Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 2.0e-80 302.4 149 100.0
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 1.3e-60 236.5 226 60.2
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 7.3e-43 177.6 244 46.3
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 5.4e-30 134.8 211 39.8
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 1.0e-28 130.6 231 39.8
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 1.7e-28 129.8 220 40.5
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 8.7e-28 127.5 232 40.1
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 8.7e-28 127.5 232 40.5
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 1.2e-24 117.1 170 41.8
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 1.5e-24 116.7 196 36.2
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 2.9e-23 112.5 200 37.0
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 2.4e-22 109.4 232 34.9
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 4.2e-22 108.6 234 32.5
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 1.2e-21 107.1 242 33.9
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 4.6e-21 105.1 187 34.8
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 4.6e-21 105.1 265 30.2
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.3e-20 103.6 230 32.6
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 5.1e-20 101.7 222 31.5
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 1.9e-19 99.8 196 33.7
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 5.6e-19 98.2 246 30.5
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 9.6e-19 97.4 233 32.2
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 1.3e-18 97.1 223 29.6
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 1.3e-18 97.1 244 32.0
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 2.1e-18 96.3 247 30.4
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 2.1e-18 96.3 233 33.0
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 3.6e-18 95.5 225 29.8
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 4.8e-18 95.1 199 31.7
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.1e-17 94.0 256 29.3
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 1.4e-17 93.6 235 30.2
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 2.4e-17 92.8 183 32.8
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 3.1e-17 92.4 59 67.8
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 5.3e-17 91.7 228 30.3
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 6.9e-17 91.3 244 30.7
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 9.0e-17 90.9 108 47.2
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.2e-16 90.5 110 45.5
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 3.4e-16 89.0 110 45.5
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 4.5e-16 88.6 86 46.5
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 7.6e-16 87.8 74 54.1
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 9.9e-16 87.4 110 43.6
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 9.9e-16 87.4 110 47.3
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 2.9e-15 85.9 248 29.8
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 6.4e-15 84.7 221 29.0
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 6.4e-15 84.7 59 61.0
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 1.1e-14 84.0 221 31.2
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 1.4e-14 83.6 247 30.4
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 1.4e-14 83.6 205 30.7
Peaxi162Scf00363g00724 Petunia axillaris HOM05D007631 ORTHO05D009566 1.9e-14 83.2 46 87.0
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 4.2e-14 82.0 219 28.3
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 5.4e-14 81.6 180 31.7
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 1.6e-13 80.1 192 30.7
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 1.6e-13 80.1 181 29.8
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 2.1e-13 79.7 249 28.1
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 2.7e-13 79.3 117 43.6
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 3.5e-13 79.0 72 55.6
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 7.9e-13 77.8 50 68.0
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 1.0e-12 77.4 193 28.0
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 1.8e-12 76.6 56 55.4
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 1.8e-12 76.6 213 27.7
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 1.8e-12 76.6 71 49.3
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 2.3e-12 76.3 182 28.6
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 2.3e-12 76.3 71 49.3
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 2.3e-12 76.3 179 28.5
SGA_v2.0_scaffold88G27234 Striga asiatica HOM05D007631 ORTHO05D009566 2.3e-12 76.3 101 45.5
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 2.3e-12 76.3 61 52.5
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 3.0e-12 75.9 55 60.0
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 5.1e-12 75.1 180 27.8
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 5.1e-12 75.1 190 28.4
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 6.7e-12 74.7 108 43.5
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 1.1e-11 73.9 249 28.9
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 1.1e-11 73.9 178 27.5
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 4.3e-11 72.0 99 39.4
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 1.6e-10 70.1 81 51.9
arahy.Tifrunner.gnm1.ann1.GZ47R7 Arachis hypogaea HOM05D007631 ORTHO05D009566 1.6e-10 70.1 119 42.0
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 3.7e-10 68.9 68 54.4
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 3.7e-10 68.9 209 27.3
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 3.7e-10 68.9 123 36.6
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 8.1e-10 67.8 181 26.5
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 8.1e-10 67.8 181 26.5
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 8.1e-10 67.8 181 26.5
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 8.1e-10 67.8 181 26.5
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 1.4e-09 67.0 180 27.2
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 3.1e-09 65.9 57 49.1
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 5.3e-09 65.1 124 37.9
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 1.5e-08 63.5 59 49.2
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 2.2e-07 59.7 51 52.9
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 2.2e-07 59.7 47 66.0
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 8.4e-07 57.8 206 25.2


User provided reference genes

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