Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 4.0e-103 378.3 212 100.0
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 3.8e-93 345.1 212 92.5
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 3.4e-78 295.4 215 81.9
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 7.6e-78 294.3 215 81.4
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 7.6e-78 294.3 215 81.4
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 2.4e-76 289.3 214 78.0
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 1.9e-52 209.9 150 84.0
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 3.2e-52 209.1 218 61.5
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 4.2e-52 208.8 178 69.1
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 1.4e-50 203.8 215 58.1
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 2.3e-50 203.0 218 56.4
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 5.7e-49 198.4 227 56.8
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 4.8e-48 195.3 214 57.5
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 6.3e-48 194.9 211 55.9
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 6.9e-47 191.4 194 59.8
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 9.1e-47 191.0 215 57.2
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 1.5e-46 190.3 179 64.2
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 3.4e-46 189.1 190 56.3
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 3.4e-46 189.1 214 53.7
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 4.5e-46 188.7 214 56.1
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 7.7e-46 188.0 215 55.3
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 2.2e-45 186.4 212 53.3
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 6.5e-45 184.9 194 54.1
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 8.5e-45 184.5 212 56.1
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 1.1e-44 184.1 223 54.7
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 1.1e-44 184.1 221 56.6
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 1.4e-44 183.7 180 56.1
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 1.4e-44 183.7 216 54.2
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 1.4e-44 183.7 214 56.5
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 4.2e-44 182.2 217 59.0
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 5.5e-44 181.8 221 55.7
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 7.2e-44 181.4 217 56.7
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 7.2e-44 181.4 219 53.9
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 1.2e-43 180.6 218 54.6
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 2.1e-43 179.9 217 53.9
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 2.7e-43 179.5 219 49.3
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 4.7e-43 178.7 217 55.8
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 4.7e-43 178.7 217 55.3
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 4.7e-43 178.7 217 55.3
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 7.9e-43 177.9 271 46.1
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 7.9e-43 177.9 214 50.0
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 1.4e-42 177.2 220 50.0
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 8.8e-42 174.5 176 54.5
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 2.6e-41 172.9 213 52.6
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 7.4e-41 171.4 208 53.8
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 1.3e-40 170.6 177 57.6
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 3.7e-40 169.1 181 53.6
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 1.4e-39 167.2 217 50.7
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 2.4e-39 166.4 167 59.9
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 2.4e-39 166.4 219 47.0
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 9.1e-39 164.5 211 52.6
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 1.2e-38 164.1 184 55.4
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 7.7e-38 161.4 213 51.2
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 7.7e-38 161.4 156 60.9
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 2.9e-37 159.5 210 52.9
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 8.5e-37 157.9 216 44.4
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 3.2e-36 156.0 149 63.8
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 4.2e-36 155.6 214 52.3
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 2.1e-35 153.3 181 49.7
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 2.7e-35 152.9 176 55.1
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 3.6e-35 152.5 178 55.6
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 5.2e-34 148.7 224 44.6
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 6.7e-34 148.3 174 51.7
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 1.5e-33 147.1 180 48.3
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 1.3e-32 144.1 178 56.7
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 1.3e-32 144.1 178 56.7
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 3.7e-32 142.5 155 54.8
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 3.7e-32 142.5 176 56.8
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 3.7e-32 142.5 164 54.3
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 6.3e-32 141.7 149 61.1
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 1.1e-31 141.0 147 55.8
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 1.8e-31 140.2 145 62.1
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 5.3e-31 138.7 167 53.3
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 2.0e-30 136.7 163 54.0
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 7.7e-30 134.8 199 43.2
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 2.2e-29 133.3 224 45.1
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 2.2e-29 133.3 178 44.9
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 2.9e-29 132.9 194 50.5
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 5.0e-29 132.1 223 46.6
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 1.1e-28 131.0 177 47.5
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 1.5e-28 130.6 192 51.6
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 2.5e-28 129.8 176 54.0
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 2.5e-28 129.8 192 49.0
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 2.5e-28 129.8 192 49.0
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 7.2e-28 128.3 166 52.4
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 2.7e-27 126.3 177 49.7
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 2.7e-27 126.3 177 49.7
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 3.0e-26 122.9 161 52.2
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 4.0e-26 122.5 159 54.7
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 8.8e-26 121.3 103 63.1
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 2.6e-25 119.8 172 46.5
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 4.4e-25 119.0 146 47.9
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 5.7e-25 118.6 152 45.4
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 3.8e-21 105.9 97 55.7
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 5.0e-21 105.5 146 51.4
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 2.3e-18 96.7 149 53.7
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 5.2e-18 95.5 178 38.2
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 2.8e-16 89.7 135 46.7
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 5.4e-15 85.5 102 47.1
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 5.4e-15 85.5 102 47.1
AUR62021857 Chenopodium quinoa HOM05D007192 ORTHO05D009034 1.0e-13 81.3 192 31.2
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 2.9e-13 79.7 215 29.3
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 3.6e-11 72.8 149 36.2
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 4.7e-11 72.4 222 30.6
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 2.6e-09 66.6 190 34.2
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 4.4e-09 65.9 174 40.8
Mapoly0007s0283 Marchantia polymorpha HOM05D007192 ORTHO05D009034 1.2e-06 57.8 164 37.8
Mapoly0252s0005 Marchantia polymorpha HOM05D007192 ORTHO05D009034 1.2e-06 57.8 164 37.8


User provided reference genes

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