 51.7
Nitab4.5_0000146g0120 Nicotiana tabacum HOM05D000641 ORTHO05D008820 2.0e-47 193.0 193 57.5
Nitab4.5_0001090g0030 Nicotiana tabacum HOM05D000641 ORTHO05D008820 9.4e-45 184.1 232 49.6
Peaxi162Scf00132g00729 Petunia axillaris HOM05D000641 ORTHO05D008820 6.5e-38 161.4 247 44.9
CAN.G248.59 Capsicum annuum HOM05D000641 ORTHO05D008820 1.6e-31 140.2 284 39.8
Solyc07g054390.1 Solanum lycopersicum HOM05D000641 ORTHO05D008820 2.3e-30 136.3 191 44.0
PGSC0003DMG400018319 Solanum tuberosum HOM05D000641 ORTHO05D008820 1.9e-29 133.3 194 44.3
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 4.2e-29 132.1 194 43.8
Cc05_g06430 Coffea canephora HOM05D000641 ORTHO05D008820 3.8e-22 109.0 226 38.1
Dinv23702 Davidia involucrata HOM05D000641 ORTHO05D008820 4.7e-20 102.1 216 35.6
Oeu005830.1 Olea europaea HOM05D000641 ORTHO05D008820 4.0e-19 99.0 188 36.2
Migut.H01022 Erythranthe guttata HOM05D000641 ORTHO05D008820 5.2e-19 98.6 186 36.0
Oeu032188.1 Olea europaea HOM05D000641 ORTHO05D008820 8.9e-19 97.8 188 39.4
Manes.05G121400 Manihot esculenta HOM05D000641 ORTHO05D008820 4.1e-16 89.0 211 32.7
RcHm_v2.0_Chr2g0161991 Rosa chinensis HOM05D000641 ORTHO05D008820 3.5e-15 85.9 222 29.3
TAR624G1068 Trochodendron aralioides HOM05D000641 ORTHO05D008820 7.8e-15 84.7 232 29.7
GSVIVG01030582001 Vitis vinifera HOM05D000641 ORTHO05D008820 7.8e-15 84.7 219 33.8
Thecc.02G172500 Theobroma cacao HOM05D000641 ORTHO05D008820 1.0e-14 84.3 215 33.0
MD09G1092900 Malus domestica HOM05D000641 ORTHO05D008820 5.0e-14 82.0 220 30.9
Sabra13G0117900 Salix brachista HOM05D000641 ORTHO05D008820 5.0e-14 82.0 230 31.3
FAN14G1122 Fragaria x ananassa HOM05D000641 ORTHO05D008820 1.5e-13 80.5 196 30.1
Ciclev10017570m.g Citrus clementina HOM05D000641 ORTHO05D008820 1.9e-13 80.1 217 30.4
Duzib248G0813 Durio zibethinus HOM05D000641 ORTHO05D008820 2.5e-13 79.7 214 33.2
Atru.chr6.3062 Acer truncatum HOM05D000641 ORTHO05D008820 3.3e-13 79.3 195 32.3
Potri.013G146100 Populus trichocarpa HOM05D000641 ORTHO05D008820 3.3e-13 79.3 237 30.4
FAN05G1593 Fragaria x ananassa HOM05D000641 ORTHO05D008820 2.8e-12 76.3 199 30.2
MD17G1083000 Malus domestica HOM05D000641 ORTHO05D008820 6.2e-12 75.1 219 29.2
TWI36G0041 Tripterygium wilfordii HOM05D000641 ORTHO05D008820 6.2e-12 75.1 218 31.7
FAN02G0524 Fragaria x ananassa HOM05D000641 ORTHO05D008820 8.0e-12 74.7 199 29.1
Gohir.A12G136800 Gossypium hirsutum HOM05D000641 ORTHO05D008820 8.0e-12 74.7 190 32.1
ClCG02G017370 Citrullus lanatus HOM05D000641 ORTHO05D008820 1.8e-11 73.6 222 28.4
SGA_v2.0_scaffold159G37628 Striga asiatica HOM05D000641 ORTHO05D008820 3.1e-11 72.8 168 37.5
Cfa014550 Carpinus fangiana HOM05D000641 ORTHO05D008820 5.2e-11 72.0 194 31.4
Dinv15478 Davidia involucrata HOM05D000492 ORTHO05D008820 5.2e-11 72.0 92 42.4
Lj3g0000685 Lotus japonicus HOM05D000641 ORTHO05D008820 5.2e-11 72.0 73 47.9
Gorai.008G152100 Gossypium raimondii HOM05D000641 ORTHO05D008820 8.9e-11 71.2 190 31.6
Sed0008278 Sechium edule HOM05D000641 ORTHO05D008820 8.9e-11 71.2 196 27.0
Gohir.D12G140801 Gossypium hirsutum HOM05D000492 ORTHO05D000499 1.2e-10 70.9 190 31.6
QL08p037487 Quercus lobata HOM05D000641 ORTHO05D008820 1.5e-10 70.5 195 30.3
Eucgr.A01785 Eucalyptus grandis HOM05D000641 ORTHO05D008820 2.0e-10 70.1 199 29.6
Psat5g270000 Pisum sativum HOM05D000641 ORTHO05D008820 4.4e-10 68.9 127 31.5
Prupe.3G232200 Prunus persica HOM05D000641 ORTHO05D008820 4.4e-10 68.9 196 29.1
arahy.Tifrunner.gnm1.ann1.RA1C4M Arachis hypogaea HOM05D000641 ORTHO05D008820 7.5e-10 68.2 197 27.9
PGSC0003DMG400014122 Solanum tuberosum HOM05D000641 ORTHO05D008820 9.8e-10 67.8 58 67.2
arahy.Tifrunner.gnm1.ann1.ATG8WK Arachis hypogaea HOM05D000641 ORTHO05D008820 1.3e-09 67.4 198 27.3
Ca_01534_v3 Cicer arietinum L. HOM05D000641 ORTHO05D008820 1.3e-09 67.4 218 25.7
Actinidia39298 Actinidia chinensis HOM05D000641 ORTHO05D008820 1.7e-09 67.0 67 50.7
DCAR_012985 Daucus carota HOM05D000641 ORTHO05D008820 1.7e-09 67.0 59 52.5
TPR.G27112 Trifolium pratense HOM05D000641 ORTHO05D008820 2.9e-09 66.2 163 29.4
AT2G20815 Arabidopsis thaliana HOM05D000641 ORTHO05D008820 2.4e-08 63.2 56 51.8
Cpa.g.sc34.106 Carica papaya HOM05D000641 ORTHO05D008820 4.1e-08 62.4 193 29.5
Lsat_1_v5_gn_4_70320 Lactuca sativa HOM05D000641 ORTHO05D008820 4.1e-08 62.4 166 31.3
PGR042G3402 Punica granatum HOM05D000641 ORTHO05D008820 5.4e-08 62.0 135 34.8
CiPaw.04G123000 Carya illinoinensis HOM05D000641 ORTHO05D008820 7.0e-08 61.6 121 38.0
Medtr2g090050 Medicago truncatula HOM05D000641 ORTHO05D008820 7.0e-08 61.6 166 29.5
ECA234G0295 Erigeron canadensis HOM05D000492 ORTHO05D000499 1.2e-07 60.8 158 29.1
BraA07t27788Z Brassica rapa HOM05D000641 ORTHO05D008820 2.0e-07 60.1 72 40.3
Lj3g0004709 Lotus japonicus HOM05D000641 ORTHO05D008820 2.0e-07 60.1 69 43.5
CsaV3_6G012470 Cucumis sativus L. HOM05D000641 ORTHO05D008820 2.7e-07 59.7 199 25.1
MBI02_g35905_MAGBIO Magnolia biondii HOM05D000641 ORTHO05D008820 2.7e-07 59.7 200 30.0
Glyma.06G298000 Glycine max HOM05D000641 ORTHO05D008820 3.5e-07 59.3 199 29.1
Lalb_Chr14g0366661 Lupinus albus HOM05D000641 ORTHO05D008820 3.5e-07 59.3 66 48.5
PSO675G1637 Papaver somniferum HOM05D000641 ORTHO05D008820 3.5e-07 59.3 95 41.1
SalBow1G7770 Salvia bowleyana HOM05D000641 ORTHO05D008820 3.5e-07 59.3 231 26.4
BcaC06g36770 Brassica carinata HOM05D000641 ORTHO05D008820 6.0e-07 58.5 72 40.3
C07p00120 Brassica napus HOM05D000641 ORTHO05D008820 6.0e-07 58.5 72 40.3
BolC7t40463H Brassica oleracea HOM05D000641 ORTHO05D008820 6.0e-07 58.5 72 40.3
Carub.0003s3539 Capsella rubella HOM05D000641 ORTHO05D008820 6.0e-07 58.5 58 46.6
Sed0017549 Sechium edule HOM05D000641 ORTHO05D008820 6.0e-07 58.5 195 24.6
AL3G53930 Arabidopsis lyrata HOM05D000641 ORTHO05D008820 7.8e-07 58.2 58 44.8
ECA246G0759 Erigeron canadensis HOM05D000492 ORTHO05D008820 7.8e-07 58.2 165 32.7
Lj2g0015341 Lotus japonicus HOM05D000641 ORTHO05D008820 7.8e-07 58.2 142 33.1
PSO541G2384 Papaver somniferum HOM05D000641 ORTHO05D008820 1.0e-06 57.8 107 37.4
unitig_0.g954 Utricularia gibba HOM05D000641 ORTHO05D000944 1.0e-06 57.8 53 49.1
Aqoxy1G02752 Aquilegia oxysepala HOM05D000641 ORTHO05D008820 1.3e-06 57.4 145 34.5
MELO3C013532.2 Cucumis melo HOM05D000641 ORTHO05D008820 1.3e-06 57.4 127 28.3
CANSAT64G1209 Cannabis sativa HOM05D000641 ORTHO05D008820 1.7e-06 57.0 249 25.3
Phvul.011G112000 Phaseolus vulgaris HOM05D000641 ORTHO05D008820 1.7e-06 57.0 119 35.3
Glyma.13G300600 Glycine max HOM05D000641 ORTHO05D008820 2.3e-06 56.6 91 40.7
CARHR111500 Cardamine hirsuta HOM05D000641 ORTHO05D008820 3.0e-06 56.2 58 41.4
CDE06G1215 Ceratophyllum demersum HOM05D000222 ORTHO05D000329 3.0e-06 56.2 105 39.0
Glyma.12G107200 Glycine max HOM05D000641 ORTHO05D008820 3.0e-06 56.2 193 31.6
Actinidia30485 Actinidia chinensis HOM05D000641 ORTHO05D008820 3.9e-06 55.8 53 49.1
HanXRQChr17g0542491 Helianthus annuus HOM05D000641 ORTHO05D008820 3.9e-06 55.8 170 30.6
Nn1g03917 Nelumbo nucifera HOM05D000641 ORTHO05D008820 5.0e-06 55.5 158 29.7
Sc21g0002450 Simmondsia chinensis HOM05D000641 ORTHO05D008820 5.0e-06 55.5 163 28.8
VMungo1080G1510 Vigna mungo HOM05D000641 ORTHO05D009503 8.6e-06 54.7 118 29.7


User provided reference genes

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